The future of legume genetic data resources: Challenges, opportunities, and priorities
- Authors:
-
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- Boyce Thompson Institute Ithaca New York USA
- Department of Plant SciencesUniversity of Saskatchewan Saskatoon Saskatchewan Canada
- National Center for Genome Resources Santa Fe New Mexico
- Department of Computer ScienceIowa State University Ames Iowa USA
- USDA‐Agricultural Research Service, Corn Insects and Crop Genetics Research Unit Ames Iowa USA
- Joint Genome Institute, Lawrence Berkeley National Laboratory Berkeley California USA
- J. Craig Venter Institute Rockville Maryland
- Department of Botany and Plant SciencesUniversity of California Riverside California USA
- Department of Plant PathologyUniversity of California Davis Davis California USA
- CyVerse, University of Arizona Tucson Arizona
- USDA‐ARS Plant Germplasm Introduction and TestingWashington State University Pullman Washington USA
- Department of Biological SciencesUniversity of North Texas Denton Texas
- Institute of Biotechnology, Cornell University Ithaca New York USA
- Noble Research Institute LLC Ardmore Oklahoma
- Department of Soil and Crop SciencesColorado State University Fort Collins Colorado
- Department of BiologyTexas Woman's University Denton Texas
- USDA‐ARS National Center for Genetic Resources Preservation Fort Collins Colorado
- Department of HorticultureUniversity of Arkansas Fayetteville Arkansas
- Department of Plant and Soil ScienceUniversity of Vermont Burlington Vermont
- Department of Plant PathologyUniversity of Minnesota St. Paul Minnesota
- Publication Date:
- Sponsoring Org.:
- USDOE
- OSTI Identifier:
- 1575321
- Alternate Identifier(s):
- OSTI ID: 1575322
- Grant/Contract Number:
- DE‐AC02‐05CH112
- Resource Type:
- Published Article
- Journal Name:
- Legume Science
- Additional Journal Information:
- Journal Name: Legume Science Journal Volume: 1 Journal Issue: 1; Journal ID: ISSN 2639-6181
- Publisher:
- Wiley Blackwell (John Wiley & Sons)
- Country of Publication:
- Country unknown/Code not available
- Language:
- English
Citation Formats
Bauchet, Guillaume J., Bett, Kirstin E., Cameron, Connor T., Campbell, Jacqueline D., Cannon, Ethalinda K. S., Cannon, Steven B., Carlson, Joseph W., Chan, Agnes, Cleary, Alan, Close, Timothy J., Cook, Douglas R., Cooksey, Amanda M., Coyne, Clarice, Dash, Sudhansu, Dickstein, Rebecca, Farmer, Andrew D., Fernández‐Baca, David, Hokin, Samuel, Jones, Elizabeth S., Kang, Yun, Monteros, Maria J., Muñoz‐Amatriaín, María, Mysore, Kirankumar S., Pislariu, Catalina I., Richards, Chris, Shi, Ainong, Town, Christopher D., Udvardi, Michael, Wettberg, Eric Bishop, Young, Nevin D., and Zhao, Patrick X. The future of legume genetic data resources: Challenges, opportunities, and priorities. Country unknown/Code not available: N. p., 2019.
Web. doi:10.1002/leg3.16.
Bauchet, Guillaume J., Bett, Kirstin E., Cameron, Connor T., Campbell, Jacqueline D., Cannon, Ethalinda K. S., Cannon, Steven B., Carlson, Joseph W., Chan, Agnes, Cleary, Alan, Close, Timothy J., Cook, Douglas R., Cooksey, Amanda M., Coyne, Clarice, Dash, Sudhansu, Dickstein, Rebecca, Farmer, Andrew D., Fernández‐Baca, David, Hokin, Samuel, Jones, Elizabeth S., Kang, Yun, Monteros, Maria J., Muñoz‐Amatriaín, María, Mysore, Kirankumar S., Pislariu, Catalina I., Richards, Chris, Shi, Ainong, Town, Christopher D., Udvardi, Michael, Wettberg, Eric Bishop, Young, Nevin D., & Zhao, Patrick X. The future of legume genetic data resources: Challenges, opportunities, and priorities. Country unknown/Code not available. doi:10.1002/leg3.16.
