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Structural properties of amyloid β(1-40) dimer explored by replica exchange molecular dynamics simulations: Amyloid β Dimers
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Function and toxicity of amyloid beta and recent therapeutic interventions targeting amyloid beta in Alzheimer's disease
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June 2005 |
Protein misfolding occurs by slow diffusion across multiple barriers in a rough energy landscape
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Routine Access to Millisecond Time Scale Events with Accelerated Molecular Dynamics
- Pierce, Levi C. T.; Salomon-Ferrer, Romelia; Augusto F. de Oliveira, Cesar
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Journal of Chemical Theory and Computation, Vol. 8, Issue 9
https://doi.org/10.1021/ct300284c
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August 2012 |
Aβ42 assembles into specific β-barrel pore-forming oligomers in membrane-mimicking environments
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September 2016 |
Single-Molecule Studies of Intrinsically Disordered Proteins
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January 2014 |
Structural Characterization and Inhibition of Toxic Amyloid-β Oligomeric Intermediates
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July 2013 |
Elucidation of Amyloid β-Protein Oligomerization Mechanisms: Discrete Molecular Dynamics Study
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March 2010 |
Common mechanisms of amyloid oligomer pathogenesis in degenerative disease
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April 2006 |
Intracellular amyloid-β in Alzheimer's disease
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July 2007 |
Nanoprobing of misfolding and interactions of amyloid β 42 protein
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May 2014 |
Atomic-Level Characterization of the Structural Dynamics of Proteins
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October 2010 |
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
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February 2008 |
Structural conversion of neurotoxic amyloid-β1–42 oligomers to fibrils
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April 2010 |
Mechanism of amyloid β−protein dimerization determined using single−molecule AFM force spectroscopy
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October 2013 |
The Alzheimer’s Peptides Aβ40 and 42 Adopt Distinct Conformations in Water: A Combined MD / NMR Study
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May 2007 |
Amyloid β-Protein Aggregation Produces Highly Reproducible Kinetic Data and Occurs by a Two-Phase Process
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September 2009 |
Comparison of simple potential functions for simulating liquid water
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July 1983 |
Atomic force microscopic imaging of seeded fibril formation and fibril branching by the Alzheimer's disease amyloid-β protein
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December 1997 |
3D structure of Alzheimer's amyloid- (1-42) fibrils
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November 2005 |
Atomic View of a Toxic Amyloid Small Oligomer
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March 2012 |
Alzheimer's Disease: Genes, Proteins, and Therapy
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April 2001 |
Solution structure of the Alzheimer amyloid β-peptide (1-42) in an apolar microenvironment: Similarity with a virus fusion domain
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October 2002 |
AMPAR Removal Underlies Aβ-Induced Synaptic Depression and Dendritic Spine Loss
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December 2006 |
The Amyloid Hypothesis of Alzheimer's Disease: Progress and Problems on the Road to Therapeutics
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July 2002 |
Amyloid β-Protein Monomer Folding: Free-Energy Surfaces Reveal Alloform-Specific Differences
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December 2008 |
Protein Misfolded Oligomers: Experimental Approaches, Mechanism of Formation, and Structure-Toxicity Relationships
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March 2012 |
Energy landscape of a small peptide revealed by dihedral angle principal component analysis
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November 2004 |
Structural Characterization of a Soluble Amyloid β-Peptide Oligomer
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March 2009 |
An Azobenzene Photoswitch Sheds Light on Turn Nucleation in Amyloid-β Self-Assembly
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February 2012 |
Direct characterization of amyloidogenic oligomers by single-molecule fluorescence
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September 2008 |
Design of small molecules that target metal-A species and regulate metal-induced A aggregation and neurotoxicity
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December 2010 |
Single Molecule Tracking Analysis Reveals That the Surface Mobility of Amyloid Oligomers Is Driven by Their Conformational Structure
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August 2011 |
Structural, morphological, and functional diversity of amyloid oligomers
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July 2015 |
Structure-neurotoxicity relationships of amyloid -protein oligomers
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August 2009 |
Alzheimer's Disease and the Amyloid-β Peptide
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January 2010 |
Exploring the aggregation free energy landscape of the amyloid-β protein (1–40)
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October 2016 |
A comparative analysis of the aggregation behavior of amyloid-β peptide variants
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October 2012 |
Annular Protofibrils Are a Structurally and Functionally Distinct Type of Amyloid Oligomer
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December 2008 |
Quaternary Structure Defines a Large Class of Amyloid-β Oligomers Neutralized by Sequestration
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June 2015 |
Effect of acidic pH on the stability of α-synuclein dimers: Stability of α-Synuclein Dimers
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July 2016 |
Self-Propagating, Molecular-Level Polymorphism in Alzheimer's -Amyloid Fibrils
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January 2005 |
A partially folded structure of amyloid-beta(1–40) in an aqueous environment
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July 2011 |
Structural Classification of Toxic Amyloid Oligomers
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August 2008 |
Regulation of NMDA receptor trafficking by amyloid-β
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July 2005 |
