SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
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journal
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September 2010 |
Nitrifier denitrification as a distinct and significant source of nitrous oxide from soil
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journal
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January 2011 |
SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
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journal
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September 2010 |
Nitrifier denitrification as a distinct and significant source of nitrous oxide from soil
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journal
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January 2011 |
Higher diversity and abundance of denitrifying microorganisms in environments than considered previously
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journal
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March 2015 |
ROCker: accurate detection and quantification of target genes in short-read metagenomic data sets by modeling sliding-window bitscores
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journal
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October 2016 |
Nitrous Oxide (N2O): The Dominant Ozone-Depleting Substance Emitted in the 21st Century
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journal
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August 2009 |
Dosage-Dependent Proteome Response of Shewanella oneidensis MR-1 to Acute Chromate Challenge
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journal
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May 2007 |
Mimicking climate warming effects on Alaskan soil microbial communities via gradual temperature increase
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journal
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May 2020 |
Comammox—a newly discovered nitrification process in the terrestrial nitrogen cycle
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journal
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October 2017 |
Physiology and Diversity of Ammonia-Oxidizing Archaea
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journal
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October 2012 |
Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil
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journal
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July 2009 |
Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses
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journal
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July 2013 |
Absolute quantification of Dehalococcoides proteins: enzyme bioindicators of chlorinated ethene dehalorespiration
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journal
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October 2009 |
Archaea rather than bacteria control nitrification in two agricultural acidic soils: Archaeal nitrification in acidic soils
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journal
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October 2010 |
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
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journal
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June 2007 |
Archaea rather than bacteria control nitrification in two agricultural acidic soils: Archaeal nitrification in acidic soils
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journal
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October 2010 |
Microbial metatranscriptomics in a permanent marine oxygen minimum zone: OMZ community gene expression
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journal
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January 2011 |
Coriander Genomics Database: a genomic, transcriptomic, and metabolic database for coriander
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journal
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April 2020 |
Absolute quantification of Dehalococcoides proteins: enzyme bioindicators of chlorinated ethene dehalorespiration
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journal
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October 2009 |
Measuring gross nitrogen mineralization, and nitrification by 15 N isotopic pool dilution in intact soil cores
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journal
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September 1991 |
Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage
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journal
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November 2010 |
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
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journal
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August 2006 |
The consequences of niche and physiological differentiation of archaeal and bacterial ammonia oxidisers for nitrous oxide emissions
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journal
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January 2018 |
Functional analysis of natural microbial consortia using community proteomics
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journal
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March 2009 |
Coupling a Detergent Lysis/Cleanup Methodology with Intact Protein Fractionation for Enhanced Proteome Characterization
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journal
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October 2012 |
Pathways and key intermediates required for obligate aerobic ammonia-dependent chemolithotrophy in bacteria and Thaumarchaeota
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journal
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February 2016 |
Plant and Microbial Controls on Nitrogen Retention and loss in a Humid Tropical Forest
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journal
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November 2008 |
Evaluation of metatranscriptomic protocols and application to the study of freshwater microbial communities: Metatranscriptomics of freshwater communities
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journal
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June 2014 |
The microbial nitrogen-cycling network
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journal
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February 2018 |
Impact of elevated N input on soil N cycling and losses in old-growth lowland and montane forests in Panama
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journal
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June 2010 |
Ammonia oxidation pathways and nitrifier denitrification are significant sources of N2O and NO under low oxygen availability
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journal
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April 2013 |
Dosage-Dependent Proteome Response of Shewanella oneidensis MR-1 to Acute Chromate Challenge
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journal
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May 2007 |
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
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journal
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April 2012 |
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
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journal
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April 2012 |
Microbial metaproteomics: identifying the repertoire of proteins that microorganisms use to compete and cooperate in complex environmental communities
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journal
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June 2012 |
pH regulates key players of nitrification in paddy soils
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journal
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February 2015 |
Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets
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journal
