A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1
Abstract
Nucleic acids from bacteria or viruses induce potent immune responses in infected cells. The detection of pathogen-derived nucleic acids is a central strategy by which the host senses infection and initiates protective immune responses. Cyclic GMP-AMP synthase (cGAS) is a double-stranded DNA sensor. It catalyses the synthesis of cyclic GMP-AMP (cGAMP), which stimulates the induction of type I interferons through the STING-TBK1-IRF-3 signalling axis. STING oligomerizes after binding of cGAMP, leading to the recruitment and activation of the TBK1 kinase. The IRF-3 transcription factor is then recruited to the signalling complex and activated by TBK1. Phosphorylated IRF-3 translocates to the nucleus and initiates the expression of type I interferons. However, the precise mechanisms that govern activation of STING by cGAMP and subsequent activation of TBK1 by STING remain unclear. Here we show that a conserved PLPLRT/SD motif within the C-terminal tail of STING mediates the recruitment and activation of TBK1. Crystal structures of TBK1 bound to STING reveal that the PLPLRT/SD motif binds to the dimer interface of TBK1. Cell-based studies confirm that the direct interaction between TBK1 and STING is essential for induction of IFNβ after cGAMP stimulation. Moreover, we show that full-length STING oligomerizes after it binds cGAMP,more »
- Authors:
-
- Texas A & M Univ., College Station, TX (United States)
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Texas A & M Univ. Health Science Center, College Station, TX (United States)
- Florida State Univ., Tallahassee, FL (United States)
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES)
- OSTI Identifier:
- 1577334
- Grant/Contract Number:
- AC02-05CH11231
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Nature (London)
- Additional Journal Information:
- Journal Name: Nature (London); Journal Volume: 569; Journal Issue: 7758; Journal ID: ISSN 0028-0836
- Publisher:
- Nature Publishing Group
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES
Citation Formats
Zhao, Baoyu, Du, Fenglei, Xu, Pengbiao, Shu, Chang, Sankaran, Banumathi, Bell, Samantha L., Liu, Mengmeng, Lei, Yuanjiu, Gao, Xinsheng, Fu, Xiaofeng, Zhu, Fanxiu, Liu, Yang, Laganowsky, Arthur, Zheng, Xueyun, Ji, Jun -Yuan, West, A. Phillip, Watson, Robert O., and Li, Pingwei. A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1. United States: N. p., 2019.
Web. doi:10.1038/s41586-019-1228-x.
Zhao, Baoyu, Du, Fenglei, Xu, Pengbiao, Shu, Chang, Sankaran, Banumathi, Bell, Samantha L., Liu, Mengmeng, Lei, Yuanjiu, Gao, Xinsheng, Fu, Xiaofeng, Zhu, Fanxiu, Liu, Yang, Laganowsky, Arthur, Zheng, Xueyun, Ji, Jun -Yuan, West, A. Phillip, Watson, Robert O., & Li, Pingwei. A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1. United States. https://doi.org/10.1038/s41586-019-1228-x
Zhao, Baoyu, Du, Fenglei, Xu, Pengbiao, Shu, Chang, Sankaran, Banumathi, Bell, Samantha L., Liu, Mengmeng, Lei, Yuanjiu, Gao, Xinsheng, Fu, Xiaofeng, Zhu, Fanxiu, Liu, Yang, Laganowsky, Arthur, Zheng, Xueyun, Ji, Jun -Yuan, West, A. Phillip, Watson, Robert O., and Li, Pingwei. Wed .
"A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1". United States. https://doi.org/10.1038/s41586-019-1228-x. https://www.osti.gov/servlets/purl/1577334.