Bauchet, Guillaume J., Bett, Kirstin E., Cameron, Connor T., Campbell, Jacqueline D., Cannon, Ethalinda K. S., Cannon, Steven B., Carlson, Joseph W., Chan, Agnes, Cleary, Alan, Close, Timothy J., Cook, Douglas R., Cooksey, Amanda M., Coyne, Clarice, Dash, Sudhansu, Dickstein, Rebecca, Farmer, Andrew D., Fernández‐Baca, David, Hokin, Samuel, Jones, Elizabeth S., Kang, Yun, Monteros, Maria J., Muñoz‐Amatriaín, María, Mysore, Kirankumar S., Pislariu, Catalina I., Richards, Chris, Shi, Ainong, Town, Christopher D., Udvardi, Michael, Wettberg, Eric Bishop, Young, Nevin D., and Zhao, Patrick X. Sun .
"The future of legume genetic data resources: Challenges, opportunities, and priorities". Country unknown/Code not available. doi:10.1002/leg3.16.
@article{osti_1575321,
title = {The future of legume genetic data resources: Challenges, opportunities, and priorities},
author = {Bauchet, Guillaume J. and Bett, Kirstin E. and Cameron, Connor T. and Campbell, Jacqueline D. and Cannon, Ethalinda K. S. and Cannon, Steven B. and Carlson, Joseph W. and Chan, Agnes and Cleary, Alan and Close, Timothy J. and Cook, Douglas R. and Cooksey, Amanda M. and Coyne, Clarice and Dash, Sudhansu and Dickstein, Rebecca and Farmer, Andrew D. and Fernández‐Baca, David and Hokin, Samuel and Jones, Elizabeth S. and Kang, Yun and Monteros, Maria J. and Muñoz‐Amatriaín, María and Mysore, Kirankumar S. and Pislariu, Catalina I. and Richards, Chris and Shi, Ainong and Town, Christopher D. and Udvardi, Michael and Wettberg, Eric Bishop and Young, Nevin D. and Zhao, Patrick X.},
abstractNote = {},
doi = {10.1002/leg3.16},
journal = {Legume Science},
number = 1,
volume = 1,
place = {Country unknown/Code not available},
year = {2019},
month = {11}
}
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DOI: 10.1002/leg3.16
DOI: 10.1002/leg3.16
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Works referenced in this record:
Spatiotemporal Developmental Trajectories in the Arabidopsis Root Revealed Using High-Throughput Single-Cell RNA Sequencing
journal, March 2019
- Denyer, Tom; Ma, Xiaoli; Klesen, Simon
- Developmental Cell, Vol. 48, Issue 6
The genome sequence of segmental allotetraploid peanut Arachis hypogaea
journal, May 2019
- Bertioli, David J.; Jenkins, Jerry; Clevenger, Josh
- Nature Genetics, Vol. 51, Issue 5
Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria
journal, July 2019
- Greenlon, Alex; Chang, Peter L.; Damtew, Zehara Mohammed
- Proceedings of the National Academy of Sciences, Vol. 116, Issue 30
Taking the First Steps towards a Standard for Reporting on Phylogenies: Minimum Information about a Phylogenetic Analysis (MIAPA)
journal, June 2006
- Leebens-Mack, Jim; Vision, Todd; Brenner, Eric
- OMICS: A Journal of Integrative Biology, Vol. 10, Issue 2
A reference genome for common bean and genome-wide analysis of dual domestications
journal, June 2014
- Schmutz, Jeremy; McClean, Phillip E.; Mamidi, Sujan
- Nature Genetics, Vol. 46, Issue 7
Graphtyper enables population-scale genotyping using pangenome graphs
journal, September 2017
- Eggertsson, Hannes P.; Jonsson, Hakon; Kristmundsdottir, Snaedis
- Nature Genetics, Vol. 49, Issue 11
Draft genome sequence of adzuki bean, Vigna angularis
journal, January 2015
- Kang, Yang Jae; Satyawan, Dani; Shim, Sangrea
- Scientific Reports, Vol. 5, Issue 1
Measures for interoperability of phenotypic data: minimum information requirements and formatting
journal, November 2016
- Ćwiek-Kupczyńska, Hanna; Altmann, Thomas; Arend, Daniel
- Plant Methods, Vol. 12, Issue 1
The draft genomes of five agriculturally important African orphan crops
journal, December 2018
- Chang, Yue; Liu, Huan; Liu, Min
- GigaScience, Vol. 8, Issue 3
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
journal, December 2001
- Brazma, Alvis; Hingamp, Pascal; Quackenbush, John
- Nature Genetics, Vol. 29, Issue 4
A reference-grade wild soybean genome
journal, March 2019
- Xie, Min; Chung, Claire Yik-Lok; Li, Man-Wah
- Nature Communications, Vol. 10, Issue 1
An imputation platform to enhance integration of rice genetic resources
journal, August 2018
- Wang, Diane R.; Agosto-Pérez, Francisco J.; Chebotarov, Dmytro
- Nature Communications, Vol. 9, Issue 1
Multiple Polyploidy Events in the Early Radiation of Nodulating and Nonnodulating Legumes
journal, October 2014
- Cannon, Steven B.; McKain, Michael R.; Harkess, Alex
- Molecular Biology and Evolution, Vol. 32, Issue 1
Sequencing of Cultivated Peanut, Arachis hypogaea, Yields Insights into Genome Evolution and Oil Improvement
journal, July 2019
- Chen, Xiaoping; Lu, Qing; Liu, Hao
- Molecular Plant, Vol. 12, Issue 7
The Sol Genomics Network (SGN)—from genotype to phenotype to breeding
journal, November 2014
- Fernandez-Pozo, Noe; Menda, Naama; Edwards, Jeremy D.
