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Title: Overexpression of a Domain of Unknown Function 266-containing protein results in high cellulose content, reduced recalcitrance, and enhanced plant growth in the bioenergy crop Populus

Authors:
; ; ; ; ; ; ; ; ; ; ; ; ; ORCiD logo
Publication Date:
Research Org.:
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). BioEnergy Science Center (BESC); Joint Institute for Biological Sciences (JIBS)
Sponsoring Org.:
USDOE Office of Science (SC)
OSTI Identifier:
1618674
Alternate Identifier(s):
OSTI ID: 1356900
Grant/Contract Number:  
AC05-00OR22725
Resource Type:
Published Article
Journal Name:
Biotechnology for Biofuels
Additional Journal Information:
Journal Name: Biotechnology for Biofuels Journal Volume: 10 Journal Issue: 1; Journal ID: ISSN 1754-6834
Publisher:
Springer Science + Business Media
Country of Publication:
Netherlands
Language:
English
Subject:
09 BIOMASS FUELS; 60 APPLIED LIFE SCIENCES; DUF266; recalcitrance; Populus; bioenergy; biofuel; biomass; cell wall; cellulose; sugar release

Citation Formats

Yang, Yongil, Yoo, Chang Geun, Guo, Hao-Bo, Rottmann, William, Winkeler, Kimberly A., Collins, Cassandra M., Gunter, Lee E., Jawdy, Sara S., Yang, Xiaohan, Guo, Hong, Pu, Yunqiao, Ragauskas, Arthur J., Tuskan, Gerald A., and Chen, Jin-Gui. Overexpression of a Domain of Unknown Function 266-containing protein results in high cellulose content, reduced recalcitrance, and enhanced plant growth in the bioenergy crop Populus. Netherlands: N. p., 2017. Web. doi:10.1186/s13068-017-0760-x.
Yang, Yongil, Yoo, Chang Geun, Guo, Hao-Bo, Rottmann, William, Winkeler, Kimberly A., Collins, Cassandra M., Gunter, Lee E., Jawdy, Sara S., Yang, Xiaohan, Guo, Hong, Pu, Yunqiao, Ragauskas, Arthur J., Tuskan, Gerald A., & Chen, Jin-Gui. Overexpression of a Domain of Unknown Function 266-containing protein results in high cellulose content, reduced recalcitrance, and enhanced plant growth in the bioenergy crop Populus. Netherlands. doi:10.1186/s13068-017-0760-x.
Yang, Yongil, Yoo, Chang Geun, Guo, Hao-Bo, Rottmann, William, Winkeler, Kimberly A., Collins, Cassandra M., Gunter, Lee E., Jawdy, Sara S., Yang, Xiaohan, Guo, Hong, Pu, Yunqiao, Ragauskas, Arthur J., Tuskan, Gerald A., and Chen, Jin-Gui. Thu . "Overexpression of a Domain of Unknown Function 266-containing protein results in high cellulose content, reduced recalcitrance, and enhanced plant growth in the bioenergy crop Populus". Netherlands. doi:10.1186/s13068-017-0760-x.
@article{osti_1618674,
title = {Overexpression of a Domain of Unknown Function 266-containing protein results in high cellulose content, reduced recalcitrance, and enhanced plant growth in the bioenergy crop Populus},
author = {Yang, Yongil and Yoo, Chang Geun and Guo, Hao-Bo and Rottmann, William and Winkeler, Kimberly A. and Collins, Cassandra M. and Gunter, Lee E. and Jawdy, Sara S. and Yang, Xiaohan and Guo, Hong and Pu, Yunqiao and Ragauskas, Arthur J. and Tuskan, Gerald A. and Chen, Jin-Gui},
abstractNote = {},
doi = {10.1186/s13068-017-0760-x},
journal = {Biotechnology for Biofuels},
number = 1,
volume = 10,
place = {Netherlands},
year = {2017},
month = {3}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
DOI: 10.1186/s13068-017-0760-x

Citation Metrics:
Cited by: 3 works
Citation information provided by
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Works referenced in this record:

Pectin Biosynthesis: GALS1 in Arabidopsis thaliana Is a β-1,4-Galactan β-1,4-Galactosyltransferase
journal, December 2012

  • Liwanag, April Jennifer Madrid; Ebert, Berit; Verhertbruggen, Yves
  • The Plant Cell, Vol. 24, Issue 12
  • DOI: 10.1105/tpc.112.106625

Arabidopsis thaliana T-DNA Mutants Implicate GAUT Genes in the Biosynthesis of Pectin and Xylan in Cell Walls and Seed Testa
journal, September 2009

  • Caffall, Kerry H.; Pattathil, Sivakumar; Phillips, Sarah E.
  • Molecular Plant, Vol. 2, Issue 5
  • DOI: 10.1093/mp/ssp062

Improved Gateway Binary Vectors: High-Performance Vectors for Creation of Fusion Constructs in Transgenic Analysis of Plants
journal, August 2007

