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Title: Genomes and Secretomes of Ascomycota Fungi Reveal Diverse Functions in Plant Biomass Decomposition and Pathogenesis

ORCiD logo [1];  [2]; ORCiD logo [1];  [3];  [3];  [1];  [4]; ORCiD logo [1]
  1. Los Alamos National Laboratory
  2. Horticultural Crops Research, USDA ARS, Corvallis, Oregon, USA
  3. Pacific Northwest National Laboratory, Richland, Washington, USA
  4. Department of Biology, Western Illinois University, Macomb, Illinois, USA
Publication Date:
Research Org.:
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Sponsoring Org.:
USDOE Office of Science (SC). Biological and Environmental Research (BER) (SC-23)
OSTI Identifier:
Report Number(s):
[Journal ID: 1471-2164 (Electronic)]
Grant/Contract Number:  
Resource Type:
Accepted Manuscript
Journal Name:
BMC Genomics
Additional Journal Information:
[ Journal Volume: 20; Journal Issue: 1]
Country of Publication:
United States
Biological Science

Citation Formats

Challacombe, Jean Faust, Hesse, Cedar N, Xie, Gang, Bramer, Lisa M, McCue, Lee Ann, Gallegos-Graves, Laverne A., Porras-Alfaro, A, and Kuske, Cheryl Rae. Genomes and Secretomes of Ascomycota Fungi Reveal Diverse Functions in Plant Biomass Decomposition and Pathogenesis. United States: N. p., 2019. Web. doi:10.1186/s12864-019-6358-x.
Challacombe, Jean Faust, Hesse, Cedar N, Xie, Gang, Bramer, Lisa M, McCue, Lee Ann, Gallegos-Graves, Laverne A., Porras-Alfaro, A, & Kuske, Cheryl Rae. Genomes and Secretomes of Ascomycota Fungi Reveal Diverse Functions in Plant Biomass Decomposition and Pathogenesis. United States. doi:10.1186/s12864-019-6358-x.
Challacombe, Jean Faust, Hesse, Cedar N, Xie, Gang, Bramer, Lisa M, McCue, Lee Ann, Gallegos-Graves, Laverne A., Porras-Alfaro, A, and Kuske, Cheryl Rae. Thu . "Genomes and Secretomes of Ascomycota Fungi Reveal Diverse Functions in Plant Biomass Decomposition and Pathogenesis". United States. doi:10.1186/s12864-019-6358-x.
title = {Genomes and Secretomes of Ascomycota Fungi Reveal Diverse Functions in Plant Biomass Decomposition and Pathogenesis},
author = {Challacombe, Jean Faust and Hesse, Cedar N and Xie, Gang and Bramer, Lisa M and McCue, Lee Ann and Gallegos-Graves, Laverne A. and Porras-Alfaro, A and Kuske, Cheryl Rae},
abstractNote = {},
doi = {10.1186/s12864-019-6358-x},
journal = {BMC Genomics},
number = [1],
volume = [20],
place = {United States},
year = {2019},
month = {12}

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dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
journal, May 2018

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SPOCS: software for predicting and visualizing orthology/paralogy relationships among genomes
journal, August 2013

Universal sample preparation method for proteome analysis
journal, April 2009

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DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra
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MS-GF+ makes progress towards a universal database search tool for proteomics
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annot8r: GO, EC and KEGG annotation of EST datasets
journal, April 2008

KEGG: new perspectives on genomes, pathways, diseases and drugs
journal, November 2016

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Improved Prediction of Signal Peptides: SignalP 3.0
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Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
journal, January 2001

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