@article{osti_1577334,
title = {A conserved PLPLRT/SD motif of STING mediates the recruitment and activation of TBK1},
author = {Zhao, Baoyu and Du, Fenglei and Xu, Pengbiao and Shu, Chang and Sankaran, Banumathi and Bell, Samantha L. and Liu, Mengmeng and Lei, Yuanjiu and Gao, Xinsheng and Fu, Xiaofeng and Zhu, Fanxiu and Liu, Yang and Laganowsky, Arthur and Zheng, Xueyun and Ji, Jun -Yuan and West, A. Phillip and Watson, Robert O. and Li, Pingwei},
abstractNote = {Nucleic acids from bacteria or viruses induce potent immune responses in infected cells. The detection of pathogen-derived nucleic acids is a central strategy by which the host senses infection and initiates protective immune responses. Cyclic GMP-AMP synthase (cGAS) is a double-stranded DNA sensor. It catalyses the synthesis of cyclic GMP-AMP (cGAMP), which stimulates the induction of type I interferons through the STING-TBK1-IRF-3 signalling axis. STING oligomerizes after binding of cGAMP, leading to the recruitment and activation of the TBK1 kinase. The IRF-3 transcription factor is then recruited to the signalling complex and activated by TBK1. Phosphorylated IRF-3 translocates to the nucleus and initiates the expression of type I interferons. However, the precise mechanisms that govern activation of STING by cGAMP and subsequent activation of TBK1 by STING remain unclear. Here we show that a conserved PLPLRT/SD motif within the C-terminal tail of STING mediates the recruitment and activation of TBK1. Crystal structures of TBK1 bound to STING reveal that the PLPLRT/SD motif binds to the dimer interface of TBK1. Cell-based studies confirm that the direct interaction between TBK1 and STING is essential for induction of IFNβ after cGAMP stimulation. Moreover, we show that full-length STING oligomerizes after it binds cGAMP, and highlight this as an essential step in the activation of STING-mediated signalling. Furthermore, these findings provide a structural basis for the development of STING agonists and antagonists for the treatment of cancer and autoimmune disorders.},
doi = {10.1038/s41586-019-1228-x},
journal = {Nature (London)},
number = 7758,
volume = 569,
place = {United States},
year = {Wed May 22 00:00:00 EDT 2019},
month = {Wed May 22 00:00:00 EDT 2019}
}
Web of Science
Works referenced in this record:
STING Specifies IRF3 Phosphorylation by TBK1 in the Cytosolic DNA Signaling Pathway
journal, March 2012
- Tanaka, Y.; Chen, Z. J.
- Science Signaling, Vol. 5, Issue 214
Cyclic GMP-AMP Containing Mixed Phosphodiester Linkages Is An Endogenous High-Affinity Ligand for STING
journal, July 2013
- Zhang, Xu; Shi, Heping; Wu, Jiaxi
- Molecular Cell, Vol. 51, Issue 2
Triggering the Interferon Antiviral Response Through an IKK-Related Pathway
journal, April 2003
- Sharma, S.
- Science, Vol. 300, Issue 5622
Regulation and function of the cGAS–STING pathway of cytosolic DNA sensing
journal, September 2016
- Chen, Qi; Sun, Lijun; Chen, Zhijian J.
- Nature Immunology, Vol. 17, Issue 10
Structural Insights into the Functions of TBK1 in Innate Antimicrobial Immunity
journal, July 2013
- Shu, Chang; Sankaran, Banumathi; Chaton, Catherine T.
- Structure, Vol. 21, Issue 7
Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins
journal, June 2016
- Zhao, Baoyu; Shu, Chang; Gao, Xinsheng
- Proceedings of the National Academy of Sciences, Vol. 113, Issue 24
RIG-I-like receptors: cytoplasmic sensors for non-self RNA: RIG-I-like receptors
journal, August 2011
- Kato, Hiroki; Takahasi, Kiyohiro; Fujita, Takashi
- Immunological Reviews, Vol. 243, Issue 1
Cyclic GMP-AMP Synthase Is a Cytosolic DNA Sensor That Activates the Type I Interferon Pathway
journal, December 2012
- Sun, L.; Wu, J.; Du, F.
- Science, Vol. 339, Issue 6121
Cryo-EM structures of STING reveal its mechanism of activation by cyclic GMP–AMP
journal, March 2019
- Shang, Guijun; Zhang, Conggang; Chen, Zhijian J.
- Nature, Vol. 567, Issue 7748
The Innate Immune DNA Sensor cGAS Produces a Noncanonical Cyclic Dinucleotide that Activates Human STING
journal, May 2013
- Diner, Elie J.; Burdette, Dara L.; Wilson, Stephen C.
- Cell Reports, Vol. 3, Issue 5
PHENIX: a comprehensive Python-based system for macromolecular structure solution
journal, January 2010
- Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
- Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221
Innate Immune Sensing and Signaling of Cytosolic Nucleic Acids
journal, March 2014
- Wu, Jiaxi; Chen, Zhijian J.
- Annual Review of Immunology, Vol. 32, Issue 1
Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells
journal, December 2013
- Shalem, Ophir; Sanjana, Neville E.; Hartenian, Ella
- Science, Vol. 343, Issue 6166, p. 84-87
STING is an endoplasmic reticulum adaptor that facilitates innate immune signalling
journal, August 2008
- Ishikawa, Hiroki; Barber, Glen N.
