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Title: Vampirovibrio chlorellavorus draft genome sequence, annotation, and preliminary characterization of pathogenicity determinants

Journal Article · · Phycological Research
DOI: https://doi.org/10.1111/pre.12392 · OSTI ID:1592174
ORCiD logo [1];  [2];  [1];  [2]
  1. Bioscience Division, Los Alamos National Laboratory Los Alamos New Mexico USA
  2. School of Plant SciencesThe University of Arizona Tucson Arizona USA

Not Available

Sponsoring Organization:
USDOE Office of Energy Efficiency and Renewable Energy (EERE)
Grant/Contract Number:
89233218CNA000001; EE0006269
OSTI ID:
1592174
Journal Information:
Phycological Research, Journal Name: Phycological Research Journal Issue: 1 Vol. 68; ISSN 1322-0829
Publisher:
WileyCopyright Statement
Country of Publication:
Australia
Language:
English

References (23)

Antagonistic association of the chlorellavorus bacterium (“Bdellovibrio” chlorellavorus) withChlorella vulgaris journal January 1978
A large-scale evaluation of algorithms to calculate average nucleotide identity journal February 2017
Association of Vampirovibrio chlorellavorus with decline and death of Chlorella sorokiniana in outdoor reactors journal October 2018
Real-time quantitative detection of Vampirovibrio chlorellavorus, an obligate bacterial pathogen of Chlorella sorokiniana journal October 2018
The ABC of ABCs: a phylogenetic and functional classification of ABC systems in living organisms journal April 2001
ABC transporter-mediated uptake of iron, siderophores, heme and vitamin B12 journal April 2001
A validated model to predict microalgae growth in outdoor pond cultures subjected to fluctuating light intensities and water temperatures journal January 2016
A novel predatory bacterium infecting the eukaryotic alga Nannochloropsis journal June 2018
A Greedy Algorithm for Aligning DNA Sequences journal February 2000
QGB: Combined Use of Sequence Similarity and Codon Bias for Coding Region Identification journal January 1994
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth journal April 2012
Prokka: rapid prokaryotic genome annotation journal March 2014
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs journal June 2015
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper journal April 2017
Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform journal November 2016
UniProt: the universal protein knowledgebase journal November 2016
CDD/SPARCLE: functional classification of proteins via subfamily domain architectures journal November 2016
Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements journal June 2004
The host Range of the Chlorellavorous Bacterium ("Vampirovibrio Chlorellvorus") journal December 1986
VirB1* Promotes T-Pilus Formation in the vir-Type IV Secretion System of Agrobacterium tumefaciens journal July 2007
The Mosaic Type IV Secretion Systems journal January 2016
ATP-Binding Cassette Transporters in Bacteria journal June 2004
Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus journal January 2015