Soil Microbial Networks Shift Across a High-Elevation Successional Gradient

Farrer, Emily C.; Porazinska, Dorota L.; Spasojevic, Marko J.; King, Andrew J.; Bueno de Mesquita, Clifton P.; Sartwell, Samuel A.; Smith, Jane G.; White, Caitlin T.; Schmidt, Steven K.; Suding, Katharine N.

doi:10.3389/fmicb.2019.02887

Title: Soil Microbial Networks Shift Across a High-Elevation Successional Gradient

Journal Article · 18 December 2019 · Frontiers in Microbiology

DOI: https://doi.org/10.3389/fmicb.2019.02887 · OSTI ID:1628182

Farrer, Emily C. ^[1]; Porazinska, Dorota L. ^[2]; Spasojevic, Marko J. ^[3]; King, Andrew J. ^[4]; Bueno de Mesquita, Clifton P. ^[5]; Sartwell, Samuel A. ^[6]; Smith, Jane G. ^[7]; White, Caitlin T. ^[6]; Schmidt, Steven K. ^[8]; Suding, Katharine N. ^[6]

Tulane Univ., New Orleans, LA (United States). Dept. of Ecology and Evolutionary Biology; Univ. of Colorado, Boulder, CO (United States). Institute of Arctic and Alpine Research; DOE/OSTI
Univ. of Florida, Gainesville, FL (United States). Dept. of Entomology and Nematology
Univ. of Colorado, Boulder, CO (United States). Institute of Arctic and Alpine Research; Univ. of California, Riverside, CA (United States). Dept. of Evolution, Ecology, and Organismal Biology
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Biosciences Division; King Ecological Consulting, Knoxville, TN (United States)
Univ. of Colorado, Boulder, CO (United States). Institute of Arctic and Alpine Research; Univ. of Colorado, Boulder, CO (United States). Dept. of Ecology and Evolutionary Biology
Univ. of Colorado, Boulder, CO (United States). Institute of Arctic and Alpine Research; Univ. of Colorado, Boulder, CO (United States). Dept. of Ecology and Evolutionary Biology
Univ. of Colorado, Boulder, CO (United States). Institute of Arctic and Alpine Research
Univ. of Colorado, Boulder, CO (United States). Dept. of Ecology and Evolutionary Biology

While it is well established that microbial composition and diversity shift along environmental gradients, how interactions among microbes change is poorly understood. Here, we tested how community structure and species interactions among diverse groups of soil microbes (bacteria, fungi, non-fungal eukaryotes) change across a fundamental ecological gradient, succession. Our study system is a high-elevation alpine ecosystem that exhibits variability in successional stage due to topography and harsh environmental conditions. We used hierarchical Bayesian joint distribution modeling to remove the influence of environmental covariates on species distributions and generated interaction networks using the residual species-to-species variance-covariance matrix. We hypothesized that as ecological succession proceeds, diversity will increase, species composition will change, and soil microbial networks will become more complex. As expected, we found that diversity of most taxonomic groups increased over succession, and species composition changed considerably. Interestingly, and contrary to our hypothesis, interaction networks became less complex over succession (fewer interactions per taxon). Interactions between photosynthetic microbes and any other organism became less frequent over the gradient, whereas interactions between plants or soil microfauna and any other organism were more abundant in late succession. Results demonstrate that patterns in diversity and composition do not necessarily relate to patterns in network complexity and suggest that network analyses provide new insight into the ecology of highly diverse, microscopic communities.

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Research Organization:: Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE

Grant/Contract Number:: AC05-00OR22725

OSTI ID:: 1628182

Journal Information:: Frontiers in Microbiology, Journal Name: Frontiers in Microbiology Vol. 10; ISSN 1664-302X

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: United States

Language:: English

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Krona plots from Soil microbial networks shift across a high-elevation successional gradient, Frontiers in Microbiology Farrer, Emily figshare https://doi.org/10.6084/m9.figshare.9971552.v1	image	January 2019
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