- Nucleic Acids Research, Vol. 43, Issue D1
Flapjack--graphical genotype visualization
journal, October 2010
- Milne, I.; Shaw, P.; Stephen, G.
- Bioinformatics, Vol. 26, Issue 24
Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis
journal, May 2018
- Griesmann, Maximilian; Chang, Yue; Liu, Xin
- Science
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement
journal, January 2013
- Varshney, Rajeev K.; Song, Chi; Saxena, Rachit K.
- Nature Biotechnology, Vol. 31, Issue 3
Reconstruction of ancestral genome reveals chromosome evolution history for selected legume species
journal, March 2019
- Ren, Longhui; Huang, Wei; Cannon, Steven B.
- New Phytologist, Vol. 223, Issue 4
The Medicago genome provides insight into the evolution of rhizobial symbioses
journal, November 2011
- Young, Nevin D.; Debellé, Frédéric; Oldroyd, Giles E. D.
- Nature, Vol. 480, Issue 7378
Research priorities for harnessing plant microbiomes in sustainable agriculture
journal, March 2017
- Busby, Posy E.; Soman, Chinmay; Wagner, Maggie R.
- PLOS Biology, Vol. 15, Issue 3
easyGWAS: A Cloud-Based Platform for Comparing the Results of Genome-Wide Association Studies
journal, December 2016
- Grimm, Dominik G.; Roqueiro, Damian; Salomé, Patrice A.
- The Plant Cell, Vol. 29, Issue 1
AraPheno: a public database for Arabidopsis thaliana phenotypes
journal, October 2016
- Seren, Ümit; Grimm, Dominik; Fitz, Joffrey
- Nucleic Acids Research, Vol. 45, Issue D1
The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog
journal, October 2017
- Togninalli, Matteo; Seren, Ümit; Meng, Dazhe
- Nucleic Acids Research, Vol. 46, Issue D1
Multifunctional crop trait ontology for breeders' data: field book, annotation, data discovery and semantic enrichment of the literature
journal, May 2010
- Shrestha, Rosemary; Arnaud, Elizabeth; Mauleon, Ramil
- AoB PLANTS, Vol. 2010
BrAPI—an application programming interface for plant breeding applications
journal, March 2019
- Selby, Peter; Abbeloos, Rafael; Backlund, Jan Erik
- Bioinformatics, Vol. 35, Issue 20
Genebank genomics highlights the diversity of a global barley collection
journal, November 2018
- Milner, Sara G.; Jost, Matthias; Taketa, Shin
- Nature Genetics, Vol. 51, Issue 2
Gigwa—Genotype investigator for genome-wide analyses
journal, June 2016
- Sempéré, Guilhem; Philippe, Florian; Dereeper, Alexis
- GigaScience, Vol. 5, Issue 1
Genome sequence of the palaeopolyploid soybean
journal, January 2010
- Schmutz, Jeremy; Cannon, Steven B.; Schlueter, Jessica
- Nature, Vol. 463, Issue 7278
Are We There Yet? Reliably Estimating the Completeness of Plant Genome Sequences
journal, August 2016
- Veeckman, Elisabeth; Ruttink, Tom; Vandepoele, Klaas
- The Plant Cell, Vol. 28, Issue 8
Genome-Wide Identification of Medicago Peptides Involved in Macronutrient Responses and Nodulation
journal, October 2017
- de Bang, Thomas C.; Lundquist, Peter K.; Dai, Xinbin
- Plant Physiology, Vol. 175, Issue 4
The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut
journal, February 2016
- Bertioli, David John; Cannon, Steven B.; Froenicke, Lutz
- Nature Genetics, Vol. 48, Issue 4
Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover
journal, April 2019
- Griffiths, Andrew G.; Moraga, Roger; Tausen, Marni
- The Plant Cell, Vol. 31, Issue 7
OptiMAS: A Decision Support Tool for Marker-Assisted Assembly of Diverse Alleles
journal, January 2013
- Valente, Fabio; Gauthier, Franck; Bardol, Nicolas
- Journal of Heredity, Vol. 104, Issue 4
Detecting small plant peptides using SPADA (Small Peptide Alignment Discovery Application)
journal, January 2013
- Zhou, Peng; Silverstein, Kevin AT; Gao, Liangliang
- BMC Bioinformatics, Vol. 14, Issue 1
Hierarchically Aligning 10 Legume Genomes Establishes a Family-Level Genomics Platform
journal, March 2017
- Wang, Jinpeng; Sun, Pengchuan; Li, Yuxian
- Plant Physiology, Vol. 174, Issue 1
Legume Crops Phylogeny and Genetic Diversity for Science and Breeding
journal, October 2014
- Smýkal, Petr; Coyne, Clarice J.; Ambrose, Mike J.
