DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Metabolic engineering of Zymomonas mobilis for anaerobic isobutanol production

Journal Article · · Biotechnology for Biofuels
 [1];  [1];  [1];  [1];  [1];  [1]; ORCiD logo [2]; ORCiD logo [2];  [2];  [2];  [1]
  1. Hubei Univ., Wuhan (China). State Key Lab. of Biocatalysis and Enzyme Engineering, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences
  2. National Renewable Energy Laboratory (NREL), Golden, CO (United States)

Biofuels and value-added biochemicals derived from renewable biomass via biochemical conversion have attracted considerable attention to meet global sustainable energy and environmental goals. Isobutanol is a four-carbon alcohol with many advantages that make it attractive as a fossil-fuel alternative. Zymomonas mobilis is a highly efficient, anaerobic, ethanologenic bacterium making it a promising industrial platform for use in a biorefinery. In this study, the effect of isobutanol on Z. mobilis was investigated, and various isobutanol-producing recombinant strains were constructed. The results showed that the Z. mobilis parental strain was able to grow in the presence of isobutanol below 12 g/L while concentrations greater than 16 g/L inhibited cell growth. Integration of the heterologous gene encoding 2-ketoisovalerate decarboxylase such as kdcA from Lactococcus lactis is required for isobutanol production in Z. mobilis. Moreover, isobutanol production increased from nearly zero to 100-150 mg/L in recombinant strains containing the kdcA gene driven by the tetracycline-inducible promoter Ptet. In addition, we determined that overexpression of a heterologous als gene and two native genes (ilvC and ilvD) involved in valine metabolism in a recombinant Z. mobilis strain expressing kdcA can divert pyruvate from ethanol production to isobutanol biosynthesis. This engineering improved isobutanol production to above 1 g/L. Finally, recombinant strains containing both a synthetic operon, als-ilvC-ilvD, driven by Ptet and the kdcA gene driven by the constitutive strong promoter, Pgap, were determined to greatly enhance isobutanol production with a maximum titer about 4.0 g/L. Finally, isobutanol production was negatively affected by aeration with more isobutanol being produced in more poorly aerated flasks. This study demonstrated that overexpression of kdcA in combination with a synthetic heterologous operon, als-ilvC-ilvD, is crucial for diverting pyruvate from ethanol production for enhanced isobutanol biosynthesis. Moreover, this study also provides a strategy for harnessing the valine metabolic pathway for future production of other pyruvate-derived biochemicals in Z. mobilis.

Research Organization:
National Renewable Energy Laboratory (NREL), Golden, CO (United States)
Sponsoring Organization:
USDOE Office of Energy Efficiency and Renewable Energy (EERE), Sustainable Transportation Office. Bioenergy Technologies Office (BETO)
Grant/Contract Number:
AC36-08GO28308
OSTI ID:
1599571
Report Number(s):
NREL/JA-2700-74750
Journal Information:
Biotechnology for Biofuels, Vol. 13, Issue 1; ISSN 1754-6834
Publisher:
BioMed CentralCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 40 works
Citation information provided by
Web of Science

References (56)

