CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa

Gomez-Cano, Fabio; Carey, Lisa; Lucas, Kevin; García Navarrete, Tatiana; Mukundi, Eric; Lundback, Steve; Schnell, Danny; Grotewold, Erich

doi:10.1093/database/baaa075

Title: CamRegBase: a gene regulation database for the biofuel crop, Camelina sativa

Journal Article · 11 December 2020 · Database

DOI: https://doi.org/10.1093/database/baaa075 · OSTI ID:1735659

^[1]; Carey, Lisa ^[2]; Lucas, Kevin ^[1]; García Navarrete, Tatiana ^[1]; Mukundi, Eric ^[1]; Lundback, Steve ^[1];

^[2]; Grotewold, Erich ^[1]

Dept. of Biochemistry and Molecular Biology, East Lansing, MI (United States)
Michigan State Univ., East Lansing, MI (United States)

Camelina is an annual oilseed plant from the Brassicaceae family that is gaining momentum as a biofuel winter cover crop. However, a significant limitation in further enhancing its utility as a producer of oils that can be used as biofuels, jet fuels or bio-based products is the absence of a repository for all the gene expression and regulatory information that is being rapidly generated by the community. Here, we provide CamRegBase (https://camregbase.org/) as a one-stop resource to access Camelina information on gene expression and co-expression, transcription factors, lipid associated genes and genome-wide orthologs in the close-relative reference plant Arabidopsis. We envision this as a resource of curated information for users, as well as a repository of new gene regulation information.

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Research Organization:: Michigan State Univ., East Lansing, MI (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER); USDOE Office of Science (SC), Basic Energy Sciences (BES); National Science Foundation Research Traineeship Program

Grant/Contract Number:: SC0018269; DGE-1828149

OSTI ID:: 1735659

Alternate ID(s):: OSTI ID: 1865589

Journal Information:: Database, Vol. 2020; ISSN 1758-0463

Publisher:: Oxford University Press - International Society for BiocurationCopyright Statement

Country of Publication:: United States

Language:: English

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