Lipid-anchor display on peptoid nanosheets via co-assembly for multivalent pathogen recognition

Kim, Jae Hong; Grzincic, Elissa M.; Yun, Lisa; Spencer, Ryan K.; Kline, Mark A.; Zuckermann, Ronald N.

doi:10.1039/C9SM01908A

Title: Lipid-anchor display on peptoid nanosheets via co-assembly for multivalent pathogen recognition

Abstract

A facile route to a diversity of functionalized two-dimensional bionanomaterials was developed based on the aqueous co-assembly of lipidated small molecules and nanosheet-forming peptoids.

Authors:

Kim, Jae Hong ^[1]; Grzincic, Elissa M. ^[1];

^[1];

^[2]; Kline, Mark A. ^[1];

^[1]

Molecular Foundry, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, USA
Department of Chemistry and Department of Chemical Engineering & Materials Science, University of California, Irvine, Irvine, USA

Publication Date:: 2020-01-29

Sponsoring Org.:: USDOE

OSTI Identifier:: 1579975

Grant/Contract Number:: DEAC02-05CH11231

Resource Type:: Publisher's Accepted Manuscript

Journal Name:: Soft Matter

Additional Journal Information:: Journal Name: Soft Matter Journal Volume: 16 Journal Issue: 4; Journal ID: ISSN 1744-683X

Publisher:: Royal Society of Chemistry (RSC)

Country of Publication:: United Kingdom

Language:: English

Citation Formats


                    Kim, Jae Hong, Grzincic, Elissa M., Yun, Lisa, Spencer, Ryan K., Kline, Mark A., and Zuckermann, Ronald N. Lipid-anchor display on peptoid nanosheets via co-assembly for multivalent pathogen recognition.  United Kingdom: N. p., 2020. 
Web.  doi:10.1039/C9SM01908A.

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                    Kim, Jae Hong, Grzincic, Elissa M., Yun, Lisa, Spencer, Ryan K., Kline, Mark A., & Zuckermann, Ronald N. Lipid-anchor display on peptoid nanosheets via co-assembly for multivalent pathogen recognition.  United Kingdom.  https://doi.org/10.1039/C9SM01908A

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                    Kim, Jae Hong, Grzincic, Elissa M., Yun, Lisa, Spencer, Ryan K., Kline, Mark A., and Zuckermann, Ronald N. Wed .  
"Lipid-anchor display on peptoid nanosheets via co-assembly for multivalent pathogen recognition".  United Kingdom.  https://doi.org/10.1039/C9SM01908A.

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@article{osti_1579975,

  title        = {Lipid-anchor display on peptoid nanosheets via co-assembly for multivalent pathogen recognition},

  author       = {Kim, Jae Hong and Grzincic, Elissa M. and Yun, Lisa and Spencer, Ryan K. and Kline, Mark A. and Zuckermann, Ronald N.},

  abstractNote = {A facile route to a diversity of functionalized two-dimensional bionanomaterials was developed based on the aqueous co-assembly of lipidated small molecules and nanosheet-forming peptoids.},

  doi          = {10.1039/C9SM01908A},

  journal      = {Soft Matter},

  number       = 4,

  volume       = 16,

  place        = {United Kingdom},

  year         = {2020},

  month        = {1}

}

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Title: Lipid-anchor display on peptoid nanosheets via co-assembly for multivalent pathogen recognition

Abstract

Citation Formats

Free-floating ultrathin two-dimensional crystals from sequence-specific peptoid polymers journal, April 2010

Multivalent Nanofibers of a Controlled Length: Regulation of Bacterial Cell Agglutination journal, August 2012

Peptoid Polymers: A Highly Designable Bioinspired Material journal, May 2013

Peptoid Oligomers with α-Chiral, Aromatic Side Chains: Sequence Requirements for the Formation of Stable Peptoid Helices journal, July 2001

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Galactose Encapsulated Multifunctional Nanoparticle for HepG2 Cell Internalization journal, September 2010

Bacterial Adhesins: Common Themes and Variations in Architecture and Assembly journal, January 1999

Glycoconjugate Nanoribbons from the Self-Assembly of Carbohydrate−Peptide Block Molecules for Controllable Bacterial Cell Cluster Formation journal, May 2007

