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Title: Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts

Authors:
; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ;
Publication Date:
Research Org.:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
OSTI Identifier:
1618688
Alternate Identifier(s):
OSTI ID: 1421836; OSTI ID: 1431028
Grant/Contract Number:  
AC02-05CH11231; AC05-76RL01830
Resource Type:
Published Article
Journal Name:
Biotechnology for Biofuels
Additional Journal Information:
Journal Name: Biotechnology for Biofuels Journal Volume: 10 Journal Issue: 1; Journal ID: ISSN 1754-6834
Publisher:
Springer Science + Business Media
Country of Publication:
Netherlands
Language:
English
Subject:
09 BIOMASS FUELS; Rhodosporidium toruloides; Terpenes; Bisabolene; Amorphadiene; Heterologous expression; Plant biomass-derived hydrolysate; Multiple carbon source utilization

Citation Formats

Yaegashi, Junko, Kirby, James, Ito, Masakazu, Sun, Jian, Dutta, Tanmoy, Mirsiaghi, Mona, Sundstrom, Eric R., Rodriguez, Alberto, Baidoo, Edward, Tanjore, Deepti, Pray, Todd, Sale, Kenneth, Singh, Seema, Keasling, Jay D., Simmons, Blake A., Singer, Steven W., Magnuson, Jon K., Arkin, Adam P., Skerker, Jeffrey M., and Gladden, John M. Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts. Netherlands: N. p., 2017. Web. doi:10.1186/s13068-017-0927-5.
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Yaegashi, Junko, Kirby, James, Ito, Masakazu, Sun, Jian, Dutta, Tanmoy, Mirsiaghi, Mona, Sundstrom, Eric R., Rodriguez, Alberto, Baidoo, Edward, Tanjore, Deepti, Pray, Todd, Sale, Kenneth, Singh, Seema, Keasling, Jay D., Simmons, Blake A., Singer, Steven W., Magnuson, Jon K., Arkin, Adam P., Skerker, Jeffrey M., & Gladden, John M. Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts. Netherlands. https://doi.org/10.1186/s13068-017-0927-5
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Yaegashi, Junko, Kirby, James, Ito, Masakazu, Sun, Jian, Dutta, Tanmoy, Mirsiaghi, Mona, Sundstrom, Eric R., Rodriguez, Alberto, Baidoo, Edward, Tanjore, Deepti, Pray, Todd, Sale, Kenneth, Singh, Seema, Keasling, Jay D., Simmons, Blake A., Singer, Steven W., Magnuson, Jon K., Arkin, Adam P., Skerker, Jeffrey M., and Gladden, John M. Mon . "Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts". Netherlands. https://doi.org/10.1186/s13068-017-0927-5.
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@article{osti_1618688,
title = {Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts},
author = {Yaegashi, Junko and Kirby, James and Ito, Masakazu and Sun, Jian and Dutta, Tanmoy and Mirsiaghi, Mona and Sundstrom, Eric R. and Rodriguez, Alberto and Baidoo, Edward and Tanjore, Deepti and Pray, Todd and Sale, Kenneth and Singh, Seema and Keasling, Jay D. and Simmons, Blake A. and Singer, Steven W. and Magnuson, Jon K. and Arkin, Adam P. and Skerker, Jeffrey M. and Gladden, John M.},
abstractNote = {},
doi = {10.1186/s13068-017-0927-5},
journal = {Biotechnology for Biofuels},
number = 1,
volume = 10,
place = {Netherlands},
year = {Mon Oct 23 00:00:00 EDT 2017},
month = {Mon Oct 23 00:00:00 EDT 2017}
}
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Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1186/s13068-017-0927-5
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Citation Metrics:
Cited by: 97 works
Citation information provided by
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Figures / Tables:

Fig. 1 Fig. 1 : Schematic of R. toruloides as a new platform for the production of lignocellulosic biofuels and bioproducts
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    Works referencing / citing this record:

    A toolset of constitutive promoters for metabolic engineering of Rhodosporidium toruloides
    journal, June 2019

