Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere

Bhattacharjee, Arunima; Anderson, Lindsey N.; Alfaro, Trinidad; Porras-Alfaro, Andrea; Jumpponen, Ari; Hofmockel, Kirsten S.; Jansson, Janet K.; Anderton, Christopher R.; Nelson, William C.; Stajich, ed., Jason E.

doi:10.1128/MRA.00884-20

Title: Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere

Abstract

The novel fungal strain, Fusarium sp. strain DS 682, was isolated from the rhizosphere of the perennial grass, Bouteloua gracilis , at the Konza Prairie Biological Station in Kansas. This fungal strain is common across North American grasslands and is resilient to environmental fluctuations. The draft genome is estimated to be 97.2% complete.

Authors:

Bhattacharjee, Arunima ^[1];

^[1]; Alfaro, Trinidad ^[1]; Porras-Alfaro, Andrea ^[2]; Jumpponen, Ari ^[3]; Hofmockel, Kirsten S. ^[4]; Jansson, Janet K. ^[1];

^[1];

^[1]; Stajich, ed., Jason E.

Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, USA
Department of Biological Sciences, Western Illinois University, Macomb, Illinois, USA
Division of Biology, Kansas State University, Manhattan, Kansas, USA
Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, USA, Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, USA

Publication Date:: Thu Jan 07 00:00:00 EST 2021

Sponsoring Org.:: USDOE

OSTI Identifier:: 1755975

Grant/Contract Number:: AC05-76RLO1830

Resource Type:: Published Article

Journal Name:: Microbiology Resource Announcements

Additional Journal Information:: Journal Name: Microbiology Resource Announcements Journal Volume: 10 Journal Issue: 1; Journal ID: ISSN 2576-098X

Publisher:: American Society for Microbiology

Country of Publication:: United States

Language:: English

Citation Formats


                    Bhattacharjee, Arunima, Anderson, Lindsey N., Alfaro, Trinidad, Porras-Alfaro, Andrea, Jumpponen, Ari, Hofmockel, Kirsten S., Jansson, Janet K., Anderton, Christopher R., Nelson, William C., and Stajich, ed., Jason E. Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere.  United States: N. p., 2021. 
Web.  doi:10.1128/MRA.00884-20.

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                    Bhattacharjee, Arunima, Anderson, Lindsey N., Alfaro, Trinidad, Porras-Alfaro, Andrea, Jumpponen, Ari, Hofmockel, Kirsten S., Jansson, Janet K., Anderton, Christopher R., Nelson, William C., & Stajich, ed., Jason E. Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere.  United States.  https://doi.org/10.1128/MRA.00884-20

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                    Bhattacharjee, Arunima, Anderson, Lindsey N., Alfaro, Trinidad, Porras-Alfaro, Andrea, Jumpponen, Ari, Hofmockel, Kirsten S., Jansson, Janet K., Anderton, Christopher R., Nelson, William C., and Stajich, ed., Jason E. Thu .  
"Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere".  United States.  https://doi.org/10.1128/MRA.00884-20.

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@article{osti_1755975,

  title        = {Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere},

  author       = {Bhattacharjee, Arunima and Anderson, Lindsey N. and Alfaro, Trinidad and Porras-Alfaro, Andrea and Jumpponen, Ari and Hofmockel, Kirsten S. and Jansson, Janet K. and Anderton, Christopher R. and Nelson, William C. and Stajich, ed., Jason E.},

  abstractNote = {The novel fungal strain, Fusarium sp. strain DS 682, was isolated from the rhizosphere of the perennial grass, Bouteloua gracilis , at the Konza Prairie Biological Station in Kansas. This fungal strain is common across North American grasslands and is resilient to environmental fluctuations. The draft genome is estimated to be 97.2% complete.},

  doi          = {10.1128/MRA.00884-20},

  journal      = {Microbiology Resource Announcements},

  number       = 1,

  volume       = 10,

  place        = {United States},

  year         = {Thu Jan 07 00:00:00 EST 2021},

  month        = {Thu Jan 07 00:00:00 EST 2021}

}

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Similar Records

Title: Draft Genome Sequence of Fusarium sp. Strain DS 682, a Novel Fungal Isolate from the Grass Rhizosphere

Abstract

Citation Formats

QUAST: quality assessment tool for genome assemblies journal, February 2013

Marasas et al. 1984 “Toxigenic Fusarium Species: Identity and Mycotoxicology” revisited journal, November 2018

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments journal, March 2010

MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices journal, June 2016

AliView: a fast and lightweight alignment viewer and editor for large datasets journal, August 2014

ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts journal, April 1993

ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data journal, June 2020

MUSCLE: a multiple sequence alignment method with reduced time and space complexity journal, August 2004

QUAST: quality assessment tool for genome assemblies
journal, February 2013

Marasas et al. 1984 “Toxigenic Fusarium Species: Identity and Mycotoxicology” revisited
journal, November 2018

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
journal, March 2010

MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices
journal, June 2016

AliView: a fast and lightweight alignment viewer and editor for large datasets
journal, August 2014

ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts
journal, April 1993

ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data
journal, June 2020

MUSCLE: a multiple sequence alignment method with reduced time and space complexity
journal, August 2004