  • Nakagawa, Tsuyoshi; Suzuki, Takamasa; Murata, Satoko
  • Bioscience, Biotechnology, and Biochemistry, Vol. 71, Issue 8
  • DOI: 10.1271/bbb.70216

Hemicelluloses
journal, June 2010


Xylan biosynthesis
journal, April 2014


The Pfam protein families database: towards a more sustainable future
journal, December 2015

  • Finn, Robert D.; Coggill, Penelope; Eberhardt, Ruth Y.
  • Nucleic Acids Research, Vol. 44, Issue D1
  • DOI: 10.1093/nar/gkv1344

Effect of acid-chlorite delignification on cellulose degree of polymerization
journal, October 2010


Cellulose Synthases and Synthesis in Arabidopsis
journal, March 2011

  • Endler, Anne; Persson, Staffan
  • Molecular Plant, Vol. 4, Issue 2
  • DOI: 10.1093/mp/ssq079

Galacturonosyltransferase (GAUT)1 and GAUT7 are the core of a plant cell wall pectin biosynthetic homogalacturonan:galacturonosyltransferase complex
journal, November 2011

  • Atmodjo, M. A.; Sakuragi, Y.; Zhu, X.
  • Proceedings of the National Academy of Sciences, Vol. 108, Issue 50
  • DOI: 10.1073/pnas.1112816108

The plant glycosyltransferase clone collection for functional genomics
journal, July 2014

  • Lao, Jeemeng; Oikawa, Ai; Bromley, Jennifer R.
  • The Plant Journal, Vol. 79, Issue 3
  • DOI: 10.1111/tpj.12577

I-TASSER: a unified platform for automated protein structure and function prediction
journal, March 2010

  • Roy, Ambrish; Kucukural, Alper; Zhang, Yang
  • Nature Protocols, Vol. 5, Issue 4
  • DOI: 10.1038/nprot.2010.5

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
journal, January 1994

  • Thompson, Julie D.; Higgins, Desmond G.; Gibson, Toby J.
  • Nucleic Acids Research, Vol. 22, Issue 22, p. 4673-4680
  • DOI: 10.1093/nar/22.22.4673

De-DUFing the DUFs: Deciphering distant evolutionary relationships of Domains of Unknown Function using sensitive homology detection methods
journal, July 2015


A β-glucuronosyltransferase from Arabidopsis thaliana involved in biosynthesis of type II arabinogalactan has a role in cell elongation during seedling growth
journal, November 2013

  • Knoch, Eva; Dilokpimol, Adiphol; Tryfona, Theodora
  • The Plant Journal, Vol. 76, Issue 6
  • DOI: 10.1111/tpj.12353

Assay and heterologous expression in Pichia pastoris of plant cell wall type-II membrane anchored glycosyltransferases
journal, May 2009

  • Petersen, Bent Larsen; Egelund, Jack; Damager, Iben
  • Glycoconjugate Journal, Vol. 26, Issue 9
  • DOI: 10.1007/s10719-009-9242-0

Initial characterization of shade avoidance response suggests functional diversity between Populus phytochrome B genes
journal, September 2012


Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis
journal, December 2011


Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
journal, January 2001

  • Krogh, Anders; Larsson, Björn; von Heijne, Gunnar
  • Journal of Molecular Biology, Vol. 305, Issue 3
  • DOI: 10.1006/jmbi.2000.4315

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
journal, March 2016

  • Kumar, Sudhir; Stecher, Glen; Tamura, Koichiro
  • Molecular Biology and Evolution, Vol. 33, Issue 7
  • DOI: 10.1093/molbev/msw054

Evolving Views of Pectin Biosynthesis
journal, April 2013


Identification of a Xylogalacturonan Xylosyltransferase Involved in Pectin Biosynthesis in Arabidopsis
journal, May 2008

  • Jensen, J. K.; Sorensen, S. O.; Harholt, J.
  • The Plant Cell, Vol. 20, Issue 5, p. 1289-1302
  • DOI: 10.1105/tpc.107.050906

Plant Glycosyltransferases Beyond CAZy: A Perspective on DUF Families
journal, January 2012


Cellulose Synthesis and Its Regulation
journal, January 2014

  • Li, Shundai; Bashline, Logan; Lei, Lei
  • The Arabidopsis Book, Vol. 12
  • DOI: 10.1199/tab.0169

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
journal, December 1998


Characterizing the Link between Glycosylation State and Enzymatic Activity of the Endo-β1,4-glucanase KORRIGAN1 from Arabidopsis thaliana
journal, June 2013

  • Liebminger, Eva; Grass, Josephine; Altmann, Friedrich
  • Journal of Biological Chemistry, Vol. 288, Issue 31
  • DOI: 10.1074/jbc.M113.475558

Exploring genomes for glycosyltransferases
journal, January 2010

  • Hansen, Sara Fasmer; Bettler, Emmanuel; Rinnan, Åsmund
  • Molecular BioSystems, Vol. 6, Issue 10
  • DOI: 10.1039/c000238k