Glycosylated Peptoid Nanosheets as a Multivalent Scaffold for Protein Recognition journal, February 2018

Pathogen Inhibition by Multivalent Ligand Architectures journal, July 2016

Glycodendriproteins: A Synthetic Glycoprotein Mimic Enzyme with Branched Sugar-Display Potently Inhibits Bacterial Aggregation journal, April 2004

Lipid Rafts As a Membrane-Organizing Principle journal, December 2009

Small-molecule ligands strongly affect the Förster resonance energy transfer between a quantum dot and a fluorescent protein journal, January 2011

Iodide as a Fluorescence Quencher and Promoter—Mechanisms and Possible Implications journal, September 2010

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Implicit-Solvent Coarse-Grained Simulation with a Fluctuating Interface Reveals a Molecular Mechanism for Peptoid Monolayer Buckling journal, December 2015

Evaluating polymeric biomaterial–environment interfaces by Langmuir monolayer techniques journal, May 2017

Electronic Detection of Lectins Using Carbohydrate-Functionalized Nanostructures: Graphene versus Carbon Nanotubes journal, December 2011

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Multivalent Peptide and Protein Dendrimers Using Native Chemical Ligation journal, August 2005

Spatiotemporal control and superselectivity in supramolecular polymers using multivalency journal, July 2013

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Cyclic Peptoids journal, March 2007

Ligand-mediated Changes in the Tryptophan Synthase Indole Tunnel Probed by Nile Red Fluorescence with Wild Type, Mutant, and Chemically Modified Enzymes journal, March 1995

Structure and phase transitions in Langmuir monolayers journal, April 1999

Designing super selectivity in multivalent nano-particle binding journal, June 2011

Multivalency at Interfaces: Supramolecular Carbohydrate-Functionalized Graphene Derivatives for Bacterial Capture, Release, and Disinfection journal, August 2015

Sequence Programmable Peptoid Polymers for Diverse Materials Applications journal, April 2015

Molecular Engineering of the Peptoid Nanosheet Hydrophobic Core journal, October 2016

Glycosidase Inhibition with Fullerene Iminosugar Balls: A Dramatic Multivalent Effect journal, July 2010

Structure–Rheology Relationship in Nanosheet-Forming Peptoid Monolayers journal, October 2016

Peptoid nanosheets exhibit a new secondary-structure motif journal, October 2015

Interaction of the Shiga-like Toxin Type 1 B-Subunit with Its Carbohydrate Receptor journal, December 1994

Selective Binding of Mannose-Encapsulated Gold Nanoparticles to Type 1 Pili in Escherichia coli journal, April 2002

Antibody-Mimetic Peptoid Nanosheets for Molecular Recognition journal, September 2013

Structure-Determining Step in the Hierarchical Assembly of Peptoid Nanosheets journal, October 2014

Characterization of Escherichia coli Type 1 Pilus Mutants with Altered Binding Specificities journal, July 2001

A Sugar-Functionalized Amphiphilic Pillar[5]arene: Synthesis, Self-Assembly in Water, and Application in Bacterial Cell Agglutination journal, May 2013

A Peptoid Ribbon Secondary Structure journal, April 2013

Carbon Nanotube/Biocompatible Bola-Amphiphile Supramolecular Biohybrid Materials: Preparation and Their Application in Bacterial Cell Agglutination journal, September 2013

Free-floating ultrathin two-dimensional crystals from sequence-specific peptoid polymers
journal, April 2010

Multivalent Nanofibers of a Controlled Length: Regulation of Bacterial Cell Agglutination
journal, August 2012

Peptoid Polymers: A Highly Designable Bioinspired Material
journal, May 2013

Peptoid Oligomers with α-Chiral, Aromatic Side Chains: Sequence Requirements for the Formation of Stable Peptoid Helices
journal, July 2001

Imaging Early Endothelial Inflammation Following Stroke by Core Shell Silica Superparamagnetic Glyconanoparticles That Target Selectin
journal, March 2014

Galactose Encapsulated Multifunctional Nanoparticle for HepG2 Cell Internalization
journal, September 2010

Bacterial Adhesins: Common Themes and Variations in Architecture and Assembly
journal, January 1999