High-flux isobutanol production using engineered Escherichia coli: a bioreactor study with in situ product removal journal March 2011
Advanced biofuel production by the yeast Saccharomyces cerevisiae journal June 2013
Adaptive laboratory evolution of ethanologenic Zymomonas mobilis strain tolerant to furfural and acetic acid inhibitors journal May 2015
Protein engineering of α-ketoisovalerate decarboxylase for improved isobutanol production in Synechocystis PCC 6803 journal May 2018
Characterization and repurposing of the endogenous Type I-F CRISPR–Cas system of Zymomonas mobilis for genome engineering journal October 2019
Engineering Zymomonas mobilis for Robust Cellulosic Ethanol Production journal September 2019
Improving isobutanol production in metabolically engineered Escherichia coli by co-producing ethanol and modulation of pentose phosphate pathway journal March 2016
Improved genome annotation for Zymomonas mobilis journal October 2009
Engineering the isobutanol biosynthetic pathway in Escherichia coli by comparison of three aldehyde reductase/alcohol dehydrogenase genes journal July 2009
Isobutanol production in Synechocystis PCC 6803 using heterologous and endogenous alcohol dehydrogenases journal December 2017
Transcriptomic and metabolomic profiling of Zymomonas mobilis during aerobic and anaerobic fermentations journal January 2009
Zymomonas mobilis: a novel platform for future biorefineries journal January 2014
Use of a Tn5-based transposon system to create a cost-effective Zymomonas mobilis for ethanol production from lignocelluloses journal January 2013
Improving isobutanol production with the yeast Saccharomyces cerevisiae by successively blocking competing metabolic pathways as well as ethanol and glycerol formation journal July 2019
Heterologous expression of bacterial phosphoenol pyruvate carboxylase and Entner–Doudoroff pathway in Saccharomyces cerevisiae for improvement of isobutanol production journal September 2017
Genetic engineering to enhance the Ehrlich pathway and alter carbon flux for increased isobutanol production from glucose by Saccharomyces cerevisiae journal May 2012
Engineering Corynebacterium glutamicum for isobutanol production journal April 2010
Reconstruction of metabolic pathway for isobutanol production in Escherichia coli journal July 2019
Frontiers in microbial 1-butanol and isobutanol production journal January 2016
Metabolic engineering of microbial pathways for advanced biofuels production journal December 2011
Microbial engineering for the production of advanced biofuels journal August 2012
OptSSeq explores enzyme expression and function landscapes to maximize isobutanol production rate journal March 2019
Prediction and characterization of promoters and ribosomal binding sites of Zymomonas mobilis in system biology era journal March 2019
Molecular characterization of Legionella pneumophila-induced interleukin-8 expression in T cells journal January 2010
DNA restriction-modification systems in the ethanologen, Zymomonas mobilis ZM4 journal October 2010
Engineering Bacillus subtilis for isobutanol production by heterologous Ehrlich pathway construction and the biosynthetic 2-ketoisovalerate precursor pathway overexpression journal April 2011
Zymomonas mobilis as a model system for production of biofuels and biochemicals journal September 2016
Activating transhydrogenase and NAD kinase in combination for improving isobutanol production journal March 2013
Identification and characterization of ethanol‐inducible promoters of Zymomonas mobilis based on omics data and dual reporter–gene system journal December 2019
Systems Biology Analysis of Zymomonas mobilis ZM4 Ethanol Stress Responses journal July 2013
Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels journal January 2008
Corynebacterium glutamicum Tailored for Efficient Isobutanol Production journal March 2011
Metabolic engineering of Zymomonas mobilis for 2,3-butanediol production from lignocellulosic biomass sugars journal September 2016
Metabolic Engineering of a Pentose Metabolism Pathway in Ethanologenic Zymomonas mobilis journal January 1995
Biotechnological potential of respiring Zymomonas mobilis: A stoichiometric analysis of its central metabolism journal May 2013
Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032 journal May 2018
Metabolic engineering of microorganisms for biofuels production: from bugs to synthetic biology to fuels journal December 2008
ARTP mutation and genome shuffling of ABE fermentation symbiotic system for improvement of butanol production journal January 2017
Biosynthesis, regulation, and engineering of microbially produced branched biofuels journal April 2019
Butanol Tolerance in a Selection of Microorganisms journal December 2008
Draft Genome Sequence of the Flocculating Zymomonas mobilis Strain ZM401 (ATCC 31822) journal December 2012
Zymomonas mobilis: an alternative ethanol producer journal January 2006
Metabolic engineering of Pichia pastoris for production of isobutanol and isobutyl acetate journal January 2018
The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4 journal December 2004
Redesigning Escherichia coli Metabolism for Anaerobic Production of Isobutanol journal June 2011
Establishment and application of a CRISPR–Cas12a assisted genome-editing system in Zymomonas mobilis journal October 2019
Direct photosynthetic recycling of carbon dioxide to isobutyraldehyde journal November 2009
Genome-scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis journal November 2010
Subunit structure, function and organisation of pyruvate decarboxylases from various organisms journal June 1998
Transcriptome profiling of Zymomonas mobilis under ethanol stress journal January 2012
Isobutanol production at elevated temperatures in thermophilic Geobacillus thermoglucosidasius journal July 2014
Progress and perspective on lignocellulosic hydrolysate inhibitor tolerance improvement in Zymomonas mobilis journal February 2018
Increased isobutanol production in Saccharomyces cerevisiae by overexpression of genes in valine metabolism journal January 2011
Enhancement of photosynthetic isobutanol production in engineered cells of Synechocystis PCC 6803 journal September 2018
Use of an EZ-Tn5-based random mutagenesis system to create a Zymomonas mobilis with significant tolerance to heat stress and malnutrition journal May 2013
Metabolic Engineering of Synechocystis sp. Strain PCC 6803 for Isobutanol Production journal November 2012