Grafting metal complexes onto amorphous supports: from elementary steps to catalyst site populations via kernel regression
Abstract
Ab initio computational studies have made tremendous progress in describing the behavior of molecular (homogeneous) catalysts and crystalline versions of heterogeneous catalysts, but not for amorphous heterogeneous catalysts. Even widely used industrial amorphous catalysts like atomically dispersed Cr on silica remain poorly understood and largely intractable to computational investigation. The central problems are that (i) the amorphous support presents an unknown quenched disordered structure, (ii) metal atoms attach to various surface grafting sites with different rates, and (iii) the resulting grafted sites have different activation and catalytic reaction kinetics. This study combines kernel regression and importance sampling techniques to efficiently model grafting of metal ions onto a non-uniform ensemble of support environments. Our analysis uses a simple model of the quenched disordered support environment, grafting chemistry, and catalytic activity of the resulting grafted sites.
- Authors:
-
- Univ. of California, Santa Barbara, CA (United States). Dept. of Chemical Engineering
- Univ. of California, Santa Barbara, CA (United States). Dept. of Chemical Engineering. Dept. of Chemistry & Biochemistry
- Univ. of Illinois at Urbana-Champaign, IL (United States). Dept. of Chemical & Biomolecular Engineering. Dept. of Chemistry
- Publication Date:
- Research Org.:
- Univ. of California, Santa Barbara, CA (United States); Univ. of Kansas, Lawrence, KS (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES)
- OSTI Identifier:
- 1800093
- Alternate Identifier(s):
- OSTI ID: 1575096
- Grant/Contract Number:
- FG02-03ER15467; SC0019488; 1725797; 1605867
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Reaction Chemistry & Engineering
- Additional Journal Information:
- Journal Volume: 5; Journal Issue: 1; Journal ID: ISSN 2058-9883
- Publisher:
- Royal Society of Chemistry
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
Citation Formats
Khan, Salman A., Vandervelden, Craig A., Scott, Susannah L., and Peters, Baron. Grafting metal complexes onto amorphous supports: from elementary steps to catalyst site populations via kernel regression. United States: N. p., 2019.
Web. doi:10.1039/c9re00357f.
Khan, Salman A., Vandervelden, Craig A., Scott, Susannah L., & Peters, Baron. Grafting metal complexes onto amorphous supports: from elementary steps to catalyst site populations via kernel regression. United States. https://doi.org/10.1039/c9re00357f
Khan, Salman A., Vandervelden, Craig A., Scott, Susannah L., and Peters, Baron. Thu .
"Grafting metal complexes onto amorphous supports: from elementary steps to catalyst site populations via kernel regression". United States. https://doi.org/10.1039/c9re00357f. https://www.osti.gov/servlets/purl/1800093.
@article{osti_1800093,
title = {Grafting metal complexes onto amorphous supports: from elementary steps to catalyst site populations via kernel regression},
author = {Khan, Salman A. and Vandervelden, Craig A. and Scott, Susannah L. and Peters, Baron},
abstractNote = {Ab initio computational studies have made tremendous progress in describing the behavior of molecular (homogeneous) catalysts and crystalline versions of heterogeneous catalysts, but not for amorphous heterogeneous catalysts. Even widely used industrial amorphous catalysts like atomically dispersed Cr on silica remain poorly understood and largely intractable to computational investigation. The central problems are that (i) the amorphous support presents an unknown quenched disordered structure, (ii) metal atoms attach to various surface grafting sites with different rates, and (iii) the resulting grafted sites have different activation and catalytic reaction kinetics. This study combines kernel regression and importance sampling techniques to efficiently model grafting of metal ions onto a non-uniform ensemble of support environments. Our analysis uses a simple model of the quenched disordered support environment, grafting chemistry, and catalytic activity of the resulting grafted sites.},
doi = {10.1039/c9re00357f},
journal = {Reaction Chemistry & Engineering},
number = 1,
volume = 5,
place = {United States},
year = {Thu Oct 31 00:00:00 EDT 2019},
month = {Thu Oct 31 00:00:00 EDT 2019}
}
Web of Science
Works referenced in this record:
Computational Studies of Synthetically Relevant Homogeneous Organometallic Catalysis Involving Ni, Pd, Ir, and Rh: An Overview of Commonly Employed DFT Methods and Mechanistic Insights
journal, July 2015
- Sperger, Theresa; Sanhueza, Italo A.; Kalvet, Indrek
- Chemical Reviews, Vol. 115, Issue 17
Oxidative dehydrogenation of propane using lattice oxygen of vanadium oxides on silica
journal, January 2011
- Fukudome, Kenta; Ikenaga, Na-oki; Miyake, Takanori
- Catalysis Science & Technology, Vol. 1, Issue 6
Molecular-Level Insight into Cr/Silica Phillips-Type Catalysts: Polymerization-Active Dinuclear Chromium Sites
journal, March 2002
- Espelid, Øystein; Børve, Knut J.
