An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1T

Nicholson, Wayne L.; Davis, Christina L.; Shapiro, Nicole; Huntemann, Marcel; Clum, Alicia; Reddy, T. B. K.; Pillay, Manoj; Markowitz, Victor; Varghese, Neha; Pati, Amrita; Ivanova, Natalia; Kyrpides, Nikos; Woyke, Tanja

doi:10.1186/s40793-016-0193-3

Title: An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1T

Journal Article · 08 September 2016 · Standards in Genomic Sciences

DOI: https://doi.org/10.1186/s40793-016-0193-3 · OSTI ID:1618969

Nicholson, Wayne L.; Davis, Christina L.; Shapiro, Nicole; Huntemann, Marcel; Clum, Alicia; Reddy, T. B. K.; Pillay, Manoj; Markowitz, Victor; Varghese, Neha; Pati, Amrita; Ivanova, Natalia; Kyrpides, Nikos; Woyke, Tanja

Abstract Despite their ubiquity and their involvement in food spoilage, the genus Carnobacterium remains rather sparsely characterized at the genome level. Carnobacterium inhibens K1 ^T is a member of the Carnobacteriaceae family within the class Bacilli . This strain is a Gram-positive, rod-shaped bacterium isolated from the intestine of an Atlantic salmon. The present study determined the genome sequence and annotation of Carnobacterium inhibens K1 ^T . The genome comprised 2,748,608 bp with a G + C content of 34.85 %, which included 2621 protein-coding genes and 116 RNA genes. The strain contained five contigs corresponding to presumptive plasmids of sizes: 19,036; 24,250; 26,581; 65,272; and 65,904 bp.

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Sponsoring Organization:: USDOE

OSTI ID:: 1618969

Journal Information:: Standards in Genomic Sciences, Journal Name: Standards in Genomic Sciences Journal Issue: 1 Vol. 11; ISSN 1944-3277

Publisher:: Springer Science + Business MediaCopyright Statement

Country of Publication:: United Kingdom

Language:: English

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