Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere
Abstract
Terriglobus albidus strain ORNL is a heterotrophic soil acidobacterium isolated from the rhizosphere of an Eastern cottonwood tree (Populus deltoides) in Tennessee. Its 6.4-Mb chromosome was completely sequenced using PacBio long reads, and it encodes 5,010 proteins and 53 RNAs.
- Authors:
-
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Publication Date:
- Research Org.:
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1606969
- Grant/Contract Number:
- AC05-00OR22725
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Microbiology Resource Announcements
- Additional Journal Information:
- Journal Volume: 8; Journal Issue: 46; Journal ID: ISSN 2576-098X
- Publisher:
- SSPA - American Society for Microbiology
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES
Citation Formats
Podar, Mircea, Turner, Joel, Burdick, Leah H., and Pelletier, Dale. Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere. United States: N. p., 2019.
Web. doi:10.1128/MRA.01065-19.
Podar, Mircea, Turner, Joel, Burdick, Leah H., & Pelletier, Dale. Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere. United States. https://doi.org/10.1128/MRA.01065-19
Podar, Mircea, Turner, Joel, Burdick, Leah H., and Pelletier, Dale. Thu .
"Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere". United States. https://doi.org/10.1128/MRA.01065-19. https://www.osti.gov/servlets/purl/1606969.
@article{osti_1606969,
title = {Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere},
author = {Podar, Mircea and Turner, Joel and Burdick, Leah H. and Pelletier, Dale},
abstractNote = {Terriglobus albidus strain ORNL is a heterotrophic soil acidobacterium isolated from the rhizosphere of an Eastern cottonwood tree (Populus deltoides) in Tennessee. Its 6.4-Mb chromosome was completely sequenced using PacBio long reads, and it encodes 5,010 proteins and 53 RNAs.},
doi = {10.1128/MRA.01065-19},
journal = {Microbiology Resource Announcements},
number = 46,
volume = 8,
place = {United States},
year = {2019},
month = {11}
}
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Works referenced in this record:
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
journal, August 2018
- Parks, Donovan H.; Chuvochina, Maria; Waite, David W.
- Nature Biotechnology, Vol. 36, Issue 10
KBase: The United States Department of Energy Systems Biology Knowledgebase
journal, July 2018
- Arkin, Adam P.; Cottingham, Robert W.; Henry, Christopher S.
- Nature Biotechnology, Vol. 36, Issue 7
The Ecology of Acidobacteria: Moving beyond Genes and Genomes
journal, May 2016
- Kielak, Anna M.; Barreto, Cristine C.; Kowalchuk, George A.
- Frontiers in Microbiology, Vol. 7
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
journal, April 2012
- Kearse, M.; Moir, R.; Wilson, A.
- Bioinformatics, Vol. 28, Issue 12
Identifying the Dominant Soil Bacterial Taxa in Libraries of 16S rRNA and 16S rRNA Genes
journal, March 2006
- Janssen, P. H.
- Applied and Environmental Microbiology, Vol. 72, Issue 3
Terriglobus albidus sp. nov., a member of the family Acidobacteriaceae isolated from Namibian semiarid savannah soil
journal, October 2015
- Huber, Katharina J.; Overmann, Jörg; Pascual, Javier
- International Journal of Systematic and Evolutionary Microbiology, Vol. 65, Issue 10
Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis
journal, July 2016
- Utturkar, Sagar M.; Cude, W. Nathan; Robeson, Michael S.
- Applied and Environmental Microbiology, Vol. 82, Issue 18
NCBI prokaryotic genome annotation pipeline
journal, June 2016
- Tatusova, Tatiana; DiCuccio, Michael; Badretdin, Azat
- Nucleic Acids Research, Vol. 44, Issue 14
IND-enzymes: a repository for hydrolytic enzymes derived from thermophilic and psychrophilic bacterial species with potential industrial usage
journal, May 2021
- Sunny, Jithin S.; Nisha, Khairun; Natarajan, Anuradha
- Extremophiles, Vol. 25, Issue 4
Evolutionary stasis of a deep subsurface microbial lineage
journal, April 2021
- Becraft, Eric D.; Lau Vetter, Maggie C. Y.; Bezuidt, Oliver K. I.
- The ISME Journal
Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysis
journal, September 2020
- Vu, Nga T. T.; Zenger, Kyall R.; Guppy, Jarrod L.
- BMC Genomics, Vol. 21, Issue 1
Works referencing / citing this record:
Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere
dataset, January 2020
- Podar, Mircea; Crockett, Zachary
- Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States); U.S. Department of Energy Systems Biology Knowledgebase