CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa

Gomez-Cano, Fabio; Carey, Lisa; Lucas, Kevin; García Navarrete, Tatiana; Mukundi, Eric; Lundback, Steve; Schnell, Danny; Grotewold, Erich

doi:10.1093/database/baaa075

Title: CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa

Journal Article · 10 December 2020 · Database

DOI: https://doi.org/10.1093/database/baaa075 · OSTI ID:1735659

^[1]; Carey, Lisa ^[2]; Lucas, Kevin ^[1]; García Navarrete, Tatiana ^[1]; Mukundi, Eric ^[1]; Lundback, Steve ^[1];

^[2]; Grotewold, Erich ^[1]

Department of Biochemistry and Molecular Biology, 603 Wilson Road, Room 212, Biochemistry Building, East Lansing, MI 48824-6473, USA
Department of Plant Biology, Michigan State University, 612 Wilson Road, Room 166, East Lansing, MI 48824-1312, USA

Abstract Camelina is an annual oilseed plant from the Brassicaceae family that is gaining momentum as a biofuel winter cover crop. However, a significant limitation in further enhancing its utility as a producer of oils that can be used as biofuels, jet fuels or bio-based products is the absence of a repository for all the gene expression and regulatory information that is being rapidly generated by the community. Here, we provide CamRegBase (https://camregbase.org/) as a one-stop resource to access Camelina information on gene expression and co-expression, transcription factors, lipid associated genes and genome-wide orthologs in the close-relative reference plant Arabidopsis. We envision this as a resource of curated information for users, as well as a repository of new gene regulation information.

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Research Organization:: Michigan State Univ., East Lansing, MI (United States)

Sponsoring Organization:: National Science Foundation Research Traineeship Program; USDOE Office of Science (SC), Basic Energy Sciences (BES); USDOE Office of Science (SC), Biological and Environmental Research (BER)

Grant/Contract Number:: SC0018269

OSTI ID:: 1735659

Journal Information:: Database, Journal Name: Database Vol. 2020; ISSN 1758-0463

Publisher:: Oxford University PressCopyright Statement

Country of Publication:: United Kingdom

Language:: English

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