- Journal of Catalysis, Vol. 206, Issue 2
Structure of Isolated Molybdenum(VI) and Molybdenum(IV) Oxide Species on Silica: Periodic and Cluster DFT Studies
journal, February 2012
- Handzlik, Jarosław; Ogonowski, Jan
- The Journal of Physical Chemistry C, Vol. 116, Issue 9
Application of the ONIOM (QM/QM) method in the study of molybdena–silica system active in olefin metathesis
journal, January 2007
- Handzlik, Jarosław
- International Journal of Quantum Chemistry, Vol. 107, Issue 11
Catalytic sites in silica-supported titanium catalysts: silsesquioxane complexes as models
journal, July 2005
- Fraile, J.; Garcia, J.; Mayoral, J.
- Journal of Catalysis, Vol. 233, Issue 1
Reexamining the evidence for proton transfers in ethylene polymerization
journal, July 2015
- Peters, Baron; Scott, Susannah L.; Fong, Anthony
- Proceedings of the National Academy of Sciences, Vol. 112, Issue 31
Reassessment of the Electronic Structure of Cr(VI) Sites Supported on Amorphous Silica and Implications for Cr Coordination Number
journal, February 2018
- Peek, Nathan M.; Jeffcoat, David B.; Moisii, Cristina
- The Journal of Physical Chemistry C, Vol. 122, Issue 8
Mono- and Dinuclear Silica-Supported Titanium(IV) Complexes and the Effect of TiOTi Connectivity on Reactivity
journal, August 1999
- Bouh, Abdillahi Omar; Rice, Gordon L.; Scott, Susannah L.
- Journal of the American Chemical Society, Vol. 121, Issue 31
How Enzymes Work: Analysis by Modern Rate Theory and Computer Simulations
journal, January 2004
- Garcia-Viloca, M.
- Science, Vol. 303, Issue 5655
Common Features of Extraordinary Rate Theories
journal, May 2015
- Peters, Baron
- The Journal of Physical Chemistry B, Vol. 119, Issue 21
Catalysis by Doped Oxides
journal, December 2012
- McFarland, Eric W.; Metiu, Horia
- Chemical Reviews, Vol. 113, Issue 6
Accurate Amorphous Silica Surface Models from First-Principles Thermodynamics of Surface Dehydroxylation
journal, April 2014
- Ewing, Christopher S.; Bhavsar, Saurabh; Veser, Götz
- Langmuir, Vol. 30, Issue 18
Oxygen-Coverage Effects on Molecular Dissociations at a Pt Metal Surface
journal, February 2009
- Getman, R. B.; Schneider, W. F.; Smeltz, A. D.
- Physical Review Letters, Vol. 102, Issue 7
Theoretical Heterogeneous Catalysis: Scaling Relationships and Computational Catalyst Design
journal, June 2016
- Greeley, Jeffrey
- Annual Review of Chemical and Biomolecular Engineering, Vol. 7, Issue 1
Single atom catalysts on amorphous supports: A quenched disorder perspective
journal, March 2015
- Peters, Baron; Scott, Susannah L.
- The Journal of Chemical Physics, Vol. 142, Issue 10
Theoretical Study of the Mechanism of Surface Methoxy and Dimethyl Ether Formation from Methanol Catalyzed by Zeolitic Protons
journal, March 1997
- Blaszkowski, Solange R.; van Santen, Rutger A.
- The Journal of Physical Chemistry B, Vol. 101, Issue 13
Hydrogenation of CO on a silica surface: An embedded cluster approach
journal, April 2008
- Goumans, T. P. M.; Catlow, C. Richard A.; Brown, Wendy A.
- The Journal of Chemical Physics, Vol. 128, Issue 13
Computational Support for Phillips Catalyst Initiation via Cr–C Bond Homolysis in a Chromacyclopentane Site
journal, January 2018
- Fong, Anthony; Vandervelden, Craig; Scott, Susannah L.
- ACS Catalysis, Vol. 8, Issue 3
Evidence for the Pairwise Disposition of Grafting Sites on Highly Dehydroxylated Silicas via Their Reactions with Ga(CH 3 ) 3
journal, April 2011
- Fleischman, Samuel D.; Scott, Susannah L.