The Caenorhabditis elegans Genes sqv-2 and sqv-6 , Which Are Required for Vulval Morphogenesis, Encode Glycosaminoglycan Galactosyltransferase II and Xylosyltransferase
journal, February 2003

  • Hwang, Ho-Yon; Olson, Sara K.; Brown, Jillian R.
  • Journal of Biological Chemistry, Vol. 278, Issue 14
  • DOI: 10.1074/jbc.C200518200

The Glycosyltransferase Repertoire of the Spikemoss Selaginella moellendorffii and a Comparative Study of Its Cell Wall
journal, May 2012


Arabidopsis thaliana RGXT1 and RGXT2 Encode Golgi-Localized (1,3)-α-d-Xylosyltransferases Involved in the Synthesis of Pectic Rhamnogalacturonan-II
journal, October 2006

  • Egelund, Jack; Petersen, Bent Larsen; Motawia, Mohammed Saddik
  • The Plant Cell, Vol. 18, Issue 10
  • DOI: 10.1105/tpc.105.036566

Phytozome: a comparative platform for green plant genomics
journal, November 2011

  • Goodstein, David M.; Shu, Shengqiang; Howson, Russell
  • Nucleic Acids Research, Vol. 40, Issue D1
  • DOI: 10.1093/nar/gkr944

Building the wall: genes and enzyme complexes for polysaccharide synthases
journal, December 2001


Storage of competent cells for Agrobacterium transformation
journal, January 1988


The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
journal, January 2009

  • Cantarel, B. L.; Coutinho, P. M.; Rancurel, C.
  • Nucleic Acids Research, Vol. 37, Issue Database
  • DOI: 10.1093/nar/gkn663

MUSCLE: multiple sequence alignment with high accuracy and high throughput
journal, March 2004

  • Edgar, R. C.
  • Nucleic Acids Research, Vol. 32, Issue 5, p. 1792-1797
  • DOI: 10.1093/nar/gkh340

Metabolic profiling reveals altered sugar and secondary metabolism in response to UGPase overexpression in Populus
journal, October 2014

  • Payyavula, Raja S.; Tschaplinski, Timothy J.; Jawdy, Sara S.
  • BMC Plant Biology, Vol. 14, Issue 1
  • DOI: 10.1186/s12870-014-0265-8

Molecular Cloning and Expression of a Novel β-1,6- N -Acetylglucosaminyltransferase That Forms Core 2, Core 4, and I Branches
journal, January 1999

  • Yeh, Jiunn-Chern; Ong, Edgar; Fukuda, Minoru
  • Journal of Biological Chemistry, Vol. 274, Issue 5
  • DOI: 10.1074/jbc.274.5.3215

ARABINAN DEFICIENT 1 Is a Putative Arabinosyltransferase Involved in Biosynthesis of Pectic Arabinan in Arabidopsis
journal, December 2005

  • Harholt, Jesper; Jensen, Jacob Krüger; Sørensen, Susanne Oxenbøll
  • Plant Physiology, Vol. 140, Issue 1
  • DOI: 10.1104/pp.105.072744

Semimicro determination of cellulose inbiological materials
journal, December 1969


ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta
journal, January 2012

  • Harholt, Jesper; Jensen, Jacob Krüger; Verhertbruggen, Yves
  • Planta, Vol. 236, Issue 1, p. 115-128
  • DOI: 10.1007/s00425-012-1592-3

Cellulose Isolation Methodology for NMR Analysis of Cellulose Ultrastructure
journal, November 2011

  • Foston, Marcus B.; Hubbell, Chistopher A.; Ragauskas, Art J.
  • Materials, Vol. 4, Issue 11
  • DOI: 10.3390/ma4111985

Effect of structural and physico-chemical features of cellulosic substrates on the efficiency of enzymatic hydrolysis
journal, July 1991

  • Sinitsyn, A. P.; Gusakov, A. V.; Vlasenko, E. Yu.
  • Applied Biochemistry and Biotechnology, Vol. 30, Issue 1
  • DOI: 10.1007/BF02922023

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method
journal, December 2001


Structures and mechanisms of glycosyltransferases
journal, July 2005

  • Breton, Christelle; Šnajdrová, Lenka; Jeanneau, Charlotte
  • Glycobiology, Vol. 16, Issue 2
  • DOI: 10.1093/glycob/cwj016

    Works referencing / citing this record:

    PdWND3A, a wood-associated NAC domain-containing protein, affects lignin biosynthesis and composition in Populus
    journal, November 2019


    Agronomic performance of Populus deltoides trees engineered for biofuel production
    journal, November 2017

    • Macaya-Sanz, David; Chen, Jin‐Gui; Kalluri, Udaya C.
    • Biotechnology for Biofuels, Vol. 10, Issue 1
    • DOI: 10.1186/s13068-017-0934-6