Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities
Abstract
Antarctic cryptoendolithic communities are microbial ecosystems dwelling inside rocks of the Antarctic desert. We present the first 18 shotgun metagenomes from these communities to further characterize their composition, biodiversity, functionality, and adaptation. Future studies will integrate taxonomic and functional annotations to examine the pathways necessary for life to evolve in the extremes.
- Authors:
-
[1];
[4];
- Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy
- Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’Adige, Italy
- Department of Energy Joint Genome Institute, Walnut Creek, California, USA
- Department of Microbiology and Plant Pathology, University of California, Riverside, Riverside, California, USA, Institute of Integrative Genome Biology, University of California, Riverside, Riverside, California, USA
- Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy, Mycological Section, Italian Antarctic National Museum, Genoa, Italy
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; Italian Antarctic National Museum (MNA); Italian National Program for Antarctic Researches (PNRA); National Science Foundation (NSF); National Institutes of Health (NIH)
- OSTI Identifier:
- 1602888
- Alternate Identifier(s):
- OSTI ID: 1609118
- Grant/Contract Number:
- AC02-05CH11231; DBI-1429826; S10-OD016290
- Resource Type:
- Published Article
- Journal Name:
- Microbiology Resource Announcements
- Additional Journal Information:
- Journal Name: Microbiology Resource Announcements Journal Volume: 9 Journal Issue: 10; Journal ID: ISSN 2576-098X
- Publisher:
- SSPA - American Society for Microbiology
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES
Citation Formats
Coleine, Claudia, Albanese, Davide, Onofri, Silvano, Tringe, Susannah G., Pennacchio, Christa, Donati, Claudio, Stajich, Jason E., Selbmann, Laura, and Cuomo, ed., Christina A. Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities. United States: N. p., 2020.
Web. doi:10.1128/MRA.01599-19.
Coleine, Claudia, Albanese, Davide, Onofri, Silvano, Tringe, Susannah G., Pennacchio, Christa, Donati, Claudio, Stajich, Jason E., Selbmann, Laura, & Cuomo, ed., Christina A. Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities. United States. https://doi.org/10.1128/MRA.01599-19
Coleine, Claudia, Albanese, Davide, Onofri, Silvano, Tringe, Susannah G., Pennacchio, Christa, Donati, Claudio, Stajich, Jason E., Selbmann, Laura, and Cuomo, ed., Christina A. Thu .
"Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities". United States. https://doi.org/10.1128/MRA.01599-19.
@article{osti_1602888,
title = {Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities},
author = {Coleine, Claudia and Albanese, Davide and Onofri, Silvano and Tringe, Susannah G. and Pennacchio, Christa and Donati, Claudio and Stajich, Jason E. and Selbmann, Laura and Cuomo, ed., Christina A.},
abstractNote = {Antarctic cryptoendolithic communities are microbial ecosystems dwelling inside rocks of the Antarctic desert. We present the first 18 shotgun metagenomes from these communities to further characterize their composition, biodiversity, functionality, and adaptation. Future studies will integrate taxonomic and functional annotations to examine the pathways necessary for life to evolve in the extremes.},
doi = {10.1128/MRA.01599-19},
journal = {Microbiology Resource Announcements},
number = 10,
volume = 9,
place = {United States},
year = {2020},
month = {3}
}
Free Publicly Available Full Text
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https://doi.org/10.1128/MRA.01599-19
https://doi.org/10.1128/MRA.01599-19
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TABLE 1 : Accession numbers and data for the metagenomes in this study
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Works referenced in this record:
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journal, June 2018
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Figures/Tables have been extracted from DOE-funded journal article accepted manuscripts.