- Journal of the American Chemical Society, Vol. 133, Issue 13
An X-ray Absorption Study of Two VOCl 3 -Modified Silicas: Evidence for Chloride−Silica Interactions
journal, March 2005
- Deguns, Eric W.; Taha, Ziyad; Meitzner, George D.
- The Journal of Physical Chemistry B, Vol. 109, Issue 11
VO x /SiO 2 Catalyst Prepared by Grafting VOCl 3 on Silica for Oxidative Dehydrogenation of Propane
journal, September 2015
- Zhu, Haibo; Ould-Chikh, Samy; Dong, Hailin
- ChemCatChem, Vol. 7, Issue 20
Chromium Oxide Species Supported on Silica: A Representative Periodic DFT Model
journal, December 2011
- Guesmi, Hazar; Tielens, Frederik
- The Journal of Physical Chemistry C, Vol. 116, Issue 1
The Mechanism of Cellulose Hydrolysis by a Two-Step, Retaining Cellobiohydrolase Elucidated by Structural and Transition Path Sampling Studies
journal, December 2013
- Knott, Brandon C.; Haddad Momeni, Majid; Crowley, Michael F.
- Journal of the American Chemical Society, Vol. 136, Issue 1
Parameters for the Description of Transition States
journal, March 1953
- Leffler, J. E.
- Science, Vol. 117, Issue 3039
Ab Initio Study of the Hydroxylated Surface of Amorphous Silica: A Representative Model
journal, May 2008
- Tielens, Frederik; Gervais, Christel; Lambert, Jean François
- Chemistry of Materials, Vol. 20, Issue 10
Computational insights into reduction of the Phillips CrOx/SiO2 catalyst by ethylene and CO
journal, March 2018
- Gierada, Maciej; Handzlik, Jarosław
- Journal of Catalysis, Vol. 359
Influence of silica calcination temperature on the performance of supported catalyst SiO2–nBuSnCl3/MAO/(nBuCp)2ZrCl2 polymerizing ethylene without separately feeding the MAO cocatalyst
journal, March 2007
- Atiqullah, M.; Akhtar, M. N.; Moman, A. A.
- Applied Catalysis A: General, Vol. 320
The ONIOM Method and Its Applications
journal, April 2015
- Chung, Lung Wa; Sameera, W. M. C.; Ramozzi, Romain
- Chemical Reviews, Vol. 115, Issue 12
Nature of WO x Sites on SiO 2 and Their Molecular Structure–Reactivity/Selectivity Relationships for Propylene Metathesis
journal, April 2016
- Lwin, Soe; Li, Yuanyuan; Frenkel, Anatoly I.
- ACS Catalysis, Vol. 6, Issue 5
Analysis of silica-supported vanadia by X-ray absorption spectroscopy: Combined theoretical and experimental studies
journal, March 2009
- Cavalleri, M.; Hermann, K.; Knop-Gericke, A.
- Journal of Catalysis, Vol. 262, Issue 2
Properties and structure of vitreous silica. II
journal, January 1971
- Brückner, R.
- Journal of Non-Crystalline Solids, Vol. 5, Issue 3
Semiconductors Used in Photovoltaic and Photocatalytic Devices: Assessing Fundamental Properties from DFT
journal, March 2014
- Le Bahers, Tangui; Rérat, Michel; Sautet, Philippe
- The Journal of Physical Chemistry C, Vol. 118, Issue 12
Analysis of the Reaction Mechanism and Catalytic Activity of Metal-Substituted Beta Zeolite for the Isomerization of Glucose to Fructose
journal, April 2014
- Li, Yi-Pei; Head-Gordon, Martin; Bell, Alexis T.
- ACS Catalysis, Vol. 4, Issue 5
Role of metal oxide support in redox reactions of iron oxide for chemical looping applications: experiments and density functional theory calculations
journal, January 2011
- Li, Fanxing; Luo, Siwei; Sun, Zhenchao
- Energy & Environmental Science, Vol. 4, Issue 9, p. 3661-3667
The Importance of Ensemble Averaging in Enzyme Kinetics
journal, December 2014
- Masgrau, Laura; Truhlar, Donald G.
- Accounts of Chemical Research, Vol. 48, Issue 2
Rate-Enhancing Roles of Water Molecules in Methyltrioxorhenium-Catalyzed Olefin Epoxidation by Hydrogen Peroxide
journal, July 2015
- Goldsmith, Bryan R.; Hwang, Taeho; Seritan, Stefan
- Journal of the American Chemical Society, Vol. 137, Issue 30
Strain effect and dual initiation pathway in CrIII/SiO2 polymerization catalysts from amorphous periodic models
journal, February 2017
- Floryan, Leonard; Borosy, András P.; Núñez-Zarur, Francisco
- Journal of Catalysis, Vol. 346
Properties and structure of vitreous silica. I
journal, November 1970
- Brückner, R.
