CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa
Abstract
Abstract Camelina is an annual oilseed plant from the Brassicaceae family that is gaining momentum as a biofuel winter cover crop. However, a significant limitation in further enhancing its utility as a producer of oils that can be used as biofuels, jet fuels or bio-based products is the absence of a repository for all the gene expression and regulatory information that is being rapidly generated by the community. Here, we provide CamRegBase (https://camregbase.org/) as a one-stop resource to access Camelina information on gene expression and co-expression, transcription factors, lipid associated genes and genome-wide orthologs in the close-relative reference plant Arabidopsis. We envision this as a resource of curated information for users, as well as a repository of new gene regulation information.
- Authors:
-
[1];
[2];
- Department of Biochemistry and Molecular Biology, 603 Wilson Road, Room 212, Biochemistry Building, East Lansing, MI 48824-6473, USA
- Department of Plant Biology, Michigan State University, 612 Wilson Road, Room 166, East Lansing, MI 48824-1312, USA
- Publication Date:
- Research Org.:
- Michigan State Univ., East Lansing, MI (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES); USDOE Office of Science (SC), Biological and Environmental Research (BER); National Science Foundation Research Traineeship Program
- OSTI Identifier:
- 1735659
- Alternate Identifier(s):
- OSTI ID: 1865589
- Grant/Contract Number:
- SC0018269; DGE-1828149
- Resource Type:
- Published Article
- Journal Name:
- Database
- Additional Journal Information:
- Journal Name: Database Journal Volume: 2020; Journal ID: ISSN 1758-0463
- Publisher:
- Oxford University Press
- Country of Publication:
- United Kingdom
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES
Citation Formats
Gomez-Cano, Fabio, Carey, Lisa, Lucas, Kevin, García Navarrete, Tatiana, Mukundi, Eric, Lundback, Steve, Schnell, Danny, and Grotewold, Erich. CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa. United Kingdom: N. p., 2020.
Web. doi:10.1093/database/baaa075.
Gomez-Cano, Fabio, Carey, Lisa, Lucas, Kevin, García Navarrete, Tatiana, Mukundi, Eric, Lundback, Steve, Schnell, Danny, & Grotewold, Erich. CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa. United Kingdom. https://doi.org/10.1093/database/baaa075
Gomez-Cano, Fabio, Carey, Lisa, Lucas, Kevin, García Navarrete, Tatiana, Mukundi, Eric, Lundback, Steve, Schnell, Danny, and Grotewold, Erich. Fri .
"CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa". United Kingdom. https://doi.org/10.1093/database/baaa075.
@article{osti_1735659,
title = {CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa},
author = {Gomez-Cano, Fabio and Carey, Lisa and Lucas, Kevin and García Navarrete, Tatiana and Mukundi, Eric and Lundback, Steve and Schnell, Danny and Grotewold, Erich},
abstractNote = {Abstract Camelina is an annual oilseed plant from the Brassicaceae family that is gaining momentum as a biofuel winter cover crop. However, a significant limitation in further enhancing its utility as a producer of oils that can be used as biofuels, jet fuels or bio-based products is the absence of a repository for all the gene expression and regulatory information that is being rapidly generated by the community. Here, we provide CamRegBase (https://camregbase.org/) as a one-stop resource to access Camelina information on gene expression and co-expression, transcription factors, lipid associated genes and genome-wide orthologs in the close-relative reference plant Arabidopsis. We envision this as a resource of curated information for users, as well as a repository of new gene regulation information.},
doi = {10.1093/database/baaa075},
journal = {Database},
number = ,
volume = 2020,
place = {United Kingdom},
year = {2020},
month = {12}
}
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