- Nature, Vol. 455, Issue 7213
STING is a direct innate immune sensor of cyclic di-GMP
journal, September 2011
- Burdette, Dara L.; Monroe, Kathryn M.; Sotelo-Troha, Katia
- Nature, Vol. 478, Issue 7370
Innate immune DNA sensing pathways: STING, AIMII and the regulation of interferon production and inflammatory responses
journal, February 2011
- Barber, Glen N.
- Current Opinion in Immunology, Vol. 23, Issue 1
Integrating macromolecular X-ray diffraction data with the graphical user interface iMosflm
journal, June 2017
- Powell, Harold R.; Battye, T. Geoff G.; Kontogiannis, Luke
- Nature Protocols, Vol. 12, Issue 7
Cyclic [G(2′,5′)pA(3′,5′)p] Is the Metazoan Second Messenger Produced by DNA-Activated Cyclic GMP-AMP Synthase
journal, May 2013
- Gao, Pu; Ascano, Manuel; Wu, Yang
- Cell, Vol. 153, Issue 5
cGAS produces a 2′-5′-linked cyclic dinucleotide second messenger that activates STING
journal, May 2013
- Ablasser, Andrea; Goldeck, Marion; Cavlar, Taner
- Nature, Vol. 498, Issue 7454
Immune Sensing of DNA
journal, May 2013
- Paludan, Søren R.; Bowie, Andrew G.
- Immunity, Vol. 38, Issue 5
Recognition of Endogenous Nucleic Acids by the Innate Immune System
journal, April 2016
- Roers, Axel; Hiller, Björn; Hornung, Veit
- Immunity, Vol. 44, Issue 4
Experimental phasing with SHELXC / D / E : combining chain tracing with density modification
journal, March 2010
- Sheldrick, George M.
- Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 4
Structure of STING bound to cyclic di-GMP reveals the mechanism of cyclic dinucleotide recognition by the immune system
journal, June 2012
- Shu, Chang; Yi, Guanghui; Watts, Tylan
- Nature Structural & Molecular Biology, Vol. 19, Issue 7
STING and the innate immune response to nucleic acids in the cytosol
journal, December 2012
- Burdette, Dara L.; Vance, Russell E.
- Nature Immunology, Vol. 14, Issue 1
IKKε and TBK1 are essential components of the IRF3 signaling pathway
journal, April 2003
- Fitzgerald, Katherine A.; McWhirter, Sarah M.; Faia, Kerrie L.
- Nature Immunology, Vol. 4, Issue 5
Phosphorylation of innate immune adaptor proteins MAVS, STING, and TRIF induces IRF3 activation
journal, January 2015
- Liu, S.; Cai, X.; Wu, J.
- Science, Vol. 347, Issue 6227
STING regulates intracellular DNA-mediated, type I interferon-dependent innate immunity
journal, September 2009
- Ishikawa, Hiroki; Ma, Zhe; Barber, Glen N.
- Nature, Vol. 461, Issue 7265
Cyclic GMP-AMP Is an Endogenous Second Messenger in Innate Immune Signaling by Cytosolic DNA
journal, December 2012
- Wu, J.; Sun, L.; Chen, X.
- Science, Vol. 339, Issue 6121
Cavin1 intrinsically disordered domains are essential for fuzzy electrostatic interactions and caveola formation
journal, February 2021
- Tillu, Vikas A.; Rae, James; Gao, Ya
- Nature Communications, Vol. 12, Issue 1
PHENIX: a comprehensive Python-based system for macromolecular structure solution.
text, January 2010
- Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
- Apollo - University of Cambridge Repository
Blockade of USP14 potentiates type I interferon signaling and radiation-induced antitumor immunity via preventing IRF3 deubiquitination
journal, October 2022
- Wu, Weijian; Xu, Huiying; Liao, Chenyang
- Cellular Oncology, Vol. 45, Issue 6
The Innate Immune DNA Sensor cGAS Produces a Noncanonical Cyclic Dinucleotide that Activates Human STING
journal, May 2013
- Diner, Elie J.; Burdette, Dara L.; Wilson, Stephen C.
- Cell Reports, Vol. 3, Issue 5
Immune Sensing of DNA
journal, May 2013
- Paludan, Søren R.; Bowie, Andrew G.