- Journal of Non-Crystalline Solids, Vol. 5, Issue 2
Investigation of Silica-Supported Vanadium Oxide Catalysts by High-Field 51 V Magic-Angle Spinning NMR
journal, March 2017
- Jaegers, Nicholas R.; Wan, Chuan; Hu, Mary Y.
- The Journal of Physical Chemistry C, Vol. 121, Issue 11
Origin of the Raman bands, D1 and D2, in high surface area and vitreous silicas
journal, January 1992
- Humbert, B.; Burneau, A.; Gallas, J. P.
- Journal of Non-Crystalline Solids, Vol. 143
The surface structure of silica gel
journal, August 1968
- Peri, J. B.; Hensley, A. L.
- The Journal of Physical Chemistry, Vol. 72, Issue 8
Proton transfers are key elementary steps in ethylene polymerization on isolated chromium(III) silicates
journal, July 2014
- Delley, M. F.; Nunez-Zarur, F.; Conley, M. P.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 32
Isolated catalyst sites on amorphous supports: A systematic algorithm for understanding heterogeneities in structure and reactivity
journal, May 2013
- Goldsmith, Bryan R.; Sanderson, Evan D.; Bean, Daniel
- The Journal of Chemical Physics, Vol. 138, Issue 20
Simulations of Ammonia Adsorption for the Characterization of Acid Sites in Metal-Doped Amorphous Silicates
journal, September 2017
- Jystad, Amy M.; Biancardi, Alessandro; Caricato, Marco
- The Journal of Physical Chemistry C, Vol. 121, Issue 40
Liquid-Phase Modeling in Heterogeneous Catalysis
journal, January 2018
- Saleheen, Mohammad; Heyden, Andreas
- ACS Catalysis, Vol. 8, Issue 3
A Density Functional Theory Study of the Oxidation of Methanol to Formaldehyde over Vanadia Supported on Silica, Titania, and Zirconia
journal, August 2002
- Khaliullin, Rustam Z.; Bell, Alexis T.
- The Journal of Physical Chemistry B, Vol. 106, Issue 32
Silica Surface Features and Their Role in the Adsorption of Biomolecules: Computational Modeling and Experiments
journal, December 2012
- Rimola, Albert; Costa, Dominique; Sodupe, Mariona
- Chemical Reviews, Vol. 113, Issue 6
Propylene epoxidation over titanium-on-silica catalyst—the heart of the SMPO process
journal, September 2004
- Buijink, J. K. F.; van Vlaanderen, J. J. M.; Crocker, M.
- Catalysis Today, Vol. 93-95
Preparation and in-Situ Spectroscopic Characterization of Molecularly Dispersed Titanium Oxide on Silica
journal, July 1998
- Gao, Xingtao; Bare, Simon R.; Fierro, J. L. G.
- The Journal of Physical Chemistry B, Vol. 102, Issue 29
The surface chemistry of amorphous silica. Zhuravlev model
journal, November 2000
- Zhuravlev, L. T.
- Colloids and Surfaces A: Physicochemical and Engineering Aspects, Vol. 173, Issue 1-3
Raman investigation of ring configurations in vitreous silica
journal, July 1981
- Sharma, Shiv K.; Mammone, Joseph F.; Nicol, Malcolm F.
- Nature, Vol. 292, Issue 5819
Spectroscopic and structural characterization of Cr(II)/SiO2 active site precursors in model Phillips polymerization catalysts
journal, September 2012
- Zhong, Lei; Lee, Ming-Yung; Liu, Zhen
- Journal of Catalysis, Vol. 293
Site-averaged kinetics for catalysts on amorphous supports: an importance learning algorithm
journal, January 2019
- Vandervelden, Craig; Khan, Salman Ahmad; Scott, Susannah L.
- Reaction Chemistry & Engineering
The surprising oxidation state of fumed silica and the nature of water binding to silicon oxides and hydroxides
journal, January 2011
- Wang, Tsang-Hsiu; Gole, James L.; White, Mark G.
- Chemical Physics Letters, Vol. 501, Issue 4-6
Realistic Models of Hydroxylated Amorphous Silica Surfaces and MCM-41 Mesoporous Material Simulated by Large-scale Periodic B3LYP Calculations
journal, December 2008
- Ugliengo, P.; Sodupe, M.; Musso, F.
