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Title: Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea

Journal Article · · Microbiology Resource Announcements
ORCiD logo [1];  [2];  [2];  [3];  [4];  [5];  [5];  [6];  [2];  [2];  [2];  [2];  [3];  [7];  [7];  [3];  [3];  [8]; ORCiD logo [1];  [9]
  1. Michigan State Univ., East Lansing, MI (United States); Great Lakes Bioenergy Research Center (GLBRC), East Lansing, MI (United States)
  2. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  3. Univ. of Perugia (Italy)
  4. Austrian Inst. of Technology (AIT), Tulln (Austria)
  5. Centro de Investigación y Tecnología Agroalimentaria de Aragón (CITA), Zaragoza (Spain)
  6. Michigan State Univ., East Lansing, MI (United States)
  7. Univ. de Lorraine, Champenoux (France)
  8. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); Univ. of California, Berkeley, CA (United States)
  9. Vanderbilt Univ., Nashville, TN (United States)
+ Show Author Affiliations

Sphaerosporella brunneais a pioneer ectomycorrhizal fungus with facultative saprophytic capacities. Here, we sequenced the genome ofS. brunneastrain Sb_GMNB300, which is estimated at 51.6 Mb in size with 872 assembled contigs accounting for 12,597 predicted coding genes. This genome will be useful for comparative studies of Pezizales ectomycorrhizal symbioses.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
Spanish National Institute of Agricultural Research; USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
Grant/Contract Number:
AC02-05CH11231; SC0018409
OSTI ID:
1599825
Journal Information:
Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 50 Vol. 8; ISSN 2576-098X
Publisher:
SSPA - American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (16)

Fungal Genomics book May 2014
Experiments on the life cycle and factors affecting reproduction of Sphaerosporella brunnea provide evidence for rapid asexual propagation by conidiospores and for homothallism in an ectomycorrhizal competitor of cultivated truffle species journal April 2014
Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis journal March 2010
Full-length transcriptome assembly from RNA-Seq data without a reference genome journal May 2011
Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists journal February 2015
Phased diploid genome assembly with single-molecule real-time sequencing journal October 2016
Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle journal November 2018
Ectomycorrhiza Formation by the Operculate Discomycete Sphaerosporella Brunnea ( Pezizales ) journal May 1984
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes journal March 2007
FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads journal June 2015
An efficient algorithm for large-scale detection of protein families journal April 2002
MycoCosm portal: gearing up for 1000 fungal genomes journal December 2013
Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle journal June 2018
The Genome and Development-Dependent Transcriptomes of Pyronema confluens: A Window into Fungal Evolution journal September 2013
Genome-scale model reconstruction of the methylotrophic yeast Ogataea polymorpha text January 2021
Ectomycorrhiza Formation by the Operculate Discomycete Sphaerosporella brunnea (Pezizales) journal May 1984

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59 BASIC BIOLOGICAL SCIENCES
Dichobotrys
PacBio
Sphaerosporella
Tuber
ascomycota
ectomycorrhiza
pezizales