The Structure of Misfolded Amyloidogenic Dimers: Computational Analysis of Force Spectroscopy Data
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December 2014 |
Misfolding of the amyloid β-protein: A molecular dynamics study
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November 2005 |
Direct Detection of α-Synuclein Dimerization Dynamics: Single-Molecule Fluorescence Analysis
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April 2015 |
Atomic-Level Characterization of the Ensemble of the Aβ(1–42) Monomer in Water Using Unbiased Molecular Dynamics Simulations and Spectral Algorithms
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January 2011 |
Molecular Mechanism of Misfolding and Aggregation of Aβ(13–23)
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May 2013 |
Cell-Membrane-Mimicking Lipid-Coated Nanoparticles Confer Raman Enhancement to Membrane Proteins and Reveal Membrane-Attached Amyloid-β Conformation
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August 2015 |
Thermodynamics of Aβ(1−40) Amyloid Fibril Elongation †
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September 2005 |
Interactions of Zn(ii) and Cu(ii) ions with Alzheimer's amyloid-beta peptide. Metal ion binding, contribution to fibrillization and toxicity
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January 2011 |
Protein folding and misfolding
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December 2003 |
Structures of the Alzheimer’s Wild-Type Aβ1-40 Dimer from Atomistic Simulations
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August 2015 |
A series of PDB-related databanks for everyday needs
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October 2014 |
α-Synuclein Misfolding Assessed with Single Molecule AFM Force Spectroscopy: Effect of Pathogenic Mutations
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October 2013 |
The presenilin 2 mutation (N141I) linked to familial Alzheimer disease (Volga German families) increases the secretion of amyloid protein ending at the 42nd (or 43rd) residue
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March 1997 |
Amyloid -protein (A ) assembly: A 40 and A 42 oligomerize through distinct pathways
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December 2002 |
Self-assembly of the full-length amyloid Aβ42 protein in dimers
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January 2016 |
PROFASI: A Monte Carlo simulation package for protein folding and aggregation
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January 2006 |
Nanoscale Dynamics of Amyloid β-42 Oligomers As Revealed by High-Speed Atomic Force Microscopy
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October 2016 |
Significant Structural Differences between Transient Amyloid-β Oligomers and Less-Toxic Fibrils in Regions Known To Harbor Familial Alzheimer′s Mutations
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April 2014 |
Aβ(1–42) fibril structure illuminates self-recognition and replication of amyloid in Alzheimer's disease
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May 2015 |
Dynamics of locking of peptides onto growing amyloid fibrils
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July 2009 |
Protein Misfolding, Functional Amyloid, and Human Disease
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June 2006 |
Selective cytotoxicity of intracellular amyloid β peptide1–42 through p53 and Bax in cultured primary human neurons
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January 2002 |
Computational Study on the Structural Diversity of Amyloid Beta Peptide (Aβ 10 - 35 ) Oligomers
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March 2008 |
Monomeric Aβ 1–40 and Aβ 1–42 Peptides in Solution Adopt Very Similar Ramachandran Map Distributions That Closely Resemble Random Coil
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January 2016 |
Amyloid beta-protein monomer structure: A computational and experimental study
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February 2006 |
Amyloid pores from pathogenic mutations
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July 2002 |
High-Resolution Structures of the Amyloid-β 1–42 Dimers from the Comparison of Four Atomistic Force Fields
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June 2017 |
Comparative Studies of Disordered Proteins with Similar Sequences: Application to Aβ40 and Aβ42
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April 2013 |
Natural Oligomers of the Alzheimer Amyloid- Protein Induce Reversible Synapse Loss by Modulating an NMDA-Type Glutamate Receptor-Dependent Signaling Pathway
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March 2007 |
In silico study of amyloid -protein folding and oligomerization
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December 2004 |
Atomic-resolution structure of a disease-relevant Aβ(1–42) amyloid fibril
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July 2016 |
Amyloid-β protein oligomerization and the importance of tetramers and dodecamers in the aetiology of Alzheimer's disease
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June 2009 |
Characterization of cerebrospinal fluid aminoterminally truncated and oxidized amyloid-β peptides
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April 2012 |
Improved side-chain torsion potentials for the Amber ff99SB protein force field
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January 2010 |
Millisecond-scale molecular dynamics simulations on Anton
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conference
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January 2009 |
Significant Structural Differences between Transient Amyloid-β Oligomers and Less-Toxic Fibrils in Regions Known To Harbor Familial Alzheimer′s Mutations
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journal
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April 2014 |
Single-molecule studies of intrinsically disordered proteins
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text
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January 2014 |
Structural Characterization and Inhibition of Toxic Amyloid-β Oligomeric Intermediates
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journal
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July 2013 |
Common mechanisms of amyloid oligomer pathogenesis in degenerative disease
|
journal
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April 2006 |
AMPAR Removal Underlies Aβ-Induced Synaptic Depression and Dendritic Spine Loss
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journal
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December 2006 |
Aβ(1–42) fibril structure illuminates self-recognition and replication of amyloid in Alzheimer's disease
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journal
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May 2015 |
Self-Propagating, Molecular-Level Polymorphism in Alzheimer's -Amyloid Fibrils
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January 2005 |