Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets
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January 2017 |
Differential responses of soil bacterial taxa to long-term P, N, and organic manure application
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December 2015 |
Microdiversity of extracellular enzyme genes among sequenced prokaryotic genomes
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January 2013 |
Fundamentals of Microbial Community Resistance and Resilience
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January 2012 |
The Nitrogen Cascade
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January 2003 |
Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
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September 2016 |
UPARSE: highly accurate OTU sequences from microbial amplicon reads
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August 2013 |
Keystone taxa predict compositional change in microbial communities
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June 2018 |
Succession of endophytic fungi and arbuscular mycorrhizal fungi associated with the growth of plant and their correlation with secondary metabolites in the roots of plants
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April 2021 |
Microbiomes in light of traits: A phylogenetic perspective
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November 2015 |
Lateral genomics
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December 1999 |
Phylogenetic organization of bacterial activity
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March 2016 |
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
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June 2007 |
Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups
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June 2012 |
Effect of different levels of nitrogen on rhizosphere bacterial community structure in intensive monoculture of greenhouse lettuce
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April 2016 |
Datura genome reveals duplications of psychoactive alkaloid biosynthetic genes and high mutation rate following tissue culture
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March 2021 |
Microbial abundance and composition influence litter decomposition response to environmental change
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March 2013 |
Climatic oscillations in Quaternary have shaped the co-evolutionary patterns between the Norway spruce and its host-associated herbivore
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October 2020 |
Taxonomic patterns in the nitrogen assimilation of soil prokaryotes: Nitrogen assimilation of soil prokaryotes
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March 2018 |
Global assessment of nitrogen deposition effects on terrestrial plant diversity: a synthesis
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January 2010 |
Microbial response to simulated global change is phylogenetically conserved and linked with functional potential
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June 2015 |
Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe
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August 2015 |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
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January 2014 |
Influence of 34-years of fertilization on bacterial communities in an intensively cultivated black soil in northeast China
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November 2015 |
Global nitrogen deposition and carbon sinks
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June 2008 |
Mating pair stabilization mediates bacterial conjugation species specificity
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June 2022 |
Predicting changes in community composition and ecosystem functioning from plant traits: revisiting the Holy Grail
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October 2002 |
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
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December 2011 |
Soil microbial community structure is unaltered by plant invasion, vegetation clipping, and nitrogen fertilization in experimental semi-arid grasslands
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May 2015 |
Microbial abundance and composition influence litter decomposition response to environmental change
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March 2013 |
QIIME allows analysis of high-throughput community sequencing data
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April 2010 |
Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes
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journal
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February 2012 |
Using DECIPHER v2.0 to Analyze Big Biological Sequence Data in R
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January 2016 |
Microbiomes in light of traits: A phylogenetic perspective
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November 2015 |
Spatial scale drives patterns in soil bacterial diversity: Spatial scale drives soil diversity
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journal
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March 2016 |
Nitrogen deposition and management practices increase soil microbial biomass carbon but decrease diversity in Moso bamboo plantations
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June 2016 |
Infant gut microbiota characteristics generally do not modify effects of lipid-based nutrient supplementation on growth or inflammation: secondary analysis of a randomized controlled trial in Malawi
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September 2020 |
Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets
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journal
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January 2017 |
The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling
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journal
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November 2008 |
Fundamentals of Microbial Community Resistance and Resilience
|
journal
|
January 2012 |
Differential responses of soil bacterial taxa to long-term P, N, and organic manure application
|
journal
|
December 2015 |
Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe
|
journal
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August 2015 |
The Microbiome Stress Project: Toward a Global Meta-Analysis of Environmental Stressors and Their Effects on Microbial Communities
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journal
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January 2019 |
Microdiversity of extracellular enzyme genes among sequenced prokaryotic genomes
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journal
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January 2013 |
Taxonomic patterns in the nitrogen assimilation of soil prokaryotes: Nitrogen assimilation of soil prokaryotes
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journal
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March 2018 |
Climate change alters ecological strategies of soil bacteria
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journal
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November 2013 |
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
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journal
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December 2014 |
Microbial response to simulated global change is phylogenetically conserved and linked with functional potential
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journal
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June 2015 |
Nitrogen deposition and management practices increase soil microbial biomass carbon but decrease diversity in Moso bamboo plantations
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journal
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June 2016 |
Phylogenetic organization of bacterial activity
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journal
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March 2016 |
Selectivity in Mammalian Extinction Risk and Threat Types: a New Measure of Phylogenetic Signal Strength in Binary Traits: Selectivity in Extinction Risk
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February 2010 |
Bacterial, fungal, and plant communities exhibit no biomass or compositional response to two years of simulated nitrogen deposition in a semiarid grassland: Bacterial, fungal, and plant communities
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journal
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March 2017 |
Resistance, resilience, and redundancy in microbial communities
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journal
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August 2008 |
Phylogenetic conservatism of functional traits in microorganisms
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journal
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December 2012 |
Updating Prokaryotic Taxonomy
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journal
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September 2005 |
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
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journal
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December 2011 |
Comparative Genomics of Nitrogen Cycling Pathways in Bacteria and Archaea
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August 2018 |
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
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journal
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April 2013 |
UPARSE: highly accurate OTU sequences from microbial amplicon reads
|
journal
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August 2013 |
Influence of 34-years of fertilization on bacterial communities in an intensively cultivated black soil in northeast China
|
journal
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November 2015 |
Assessing Phylogenetic Signal with Measurement Error: a Comparison of Mantel Tests, Blomberg et Al.'S k, and Phylogenetic Distograms
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journal
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April 2012 |
Comparative Genomics of Nitrogen Cycling Pathways in Bacteria and Archaea
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journal
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August 2018 |
Global nitrogen deposition and carbon sinks
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journal
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June 2008 |
Global assessment of nitrogen deposition effects on terrestrial plant diversity: a synthesis
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journal
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January 2010 |
Towards a Genome-Based Taxonomy for Prokaryotes
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journal
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September 2005 |
phangorn: phylogenetic analysis in R
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journal
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December 2010 |
Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes
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journal
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February 2012 |
Assessing Phylogenetic Signal with Measurement Error: a Comparison of Mantel Tests, Blomberg et Al.'S k, and Phylogenetic Distograms
|
journal
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April 2012 |
Spatial scale drives patterns in soil bacterial diversity: Spatial scale drives soil diversity
|
journal
|
March 2016 |
Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups
|
journal
|
June 2012 |
Selectivity in Mammalian Extinction Risk and Threat Types: a New Measure of Phylogenetic Signal Strength in Binary Traits: Selectivity in Extinction Risk
|
journal
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February 2010 |
Scaling environmental change through the community-level: a trait-based response-and-effect framework for plants
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journal
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May 2008 |
Phylogenetic conservatism of functional traits in microorganisms
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journal
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December 2012 |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
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text
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January 2014 |
Agricultural management practices influence the soil enzyme activity and bacterial community structure in tea plantations
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journal
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May 2021 |
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
|
journal
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December 2014 |
The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling
|
journal
|
November 2008 |
Bacterial, fungal, and plant communities exhibit no biomass or compositional response to two years of simulated nitrogen deposition in a semiarid grassland: Bacterial, fungal, and plant communities
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journal
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March 2017 |