Soil Microbiome Dynamics During Pyritic Mine Tailing Phytostabilization: Understanding Microbial Bioindicators of Soil Acidification

Hottenstein, John D.; Neilson, Julie W.; Gil-Loaiza, Juliana; Root, Robert A.; White, Scott A.; Chorover, Jon; Maier, Raina M.

doi:10.3389/fmicb.2019.01211

Title: Soil Microbiome Dynamics During Pyritic Mine Tailing Phytostabilization: Understanding Microbial Bioindicators of Soil Acidification

Journal Article · 05 June 2019 · Frontiers in Microbiology

DOI: https://doi.org/10.3389/fmicb.2019.01211 · OSTI ID:1628178

Hottenstein, John D. ^[1]; Neilson, Julie W. ^[1]; Gil-Loaiza, Juliana ^[1]; Root, Robert A. ^[1]; White, Scott A. ^[1]; Chorover, Jon ^[1]; Maier, Raina M. ^[1]

Univ. of Arizona, Tucson, AZ (United States)

Challenges to the reclamation of pyritic mine tailings arise from in situ acid generation that severely constrains the growth of natural revegetation. While acid mine drainage (AMD) microbial communities are well-studied under highly acidic conditions, fewer studies document the dynamics of microbial communities that generate acid from pyritic material under less acidic conditions that can allow establishment and support of plant growth. This research characterizes the taxonomic composition dynamics of microbial communities present during a 6-year compost-assisted phytostabilization field study in extremely acidic pyritic mine tailings. A complementary microcosm experiment was performed to identify successional community populations that enable the acidification process across a pH gradient. Taxonomic profiles of the microbial populations in both the field study and microcosms reveal shifts in microbial communities that play pivotal roles in facilitating acidification during the transition between moderately and highly acidic conditions. The potential co-occurrence of organoheterotrophic and lithoautotrophic energy metabolisms during acid generation suggests the importance of both groups in facilitating acidification. Taken together, this research suggests that key microbial populations associated with pH transitions could be used as bioindicators for either sustained future plant growth or for acid generation conditions that inhibit further plant growth.

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Research Organization:: SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States). Stanford Synchrotron Radiation Lightsource (SSRL)

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES); National Institute of Environmental and Health Sciences (NIEHS)

Grant/Contract Number:: AC02-76SF00515; P42 ES004940

OSTI ID:: 1628178

Journal Information:: Frontiers in Microbiology, Vol. 10; ISSN 1664-302X

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: United States

Language:: English

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Vegetation successfully prevents oxidization of sulfide minerals in mine tailings Li, Yang; Sun, Qingye; Zhan, Jing Journal of Environmental Management, Vol. 177 https://doi.org/10.1016/j.jenvman.2016.04.026	journal	July 2016
Artificial soil microcosms: a tool for studying microbial autecology under controlled conditions Ellis, Richard J. Journal of Microbiological Methods, Vol. 56, Issue 2 https://doi.org/10.1016/j.mimet.2003.10.005	journal	February 2004
Environmental factors influencing the structural dynamics of soil microbial communities during assisted phytostabilization of acid-generating mine tailings: A mesocosm experiment Valentín-Vargas, Alexis; Root, Robert A.; Neilson, Julia W. Science of The Total Environment, Vol. 500-501 https://doi.org/10.1016/j.scitotenv.2014.08.107	journal	December 2014
Phytostabilization of mine tailings using compost-assisted direct planting: Translating greenhouse results to the field Gil-Loaiza, Juliana; White, Scott A.; Root, Robert A. Science of The Total Environment, Vol. 565 https://doi.org/10.1016/j.scitotenv.2016.04.168	journal	September 2016
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Ecological restoration alters microbial communities in mine tailings profiles Li, Yang; Jia, Zhongjun; Sun, Qingye Scientific Reports, Vol. 6, Issue 1 https://doi.org/10.1038/srep25193	journal	April 2016
Revegetation of Pb/Zn Mine Tailings, Guangdong Province, China Ye, Z. H.; Wong, J. W. C.; Wong, M. H. Restoration Ecology, Vol. 8, Issue 1 https://doi.org/10.1046/j.1526-100x.2000.80012.x	journal	March 2000
Physiological characteristics of thiobacillus ferrooxidans and leptospirillum ferrooxidans and physicochemical factors influence microbial metal leaching Hallmann, Regine; Friedrich, Andrea; Koops, Hans‐Peter Geomicrobiology Journal, Vol. 10, Issue 3-4 https://doi.org/10.1080/01490459209377920	journal	July 1992
Toward a New Paradigm for Tailings Phytostabilization—Nature of the Substrates, Amendment Options, and Anthropogenic Pedogenesis Li, Xiaofang; Huang, Longbin Critical Reviews in Environmental Science and Technology, Vol. 45, Issue 8 https://doi.org/10.1080/10643389.2014.921977	journal	December 2014
A review: Pyrite oxidation mechanisms and acid mine drainage prevention Evangelou, V. P. (Bill); Zhang, Y. L. Critical Reviews in Environmental Science and Technology, Vol. 25, Issue 2 https://doi.org/10.1080/10643389509388477	journal	May 1995
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59 BASIC BIOLOGICAL SCIENCES
54 ENVIRONMENTAL SCIENCES
58 GEOSCIENCES
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
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