Glycoconjugate Nanoribbons from the Self-Assembly of Carbohydrate−Peptide Block Molecules for Controllable Bacterial Cell Cluster Formation
journal, May 2007

Glycosylated Peptoid Nanosheets as a Multivalent Scaffold for Protein Recognition
journal, February 2018

Pathogen Inhibition by Multivalent Ligand Architectures
journal, July 2016

Glycodendriproteins: A Synthetic Glycoprotein Mimic Enzyme with Branched Sugar-Display Potently Inhibits Bacterial Aggregation
journal, April 2004

Lipid Rafts As a Membrane-Organizing Principle
journal, December 2009

Small-molecule ligands strongly affect the Förster resonance energy transfer between a quantum dot and a fluorescent protein
journal, January 2011

Iodide as a Fluorescence Quencher and Promoter—Mechanisms and Possible Implications
journal, September 2010

Assembly and molecular order of two-dimensional peptoid nanosheets through the oil–water interface
journal, September 2014

Implicit-Solvent Coarse-Grained Simulation with a Fluctuating Interface Reveals a Molecular Mechanism for Peptoid Monolayer Buckling
journal, December 2015

Evaluating polymeric biomaterial–environment interfaces by Langmuir monolayer techniques
journal, May 2017

Electronic Detection of Lectins Using Carbohydrate-Functionalized Nanostructures: Graphene versus Carbon Nanotubes
journal, December 2011

Hierarchical Self-Assembly of a Biomimetic Diblock Copolypeptoid into Homochiral Superhelices
journal, November 2010

Shaken, Not Stirred: Collapsing a Peptoid Monolayer To Produce Free-Floating, Stable Nanosheets
journal, December 2011

Multivalent Peptide and Protein Dendrimers Using Native Chemical Ligation
journal, August 2005

Spatiotemporal control and superselectivity in supramolecular polymers using multivalency
journal, July 2013

Discovery of Stable and Selective Antibody Mimetics from Combinatorial Libraries of Polyvalent, Loop-Functionalized Peptoid Nanosheets
journal, December 2019

Antibody-Mimetic Peptoid Nanosheet for Label-Free Serum-Based Diagnosis of Alzheimer's Disease
journal, June 2017

Cyclic Peptoids
journal, March 2007

Ligand-mediated Changes in the Tryptophan Synthase Indole Tunnel Probed by Nile Red Fluorescence with Wild Type, Mutant, and Chemically Modified Enzymes
journal, March 1995

Structure and phase transitions in Langmuir monolayers
journal, April 1999

Designing super selectivity in multivalent nano-particle binding
journal, June 2011

Multivalency at Interfaces: Supramolecular Carbohydrate-Functionalized Graphene Derivatives for Bacterial Capture, Release, and Disinfection
journal, August 2015

Sequence Programmable Peptoid Polymers for Diverse Materials Applications
journal, April 2015

Molecular Engineering of the Peptoid Nanosheet Hydrophobic Core
journal, October 2016

Glycosidase Inhibition with Fullerene Iminosugar Balls: A Dramatic Multivalent Effect
journal, July 2010

Structure–Rheology Relationship in Nanosheet-Forming Peptoid Monolayers
journal, October 2016

Peptoid nanosheets exhibit a new secondary-structure motif
journal, October 2015

Interaction of the Shiga-like Toxin Type 1 B-Subunit with Its Carbohydrate Receptor
journal, December 1994

Selective Binding of Mannose-Encapsulated Gold Nanoparticles to Type 1 Pili in Escherichia coli
journal, April 2002

Antibody-Mimetic Peptoid Nanosheets for Molecular Recognition
journal, September 2013

Structure-Determining Step in the Hierarchical Assembly of Peptoid Nanosheets
journal, October 2014

Characterization of Escherichia coli Type 1 Pilus Mutants with Altered Binding Specificities
journal, July 2001

A Sugar-Functionalized Amphiphilic Pillar[5]arene: Synthesis, Self-Assembly in Water, and Application in Bacterial Cell Agglutination
journal, May 2013

A Peptoid Ribbon Secondary Structure
journal, April 2013

Carbon Nanotube/Biocompatible Bola-Amphiphile Supramolecular Biohybrid Materials: Preparation and Their Application in Bacterial Cell Agglutination
journal, September 2013