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Title: Heterogeneity in Hyporheic Flow, Pore Water Chemistry, and Microbial Community Composition in an Alpine Streambed

Authors:
ORCiD logo [1]; ORCiD logo [1];  [2]; ORCiD logo [1];  [1];  [1]; ORCiD logo [3]; ORCiD logo [4]; ORCiD logo [5]
  1. School of Earth SciencesThe Ohio State University Columbus OH USA
  2. School of Environment and Natural ResourcesThe Ohio State University Columbus OH USA
  3. Hydrogeophysics BranchU.S. Geological Survey Storrs CT USA
  4. Lawrence Berkeley National Laboratory Berkeley CA USA, Rocky Mountain Biological Laboratory Gothic CO USA
  5. Department of Soil and Crop ScienceColorado State University Fort Collins CO USA
Publication Date:
Sponsoring Org.:
USDOE
OSTI Identifier:
1579449
Grant/Contract Number:  
DE‐SC0016488
Resource Type:
Publisher's Accepted Manuscript
Journal Name:
Journal of Geophysical Research. Biogeosciences
Additional Journal Information:
Journal Name: Journal of Geophysical Research. Biogeosciences Journal Volume: 124 Journal Issue: 11; Journal ID: ISSN 2169-8953
Publisher:
American Geophysical Union (AGU)
Country of Publication:
United States
Language:
English

Citation Formats

Nelson, Amelia R., Sawyer, Audrey H., Gabor, Rachel S., Saup, Casey M., Bryant, Savannah R., Harris, Kira D., Briggs, Martin A., Williams, Kenneth H., and Wilkins, Michael J. Heterogeneity in Hyporheic Flow, Pore Water Chemistry, and Microbial Community Composition in an Alpine Streambed. United States: N. p., 2019. Web. doi:10.1029/2019JG005226.
Nelson, Amelia R., Sawyer, Audrey H., Gabor, Rachel S., Saup, Casey M., Bryant, Savannah R., Harris, Kira D., Briggs, Martin A., Williams, Kenneth H., & Wilkins, Michael J. Heterogeneity in Hyporheic Flow, Pore Water Chemistry, and Microbial Community Composition in an Alpine Streambed. United States. doi:10.1029/2019JG005226.
Nelson, Amelia R., Sawyer, Audrey H., Gabor, Rachel S., Saup, Casey M., Bryant, Savannah R., Harris, Kira D., Briggs, Martin A., Williams, Kenneth H., and Wilkins, Michael J. Fri . "Heterogeneity in Hyporheic Flow, Pore Water Chemistry, and Microbial Community Composition in an Alpine Streambed". United States. doi:10.1029/2019JG005226.
@article{osti_1579449,
title = {Heterogeneity in Hyporheic Flow, Pore Water Chemistry, and Microbial Community Composition in an Alpine Streambed},
author = {Nelson, Amelia R. and Sawyer, Audrey H. and Gabor, Rachel S. and Saup, Casey M. and Bryant, Savannah R. and Harris, Kira D. and Briggs, Martin A. and Williams, Kenneth H. and Wilkins, Michael J.},
abstractNote = {},
doi = {10.1029/2019JG005226},
journal = {Journal of Geophysical Research. Biogeosciences},
number = 11,
volume = 124,
place = {United States},
year = {2019},
month = {11}
}

Journal Article:
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Works referenced in this record:

The thermal regime of rivers: a review
journal, August 2006


Spectrofluorometric characterization of dissolved organic matter for indication of precursor organic material and aromaticity
journal, January 2001

  • McKnight, Diane M.; Boyer, Elizabeth W.; Westerhoff, Paul K.
  • Limnology and Oceanography, Vol. 46, Issue 1
  • DOI: 10.4319/lo.2001.46.1.0038

Fluorescence Intensity Calibration Using the Raman Scatter Peak of Water
journal, August 2009


Seasonal biogeochemical hotspots in the streambed around restoration structures
journal, August 2008


Differences in Hyporheic-Zone Microbial Community Structure along a Heavy-Metal Contamination Gradient
journal, September 2003


Differentiating with fluorescence spectroscopy the sources of dissolved organic matter in soils subjected to drying
journal, January 1999


Spatial and temporal variation of microbial respiration rates in a blackwater stream
journal, October 1996


Anoxia stimulates microbially catalyzed metal release from Animas River sediments
journal, January 2017

