Draft Genome Sequence of Mn(II)-Oxidizing Bacterium Oxalobacteraceae sp. Strain AB_14

Bushman, Timothy J.; Akob, Denise M.; Bohu, Tsing; Beyer, Andrea; Woyke, Tanja; Shapiro, Nicole; Lapidus, Alla; Klenk, Hans-Peter; Küsel, Kirsten

doi:10.1128/MRA.01024-19

Title: Draft Genome Sequence of Mn(II)-Oxidizing Bacterium Oxalobacteraceae sp. Strain AB_14

Journal Article · 24 October 2019 · Microbiology Resource Announcements

DOI: https://doi.org/10.1128/MRA.01024-19 · OSTI ID:1580956

^[1];

^[1]; Bohu, Tsing ^[2]; Beyer, Andrea ^[3]; Woyke, Tanja ^[4]; Shapiro, Nicole ^[4]; Lapidus, Alla ^[5];

^[6]; Küsel, Kirsten ^[7]

U.S. Geological Survey, Reston, VA (United States)
Commonwealth Scientific and Industrial Research Organization (CSIRO), Kensington, WA (Australia)
Friedrich Schiller Univ., Jena (Germany). Inst. for Microbiology
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); St. Petersburg State Univ., St. Petersburg (Russia)
Newcastle Univ., Newcastle upon Tyne (United Kingdom)
Friedrich Schiller Univ., Jena (Germany). Inst. of Biodiversity

Biological Mn(II) oxidation produces reactive manganese oxides that help to mitigate metal contamination in the environment. Here, we present the genome ofOxalobacteraceae sp. strain AB_14, a species of Mn(II)-oxidizing bacteria (MOB) that is notable for its ability to catalyze Mn oxidation at low pH (5.5).

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC); Russian Science Foundation

Grant/Contract Number:: AC02-05CH11231; 19-16-00049

OSTI ID:: 1580956

Journal Information:: Microbiology Resource Announcements, Vol. 8, Issue 43; ISSN 2576-098X

Publisher:: SSPA - American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (8)

Geomicrobiology of manganese(II) oxidation Tebo, Bradley M.; Johnson, Hope A.; McCarthy, James K. Trends in Microbiology, Vol. 13, Issue 9 https://doi.org/10.1016/j.tim.2005.07.009	journal	September 2005
Identification of Mn(II)-Oxidizing Bacteria from a Low-pH Contaminated Former Uranium Mine Akob, Denise M.; Bohu, Tsing; Beyer, Andrea Applied and Environmental Microbiology, Vol. 80, Issue 16 https://doi.org/10.1128/AEM.01296-14	journal	June 2014
Biological Low-pH Mn(II) Oxidation in a Manganese Deposit Influenced by Metal-Rich Groundwater Bohu, Tsing; Akob, Denise M.; Abratis, Michael Applied and Environmental Microbiology, Vol. 82, Issue 10 https://doi.org/10.1128/AEM.03844-15	journal	March 2016
Investigations on theSphaerotilus-Leptothrix group Mulder, E. G.; van Veen, W. L. Antonie van Leeuwenhoek, Vol. 29, Issue 1 https://doi.org/10.1007/BF02046045	journal	December 1963
Real-Time DNA Sequencing from Single Polymerase Molecules Eid, John; Fehr, Adrian; Gray, Jeremy Science, Vol. 323, Issue 5910, p. 133-138 https://doi.org/10.1126/science.1162986	journal	January 2009
High-quality draft assemblies of mammalian genomes from massively parallel sequence data Gnerre, S.; MacCallum, I.; Przybylski, D. Proceedings of the National Academy of Sciences, Vol. 108, Issue 4 https://doi.org/10.1073/pnas.1017351108	journal	December 2010
IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes Chen, I-Min A.; Chu, Ken; Palaniappan, Krishna Nucleic Acids Research, Vol. 47, Issue D1 https://doi.org/10.1093/nar/gky901	journal	October 2018
GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes Pati, Amrita; Ivanova, Natalia N.; Mikhailova, Natalia Nature Methods, Vol. 7, Issue 6 https://doi.org/10.1038/nmeth.1457	journal	May 2010

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