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October 2013 |
Evaluation of methods for nitrogen‐15 analysis of inorganic nitrogen in soil extracts. II. Diffusion methods
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journal
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June 1995 |
Comparative metagenomic and metatranscriptomic analyses of microbial communities in acid mine drainage
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journal
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December 2014 |
Accelerated Profile HMM Searches
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journal
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October 2011 |
Complete nitrification by Nitrospira bacteria
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journal
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November 2015 |
Complete nitrification by Nitrospira bacteria
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journal
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November 2015 |
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
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journal
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October 2012 |
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
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journal
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March 2015 |
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
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journal
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October 2012 |
Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets
|
journal
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October 2013 |
Comparative metagenomic and metatranscriptomic analyses of microbial communities in acid mine drainage
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journal
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December 2014 |
Accelerated Profile HMM Searches
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journal
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October 2011 |
The consequences of niche and physiological differentiation of archaeal and bacterial ammonia oxidisers for nitrous oxide emissions
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journal
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January 2018 |
FunGene: the functional gene pipeline and repository
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journal
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January 2013 |
Microbially mediated nitrogen retention and loss in a salt marsh soil
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journal
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January 2015 |
The soil N cycle: new insights and key challenges
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journal
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January 2015 |
Complete nitrification by a single microorganism
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journal
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November 2015 |
The activity level of a microbial community function can be predicted from its metatranscriptome
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journal
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November 2011 |
UniProt: a hub for protein information
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journal
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October 2014 |
Detecting Nitrous Oxide Reductase (nosZ) Genes in Soil Metagenomes: Method Development and Implications for the Nitrogen Cycle
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journal
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June 2014 |
BLAST+: architecture and applications
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journal
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January 2009 |
pH regulates key players of nitrification in paddy soils
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journal
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February 2015 |
Next generation sequencing reveals limitation of qPCR methods in quantifying emerging antibiotic resistance genes (ARGs) in the environment
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journal
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March 2021 |
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
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journal
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October 2013 |
Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega
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journal
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January 2011 |
Genetic basis for the establishment of endosymbiosis in Paramecium
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journal
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January 2019 |
New and improved proteomics technologies for understanding complex biological systems: Addressing a grand challenge in the life sciences
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journal
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September 2012 |
Molecular Dynamics of the Shewanella oneidensis Response to Chromate Stress
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journal
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March 2006 |
Measuring gross nitrogen mineralization, and nitrification by 15 N isotopic pool dilution in intact soil cores
|
journal
|
September 1991 |
Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil
|
journal
|
July 2009 |
Evaluation of metatranscriptomic protocols and application to the study of freshwater microbial communities: Metatranscriptomics of freshwater communities
|
journal
|
June 2014 |
Quantifying the changes in genetic diversity within sequence-discrete bacterial populations across a spatial and temporal riverine gradient
|
journal
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November 2018 |
The microbial nitrogen-cycling network
|
journal
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February 2018 |
FunGene: the functional gene pipeline and repository
|
journal
|
January 2013 |
Pathways and key intermediates required for obligate aerobic ammonia-dependent chemolithotrophy in bacteria and Thaumarchaeota
|
journal
|
February 2016 |
Plant and Microbial Controls on Nitrogen Retention and loss in a Humid Tropical Forest
|
journal
|
November 2008 |
Coupling a Detergent Lysis/Cleanup Methodology with Intact Protein Fractionation for Enhanced Proteome Characterization
|
journal
|
October 2012 |
UniProt: a hub for protein information
|
journal
|
October 2014 |
Complete nitrification by a single microorganism
|
journal
|
November 2015 |
Nitrous Oxide (N2O): The Dominant Ozone-Depleting Substance Emitted in the 21st Century
|
journal
|
August 2009 |
Refined NrfA Phylogeny Improves PCR-Based nrfA Gene Detection
|
journal
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January 2014 |
Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage
|
journal
|
November 2010 |
Higher diversity and abundance of denitrifying microorganisms in environments than considered previously
|
journal
|
March 2015 |
Physiology and Diversity of Ammonia-Oxidizing Archaea
|
journal
|
October 2012 |
Comammox—a newly discovered nitrification process in the terrestrial nitrogen cycle
|
journal
|
October 2017 |
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
|
journal
|
March 2015 |
Microbial metaproteomics: identifying the repertoire of proteins that microorganisms use to compete and cooperate in complex environmental communities
|
journal
|
June 2012 |
Year-Round Shotgun Metagenomes Reveal Stable Microbial Communities in Agricultural Soils and Novel Ammonia Oxidizers Responding to Fertilization
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journal
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November 2017 |
Impact of elevated N input on soil N cycling and losses in old-growth lowland and montane forests in Panama
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collection
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January 2016 |