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Title: Novel compound heterozygous CPLANE1 variants identified in a Chinese family with Joubert syndrome

Journal Article · · International Journal of Developmental Neuroscience
DOI: https://doi.org/10.1002/jdn.10135 · OSTI ID:1823478
 [1];  [2];  [3];  [2];  [4]
  1. Department of Neurology The Eleventh Clinical Medical College of Qingdao University, Linyi People’s Hospital Linyi China, Medical Genetic Department The Affiliated Hospital of Qingdao University Qingdao China
  2. Department of Neurology The Eleventh Clinical Medical College of Qingdao University, Linyi People’s Hospital Linyi China
  3. Department of Geriatric Medicine The Affiliated Hospital of Qingdao University Qingdao China
  4. Medical Genetic Department The Affiliated Hospital of Qingdao University Qingdao China

Abstract Joubert syndrome (JS) and JS‐related disorders (JSRD) are a group of neurodevelopmental diseases that share the “molar tooth sign” on axial brain magnetic resonance imaging (MRI), accompanied by cerebellar vermis hypoplasia, ataxia, hypotonia, and developmental delay. To identify variants responsible for the clinical symptoms of a Chinese family with JS and to explore the genotype–phenotype associations, we conducted a series of clinical examinations, including blood tests, brain MRI scans, ultrasound imaging, and ophthalmologic examination. Genomic DNA was extracted from the peripheral blood of the six‐person family, and the pathogenic variants were detected by whole‐exome sequencing (WES) and verified by Sanger sequencing. WES revealed two novel compound heterozygous variants in CPLANE1 : c.1270C>T (p.Arg424*) in exon 10 and c.8901C>A (p.Tyr2967*) in exon 48 of one child, inherited from each parent. Both variants were absent in ethnically matched Chinese control individuals and were either absent or present at very low frequencies in public databases, suggesting that these variants could be the pathogenic triggers of the JS phenotype. Notably, these CPLANE1 sequence variants were related to the pathogenesis of autosomal recessive JS in this study. The newly discovered variants expand the mutation spectrum of CPLANE1 , which assists in understanding the molecular mechanism underlying JS and improving the recognition of genetic counseling, particularly for families with a history of autosomal recessive JS.

Sponsoring Organization:
USDOE
OSTI ID:
1823478
Journal Information:
International Journal of Developmental Neuroscience, Journal Name: International Journal of Developmental Neuroscience Journal Issue: 6 Vol. 81; ISSN 0736-5748
Publisher:
Wiley Blackwell (John Wiley & Sons)Copyright Statement
Country of Publication:
Country unknown/Code not available
Language:
English

References (26)

Exome sequencing identifies a homozygous C5orf42 variant in a Turkish kindred with oral-facial-digital syndrome type VI journal April 2015
Extraciliary roles of the ciliopathy protein JBTS17 in mitosis and neurogenesis journal May 2019
Four novel compound heterozygous mutations in C5orf42 gene in patients with pure and mild Joubert syndrome journal July 2020
Broad spectrum identification of SUMO substrates in melanoma cells journal June 2007
C5orf42 is the major gene responsible for OFD syndrome type VI journal November 2013
Oral-facial-digital syndrome type VI: is C5orf42 really the major gene? journal November 2014
Mutations in C5ORF42 Cause Joubert Syndrome in the French Canadian Population journal April 2012
DNA analysis of AHI1, NPHP1 and CYCLIN D1 in Joubert syndrome patients from the Netherlands journal January 2008
Novel mutations in the ciliopathy-associated gene CPLANE1 (C5orf42) cause OFD syndrome type VI rather than Joubert syndrome journal October 2018
Neuroimaging findings in Joubert syndrome with C5orf42 gene mutations: A milder form of molar tooth sign and vermian hypoplasia journal May 2017
Phenotypic spectrum and prevalence of INPP5E mutations in Joubert Syndrome and related disorders journal February 2013
Joubert syndrome: genotyping a Northern European patient cohort journal April 2015
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology journal March 2015
Molecular genetic findings and clinical correlations in 100 patients with Joubert syndrome and related disorders prospectively evaluated at a single center journal January 2017
Exome sequencing identifies novel mutations in C5orf42 in patients with Joubert syndrome with oral–facial–digital anomalies journal November 2015
The ciliopathy-associated CPLANE proteins direct basal body recruitment of intraflagellar transport machinery journal May 2016
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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data journal July 2010
Joubert syndrome: a model for untangling recessive disorders with extreme genetic heterogeneity journal June 2015
Prenatal Diagnosis and Genetic Analysis of a Fetus with Joubert Syndrome journal May 2018
Joubert Syndrome and related disorders journal July 2010
The molecular genetics of Joubert syndrome and related ciliopathies: The challenges of genetic and phenotypic heterogeneity journal July 2019
Joubert syndrome and related disorders journal January 2012

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