- Advanced Materials, Vol. 20, Issue 23
Amorphous SiO 2 surface models: energetics of the dehydroxylation process, strain, ab initio atomistic thermodynamics and IR spectroscopic signatures
journal, January 2016
- Comas-Vives, Aleix
- Physical Chemistry Chemical Physics, Vol. 18, Issue 10
Surface structure and chemistry of high surface area silica gels
journal, April 1990
- Brinker, C. J.; Brow, R. K.; Tallant, D. R.
- Journal of Non-Crystalline Solids, Vol. 120, Issue 1-3
Surface Organometallic and Coordination Chemistry toward Single-Site Heterogeneous Catalysts: Strategies, Methods, Structures, and Activities
journal, January 2016
- Copéret, Christophe; Comas-Vives, Aleix; Conley, Matthew P.
- Chemical Reviews, Vol. 116, Issue 2
Role of Environment for Catalysis of the DNA Repair Enzyme MutY
journal, May 2012
- Brunk, Elizabeth; Arey, J. Samuel; Rothlisberger, Ursula
- Journal of the American Chemical Society, Vol. 134, Issue 20
Accurate Prediction of Hydrocarbon Interactions with Zeolites Utilizing Improved Exchange-Correlation Functionals and QM/MM Methods: Benchmark Calculations of Adsorption Enthalpies and Application to Ethene Methylation by Methanol
journal, July 2012
- Gomes, Joseph; Zimmerman, Paul M.; Head-Gordon, Martin
- The Journal of Physical Chemistry C, Vol. 116, Issue 29
Effects of calcination and activation conditions on ordered mesoporous carbon supported iron catalysts for production of lower olefins from synthesis gas
journal, January 2016
- Oschatz, M.; van Deelen, T. W.; Weber, J. L.
- Catalysis Science & Technology, Vol. 6, Issue 24
A review of multiscale modeling of metal-catalyzed reactions: Mechanism development for complexity and emergent behavior
journal, October 2011
- Salciccioli, M.; Stamatakis, M.; Caratzoulas, S.
- Chemical Engineering Science, Vol. 66, Issue 19
Structure of Monomeric Chromium(VI) Oxide Species Supported on Silica: Periodic and Cluster DFT Studies
journal, April 2013
- Handzlik, Jarosław; Grybos, Robert; Tielens, Frederik
- The Journal of Physical Chemistry C, Vol. 117, Issue 16
Molecular dynamics as a tool to study heterogeneity in zeolites – Effect of Na+ cations on diffusion of CO2 and N2 in Na-ZSM-5
journal, January 2015
- Newsome, David; Coppens, Marc-Olivier
- Chemical Engineering Science, Vol. 121
Formation of Digallium Sites in the Reaction of Trimethylgallium with Silica
journal, April 2006
- Taha, Ziyad A.; Deguns, Eric W.; Chattopadhyay, Swarup
- Organometallics, Vol. 25, Issue 8
Kernel methods in machine learning
journal, June 2008
- Hofmann, Thomas; Schölkopf, Bernhard; Smola, Alexander J.
- The Annals of Statistics, Vol. 36, Issue 3
Silica-Supported, Single-Site Titanium Catalysts for Olefin Epoxidation. A Molecular Precursor Strategy for Control of Catalyst Structure
journal, July 2002
- Jarupatrakorn, Jonggol; Tilley, T. Don
- Journal of the American Chemical Society, Vol. 124, Issue 28
Computational Kinetic Discrimination of Ethylene Polymerization Mechanisms for the Phillips (Cr/SiO 2 ) Catalyst
journal, May 2015
- Fong, Anthony; Yuan, Ye; Ivry, Sam L.
- ACS Catalysis, Vol. 5, Issue 6
Impact of Support Interactions for Single-Atom Molybdenum Catalysts on Amorphous Silica
journal, November 2016
- Ewing, Christopher S.; Bagusetty, Abhishek; Patriarca, Evan G.
- Industrial & Engineering Chemistry Research, Vol. 55, Issue 48
Reactions of HMDS, TiCl 4 , ZrCl 4 , and AlCl 3 with Silica As Interpreted from Low-Frequency Diffuse Reflectance Infrared Spectra
journal, December 1997
- Kytökivi, Arla; Haukka, Suvi
- The Journal of Physical Chemistry B, Vol. 101, Issue 49
Surface organometallic chemistry in heterogeneous catalysis
journal, January 2018
- Samantaray, Manoja K.; Pump, Eva; Bendjeriou-Sedjerari, Anissa
- Chemical Society Reviews, Vol. 47, Issue 22
Kernel methods in machine learning
text, January 2007
- Hofmann, Thomas; Schölkopf, Bernhard; Smola, Alexander J.
- arXiv