- Immunity, Vol. 38, Issue 5
Recognition of Endogenous Nucleic Acids by the Innate Immune System
journal, April 2016
- Roers, Axel; Hiller, Björn; Hornung, Veit
- Immunity, Vol. 44, Issue 4
Cyclic GMP-AMP Containing Mixed Phosphodiester Linkages Is An Endogenous High-Affinity Ligand for STING
journal, July 2013
- Zhang, Xu; Shi, Heping; Wu, Jiaxi
- Molecular Cell, Vol. 51, Issue 2
Building unique bonds to fight misplaced DNA
journal, June 2013
- Fagundes, Caio T.; O'Neill, Luke A. J.
- Cell Research, Vol. 23, Issue 9
STING is an endoplasmic reticulum adaptor that facilitates innate immune signalling
journal, August 2008
- Ishikawa, Hiroki; Barber, Glen N.
- Nature, Vol. 455, Issue 7213
cGAS produces a 2′-5′-linked cyclic dinucleotide second messenger that activates STING
journal, May 2013
- Ablasser, Andrea; Goldeck, Marion; Cavlar, Taner
- Nature, Vol. 498, Issue 7454
Regulation and function of the cGAS–STING pathway of cytosolic DNA sensing
journal, September 2016
- Chen, Qi; Sun, Lijun; Chen, Zhijian J.
- Nature Immunology, Vol. 17, Issue 10
Integrating macromolecular X-ray diffraction data with the graphical user interface iMosflm
journal, June 2017
- Powell, Harold R.; Battye, T. Geoff G.; Kontogiannis, Luke
- Nature Protocols, Vol. 12, Issue 7
Structure of STING bound to cyclic di-GMP reveals the mechanism of cyclic dinucleotide recognition by the immune system
journal, June 2012
- Shu, Chang; Yi, Guanghui; Watts, Tylan
- Nature Structural & Molecular Biology, Vol. 19, Issue 7
Hydroxychloroquine modulates immunological pathways activated by RNA:DNA hybrids in Aicardi–Goutières syndrome patients carrying RNASEH2 mutations
journal, March 2021
- Garau, Jessica; Sproviero, Daisy; Dragoni, Francesca
- Cellular & Molecular Immunology, Vol. 18, Issue 6
Cryo-EM structures of STING reveal its mechanism of activation by cyclic GMP–AMP
journal, March 2019
- Shang, Guijun; Zhang, Conggang; Chen, Zhijian J.
- Nature, Vol. 567, Issue 7748
Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins
journal, June 2016
- Zhao, Baoyu; Shu, Chang; Gao, Xinsheng
- Proceedings of the National Academy of Sciences, Vol. 113, Issue 24
Triggering the Interferon Antiviral Response Through an IKK-Related Pathway
journal, April 2003
- Sharma, S.
- Science, Vol. 300, Issue 5622
Cyclic GMP-AMP Synthase Is a Cytosolic DNA Sensor That Activates the Type I Interferon Pathway
journal, December 2012
- Sun, L.; Wu, J.; Du, F.
- Science, Vol. 339, Issue 6121
Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells
journal, December 2013
- Shalem, Ophir; Sanjana, Neville E.; Hartenian, Ella
- Science, Vol. 343, Issue 6166, p. 84-87
STING Specifies IRF3 Phosphorylation by TBK1 in the Cytosolic DNA Signaling Pathway
journal, March 2012
- Tanaka, Y.; Chen, Z. J.
- Science Signaling, Vol. 5, Issue 214
Virus-Dependent Phosphorylation of the IRF-3 Transcription Factor Regulates Nuclear Translocation, Transactivation Potential, and Proteasome-Mediated Degradation
journal, May 1998
- Lin, Rongtuan; Heylbroeck, Christophe; Pitha, Paula M.
- Molecular and Cellular Biology, Vol. 18, Issue 5
Innate Immune Sensing and Signaling of Cytosolic Nucleic Acids
journal, March 2014
- Wu, Jiaxi; Chen, Zhijian J.
- Annual Review of Immunology, Vol. 32, Issue 1
PHENIX: a comprehensive Python-based system for macromolecular structure solution.
text, January 2010
- Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
- Apollo - University of Cambridge Repository
Works referencing / citing this record:
Regulation of cGAS- and RLR-mediated immunity to nucleic acids
journal, December 2019
- Ablasser, Andrea; Hur, Sun
- Nature Immunology, Vol. 21, Issue 1
STING Activation and its Application in Immuno-Oncology
journal, November 2019
- Lian, Yiqian; Duffy, Kevin J.; Yang, Jingsong
- Current Topics in Medicinal Chemistry, Vol. 19, Issue 24