  • Saup, Casey M.; Williams, Kenneth H.; Rodríguez-Freire, Lucía
  • Environmental Science: Processes & Impacts, Vol. 19, Issue 4
  • DOI: 10.1039/C7EM00036G

Microbial production, enzyme activity, and carbon turnover in surface sediments of the Hudson River estuary
journal, September 1995

  • Sinsabaugh, R. L.; Findlay, S.
  • Microbial Ecology, Vol. 30, Issue 2
  • DOI: 10.1007/BF00172569

Effect of enhanced manganese oxidation in the hyporheic zone on basin-scale geochemical mass balance
journal, April 1998

  • Harvey, Judson W.; Fuller, Christopher C.
  • Water Resources Research, Vol. 34, Issue 4
  • DOI: 10.1029/97WR03606

1DTempPro: Analyzing Temperature Profiles for Groundwater/Surface-water Exchange: Ground Water xx, no. xx: xx-xx
journal, April 2013

  • Voytek, Emily B.; Drenkelfuss, Anja; Day-Lewis, Frederick D.
  • Groundwater, Vol. 52, Issue 2
  • DOI: 10.1111/gwat.12051

Metabolic and structural response of hyporheic microbial communities to variations in supply of dissolved organic matter
journal, July 2003

  • Findlay, Stuart E. G.; Sinsabaugh, Robert L.; Sobczak, William V.
  • Limnology and Oceanography, Vol. 48, Issue 4
  • DOI: 10.4319/lo.2003.48.4.1608

Influence of Stream‐Subsurface Exchange Flux and Bacterial Biofilms on Oxygen Consumption Under Nutrient‐Rich Conditions
journal, July 2018

  • De Falco, N.; Boano, F.; Bogler, A.
  • Journal of Geophysical Research: Biogeosciences, Vol. 123, Issue 7
  • DOI: 10.1029/2017JG004372

Single-Cell Genomics Reveals a Diverse Metabolic Potential of Uncultivated Desulfatiglans-Related Deltaproteobacteria Widely Distributed in Marine Sediment
journal, September 2018


Responses of microbial activity in hyporheic pore water to biogeochemical changes in a drying headwater stream
journal, February 2019

  • Harjung, Astrid; Perujo, Núria; Butturini, Andrea
  • Freshwater Biology
  • DOI: 10.1111/fwb.13258

Slower snowmelt in a warmer world
journal, February 2017

  • Musselman, Keith N.; Clark, Martyn P.; Liu, Changhai
  • Nature Climate Change, Vol. 7, Issue 3
  • DOI: 10.1038/nclimate3225

Seasonal hyporheic dynamics control coupled microbiology and geochemistry in Colorado River sediments: COLORADO RIVER SEDIMENT BIOGEOCHEMISTRY
journal, December 2016

  • Danczak, Robert E.; Sawyer, Audrey H.; Williams, Kenneth H.
  • Journal of Geophysical Research: Biogeosciences, Vol. 121, Issue 12
  • DOI: 10.1002/2016JG003527

1DTempPro V2: New Features for Inferring Groundwater/Surface-Water Exchange
journal, September 2015

  • Koch, Franklin W.; Voytek, Emily B.; Day-Lewis, Frederick D.
  • Groundwater, Vol. 54, Issue 3
  • DOI: 10.1111/gwat.12369

Lateral hyporheic exchange throughout the Mississippi River network
journal, May 2014

  • Kiel, Brian A.; Bayani Cardenas, M.
  • Nature Geoscience, Vol. 7, Issue 6
  • DOI: 10.1038/ngeo2157

Earlier spring snowmelt in northern Alaska as an indicator of climate change: EARLY SNOWMELT AS AN INDICATOR OF CLIMATE CHANGE
journal, May 2002

  • Stone, Robert S.; Dutton, Ellsworth G.; Harris, Joyce M.
  • Journal of Geophysical Research: Atmospheres, Vol. 107, Issue D10
  • DOI: 10.1029/2000JD000286

Biogeochemical Hot Spots and Hot Moments at the Interface of Terrestrial and Aquatic Ecosystems
journal, June 2003


Relating hyporheic fluxes, residence times, and redox-sensitive biogeochemical processes upstream of beaver dams
journal, June 2013

  • Briggs, Martin A.; Lautz, Laura K.; Hare, Danielle K.
  • Freshwater Science, Vol. 32, Issue 2
  • DOI: 10.1899/12-110.1

Influence of hyporheic flow and geomorphology on temperature of a large, gravel-bed river, Clackamas River, Oregon, USA
journal, January 2008