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    Proteome analysis of xylose metabolism in Rhodotorula toruloides during lipid production
    journal, June 2019

    • Tiukova, Ievgeniia A.; Brandenburg, Jule; Blomqvist, Johanna
    • Biotechnology for Biofuels, Vol. 12, Issue 1
    • DOI: 10.1186/s13068-019-1478-8

    Growing a circular economy with fungal biotechnology: a white paper
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    • Fungal Biology and Biotechnology, Vol. 7, Issue 1
    • DOI: 10.1186/s40694-020-00095-z

    Development of a CRISPR/Cas9 system for high efficiency multiplexed gene deletion in Rhodosporidium toruloides
    journal, May 2019

    • Schultz, J. Carl; Cao, Mingfeng; Zhao, Huimin
    • Biotechnology and Bioengineering, Vol. 116, Issue 8
    • DOI: 10.1002/bit.27001

    Mapping the diversity of microbial lignin catabolism: experiences from the eLignin database
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    • Brink, Daniel P.; Ravi, Krithika; Lidén, Gunnar
    • Applied Microbiology and Biotechnology, Vol. 103, Issue 10
    • DOI: 10.1007/s00253-019-09692-4

    Developing a flippase-mediated maker recycling protocol for the oleaginous yeast Rhodosporidium toruloides
    journal, March 2018

    Modular biomanufacturing for a sustainable production of terpenoid-based insect deterrents
    journal, January 2018

    • Mischko, Wolfgang; Hirte, Max; Roehrer, Simon
    • Green Chemistry, Vol. 20, Issue 11
    • DOI: 10.1039/c8gc00434j

    Integrated diesel production from lignocellulosic sugars via oleaginous yeast
    journal, January 2018

    • Sànchez i. Nogué, Violeta; Black, Brenna A.; Kruger, Jacob S.
    • Green Chemistry, Vol. 20, Issue 18
    • DOI: 10.1039/c8gc01905c

    Expression of phosphotransacetylase in Rhodosporidium toruloides leading to improved cell growth and lipid production
    journal, January 2018

    • Yang, Xiaobing; Sun, Wenyi; Shen, Hongwei
    • RSC Advances, Vol. 8, Issue 43
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    RNA interference in the oleaginous yeast Rhodosporidium toruloides
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    • Liu, Xiangjian; Zhang, Yue; Liu, Hongdi
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    • DOI: 10.1093/femsyr/foz031

    Multiplexed CRISPR-Cas9-Based Genome Editing of Rhodosporidium toruloides
    journal, March 2019

    Genomewide and Enzymatic Analysis Reveals Efficient D-Galacturonic Acid Metabolism in the Basidiomycete Yeast Rhodosporidium toruloides
    journal, December 2019

    A snapshot of microbial diversity and function in an undisturbed sugarcane bagasse pile
    journal, February 2020

    Engineering the oleaginous yeast Yarrowia lipolytica to produce the aroma compound β-ionone
    journal, September 2018

    • Czajka, Jeffrey J.; Nathenson, Justin A.; Benites, Veronica T.
    • Microbial Cell Factories, Vol. 17, Issue 1
    • DOI: 10.1186/s12934-018-0984-x

    Systems analysis of phosphate-limitation-induced lipid accumulation by the oleaginous yeast Rhodosporidium toruloides
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    A rapid methods development workflow for high-throughput quantitative proteomic applications
    journal, February 2019

    Microbial Platform for Terpenoid Production: Escherichia coli and Yeast
    journal, October 2018

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      Figures / Tables found in this record:

      Fig. 1 (p. 4)figure
      Table 1 (p. 4)table
      Fig. 2 (p. 7)figure
      Fig. 3 (p. 8)figure
      Fig. 4 (p. 8)figure
      Table 2 (p. 8)table
      Fig. 5 (p. 9)figure
      Fig. 6 (p. 10)figure
      Table 3 (p. 10)table
      Fig. 7 (p. 11)figure
      Fig. 8 (p. 12)figure
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