Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug

Meyers, Desiree J.; Leigh, Brittany A.; Huntemann, Marcel; Clum, Alicia; Ritter, Stephan; Palaniappan, Krishnaveni; Chen, I-Min; Stamatis, Dimitrios; Reddy, T. B. K.; O’Malley, Ronan; Daum, Chris; Shapiro, Nicole; Ivanova, Natalia; Kyrpides, Nikos C.; Woyke, Tanja; Whitman, William B.; Newton, ed., Irene L. G.

doi:10.1128/MRA.00104-20

Title: Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug

Abstract

We report here the draft genome sequence of Yokenella regensburgei strain WCD67, isolated from the boxelder bug ( Boisea trivittata ). The genome is 5,277,883 bp in size, has a GC content of 54.12%, and has 5,416 genes. A total of 17 mobile elements were discovered, 6 of which were predicted to be phages.

Authors:

Meyers, Desiree J. ^[1]; Leigh, Brittany A. ^[2]; Huntemann, Marcel ^[3]; Clum, Alicia ^[3]; Ritter, Stephan ^[3]; Palaniappan, Krishnaveni ^[3]; Chen, I-Min ^[3]; Stamatis, Dimitrios ^[3];

^[3]; O’Malley, Ronan ^[3]; Daum, Chris ^[3]; Shapiro, Nicole ^[3]; Ivanova, Natalia ^[3]; Kyrpides, Nikos C. ^[3];

^[3]; Whitman, William B. ^[4]; Newton, ed., Irene L. G.

Department of Biology, Wayne County Community College District, Detroit, Michigan, USA
Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, USA
Joint Genome Institute, U.S. Department of Energy, Berkeley, California, USA
University of Georgia, Department of Microbiology, Athens, Georgia, USA

Publication Date:: 2020-04-09

Sponsoring Org.:: USDOE

OSTI Identifier:: 1608741

Grant/Contract Number:: AC02-05CH11231

Resource Type:: Published Article

Journal Name:: Microbiology Resource Announcements

Additional Journal Information:: Journal Name: Microbiology Resource Announcements Journal Volume: 9 Journal Issue: 15; Journal ID: ISSN 2576-098X

Publisher:: American Society for Microbiology

Country of Publication:: United States

Language:: English

Citation Formats


                    Meyers, Desiree J., Leigh, Brittany A., Huntemann, Marcel, Clum, Alicia, Ritter, Stephan, Palaniappan, Krishnaveni, Chen, I-Min, Stamatis, Dimitrios, Reddy, T. B. K., O’Malley, Ronan, Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos C., Woyke, Tanja, Whitman, William B., and Newton, ed., Irene L. G. Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug.  United States: N. p., 2020. 
Web.  doi:10.1128/MRA.00104-20.

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                    Meyers, Desiree J., Leigh, Brittany A., Huntemann, Marcel, Clum, Alicia, Ritter, Stephan, Palaniappan, Krishnaveni, Chen, I-Min, Stamatis, Dimitrios, Reddy, T. B. K., O’Malley, Ronan, Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos C., Woyke, Tanja, Whitman, William B., & Newton, ed., Irene L. G. Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug.  United States.  https://doi.org/10.1128/MRA.00104-20

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                    Meyers, Desiree J., Leigh, Brittany A., Huntemann, Marcel, Clum, Alicia, Ritter, Stephan, Palaniappan, Krishnaveni, Chen, I-Min, Stamatis, Dimitrios, Reddy, T. B. K., O’Malley, Ronan, Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos C., Woyke, Tanja, Whitman, William B., and Newton, ed., Irene L. G. Thu .  
"Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug".  United States.  https://doi.org/10.1128/MRA.00104-20.

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@article{osti_1608741,

  title        = {Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug},

  author       = {Meyers, Desiree J. and Leigh, Brittany A. and Huntemann, Marcel and Clum, Alicia and Ritter, Stephan and Palaniappan, Krishnaveni and Chen, I-Min and Stamatis, Dimitrios and Reddy, T. B. K. and O’Malley, Ronan and Daum, Chris and Shapiro, Nicole and Ivanova, Natalia and Kyrpides, Nikos C. and Woyke, Tanja and Whitman, William B. and Newton, ed., Irene L. G.},

  abstractNote = {We report here the draft genome sequence of Yokenella regensburgei strain WCD67, isolated from the boxelder bug ( Boisea trivittata ). The genome is 5,277,883 bp in size, has a GC content of 54.12%, and has 5,416 genes. A total of 17 mobile elements were discovered, 6 of which were predicted to be phages.},

  doi          = {10.1128/MRA.00104-20},

  journal      = {Microbiology Resource Announcements},

  number       = 15,

  volume       = 9,

  place        = {United States},

  year         = {2020},

  month        = {4}

}

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Works referenced in this record:

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Kosako, Yoshimasa; Sakazaki, Riichi; Yoshizaki, Etsuro
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Characterized non-transient microbiota from stinkbug (Nezara viridula) midgut deactivates soybean chemical defenses
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Culturable symbionts associated with the reproductive and digestive tissues of the Neotropical brown stinkbug Euschistus heros
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Scopel, Wanessa; Cônsoli, Fernando Luis
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Chen, I-Min A.; Chu, Ken; Palaniappan, Krishna
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VirSorter: mining viral signal from microbial genomic data
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PeerJ, Vol. 3
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Similar Records

Title: Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug

Abstract

Citation Formats

Yokenella Regensburgei gen. Nov., sp. Nov.: a new Genus and Species in the Family Enterobacteriaceae journal, January 1984

Cultivation and characterization of symbiotic bacteria from the gut of Reticulitermes chinensis journal, January 2016

The gut microbiota of insects – diversity in structure and function journal, September 2013

Characterized non-transient microbiota from stinkbug (Nezara viridula) midgut deactivates soybean chemical defenses journal, July 2018

Potential applications of insect symbionts in biotechnology journal, December 2015

Review of the Gross Anatomy and Microbiology of the Phasmatodea Digestive Tract journal, July 2015

Diversity and Persistence of the Gut Microbiome of the Giant Neotropical Bullet Ant journal, June 2017

Culturable symbionts associated with the reproductive and digestive tissues of the Neotropical brown stinkbug Euschistus heros journal, July 2018

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing journal, May 2012

IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes journal, October 2018

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Yokenella Regensburgei gen. Nov., sp. Nov.: a new Genus and Species in the Family Enterobacteriaceae
journal, January 1984

Cultivation and characterization of symbiotic bacteria from the gut of Reticulitermes chinensis
journal, January 2016

The gut microbiota of insects – diversity in structure and function
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journal, July 2018

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journal, December 2015

Review of the Gross Anatomy and Microbiology of the Phasmatodea Digestive Tract
journal, July 2015

Diversity and Persistence of the Gut Microbiome of the Giant Neotropical Bullet Ant
journal, June 2017

Culturable symbionts associated with the reproductive and digestive tissues of the Neotropical brown stinkbug Euschistus heros
journal, July 2018

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
journal, May 2012

IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
journal, October 2018

VirSorter: mining viral signal from microbial genomic data
journal, January 2015