  • Burkholder, Barbara K.; Grant, Gordon E.; Haggerty, Roy
  • Hydrological Processes, Vol. 22, Issue 7
  • DOI: 10.1002/hyp.6984

Residence time of bedform-driven hyporheic exchange
journal, October 2008


Exploring dissolved organic carbon cycling at the stream–groundwater interface across a third-order, lowland stream network
journal, December 2017


The Effect of streambed topography on surface-subsurface water exchange in mountain catchments
journal, January 1993

  • Harvey, Judson W.; Bencala, Kenneth E.
  • Water Resources Research, Vol. 29, Issue 1
  • DOI: 10.1029/92WR01960

Changes in the Timing of Snowmelt and Streamflow in Colorado: A Response to Recent Warming
journal, May 2010


Effect of experimental wood addition on hyporheic exchange and thermal dynamics in a losing meadow stream: LARGE WOOD ADDITION IN LOSING STREAM
journal, October 2012

  • Sawyer, Audrey H.; Cardenas, M. Bayani
  • Water Resources Research, Vol. 48, Issue 10
  • DOI: 10.1029/2011WR011776

Denitrification in the Mississippi River network controlled by flow through river bedforms
journal, October 2015

  • Gomez-Velez, Jesus D.; Harvey, Judson W.; Cardenas, M. Bayani
  • Nature Geoscience, Vol. 8, Issue 12
  • DOI: 10.1038/ngeo2567

Quantifying rates of methanogenesis and methanotrophy in Lake Kinneret sediments (Israel) using pore-water profiles
journal, July 2011


The Functional Significance of the Hyporheic zone in Streams and Rivers
journal, November 1998


Fluorescence Inner-Filtering Correction for Determining the Humification Index of Dissolved Organic Matter
journal, February 2002

  • Ohno, Tsutomu
  • Environmental Science & Technology, Vol. 36, Issue 4
  • DOI: 10.1021/es0155276

Abiotic aspects of channels and floodplains in riparian ecology
journal, November 1998


Spatial and Temporal Dynamics of Dissolved Oxygen Concentrations and Bioactivity in the Hyporheic Zone
journal, March 2018

  • Reeder, W. Jeffery; Quick, Annika M.; Farrell, Tiffany B.
  • Water Resources Research, Vol. 54, Issue 3
  • DOI: 10.1002/2017WR021388

Bioclogging in porous media: Model development and sensitivity to initial conditions
journal, May 2009


Retention and Transport of Nutrients in a Third-Order Stream: Channel Processes
journal, December 1989

  • Triska, Frank J.; Kennedy, Vance C.; Avanzino, Ronald J.
  • Ecology, Vol. 70, Issue 6
  • DOI: 10.2307/1938119

Evaluation of Specific Ultraviolet Absorbance as an Indicator of the Chemical Composition and Reactivity of Dissolved Organic Carbon
journal, October 2003

  • Weishaar, James L.; Aiken, George R.; Bergamaschi, Brian A.
  • Environmental Science & Technology, Vol. 37, Issue 20
  • DOI: 10.1021/es030360x

Groundwater–surface water mixing shifts ecological assembly processes and stimulates organic carbon turnover
journal, April 2016

  • Stegen, James C.; Fredrickson, James K.; Wilkins, Michael J.
  • Nature Communications, Vol. 7, Issue 1
  • DOI: 10.1038/ncomms11237

Sinuosity-driven hyporheic exchange in meandering rivers: HYPORHEIC EXCHANGE IN MEANDERING RIVERS
journal, September 2006

  • Boano, Fulvio; Camporeale, Carlo; Revelli, Roberto
  • Geophysical Research Letters, Vol. 33, Issue 18
  • DOI: 10.1029/2006GL027630

Hydrodynamics of coupled flow above and below a sediment–water interface with triangular bedforms
journal, March 2007


Snowmelt Induced Hydrologic Perturbations Drive Dynamic Microbiological and Geochemical Behaviors across a Shallow Riparian Aquifer
journal, May 2016

  • Danczak, Robert E.; Yabusaki, Steven B.; Williams, Kenneth H.
  • Frontiers in Earth Science, Vol. 4
  • DOI: 10.3389/feart.2016.00057

Arsenic mobilization in the hyporheic zone of a contaminated stream
journal, November 1999

  • Nagorski, Sonia A.; Moore, Johnnie N.
  • Water Resources Research, Vol. 35, Issue 11
  • DOI: 10.1029/1999WR900204