- Critical Reviews in Plant Sciences, Vol. 34, Issue 1-3
Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome
journal, December 2010
- Kim, M. Y.; Lee, S.; Van, K.
- Proceedings of the National Academy of Sciences, Vol. 107, Issue 51
Rapid generation cycling of an F 2 population derived from a cross between Lens culinaris Medik. and Lens ervoides (Brign.) Grande after aphanomyces root rot selection
journal, June 2018
- Lulsdorf, Monika M.; Banniza, Sabine
- Plant Breeding, Vol. 137, Issue 4
Towards recommendations for metadata and data handling in plant phenotyping
journal, June 2015
- Krajewski, Paweł; Chen, Dijun; Ćwiek, Hanna
- Journal of Experimental Botany, Vol. 66, Issue 18
An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.)
journal, August 2015
- Parween, Sabiha; Nawaz, Kashif; Roy, Riti
- Scientific Reports, Vol. 5, Issue 1
Cercis: A Non-polyploid Genomic Relic Within the Generally Polyploid Legume Family
journal, April 2019
- Stai, Jacob S.; Yadav, Akshay; Sinou, Carole
- Frontiers in Plant Science, Vol. 10
Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes
journal, March 2017
- Zhou, Peng; Silverstein, Kevin A. T.; Ramaraj, Thiruvarangan
- BMC Genomics, Vol. 18, Issue 1
The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome
journal, November 2015
- Sakai, Hiroaki; Naito, Ken; Ogiso-Tanaka, Eri
- Scientific Reports, Vol. 5, Issue 1
Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement
journal, November 2015
- De Vega, Jose J.; Ayling, Sarah; Hegarty, Matthew
- Scientific Reports, Vol. 5, Issue 1
Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes
journal, February 2016
- Vlasova, Anna; Capella-Gutiérrez, Salvador; Rendón-Anaya, Martha
- Genome Biology, Vol. 17, Issue 1
The Glycine max cv. Enrei Genome for Improvement of Japanese Soybean Cultivars
journal, January 2015
- Shimomura, Michihiko; Kanamori, Hiroyuki; Komatsu, Setsuko
- International Journal of Genomics, Vol. 2015
Field Book: An Open-Source Application for Field Data Collection on Android
journal, January 2014
- Rife, Trevor W.; Poland, Jesse A.
- Crop Science, Vol. 54, Issue 4
Single-Cell RNA Sequencing Resolves Molecular Relationships Among Individual Plant Cells
journal, February 2019
- Ryu, Kook Hui; Huang, Ling; Kang, Hyun Min
- Plant Physiology, Vol. 179, Issue 4
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data
journal, September 2012
- Smith, Richard N.; Aleksic, Jelena; Butano, Daniela
- Bioinformatics, Vol. 28, Issue 23
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
journal, November 2011
- Varshney, Rajeev K.; Chen, Wenbin; Li, Yupeng
- Nature Biotechnology, Vol. 30, Issue 1
Legumes as a Model Plant Family. Genomics for Food and Feed Report of the Cross-Legume Advances through Genomics Conference
journal, April 2005
- Gepts, Paul; Beavis, William D.; Brummer, E. Charles
- Plant Physiology, Vol. 137, Issue 4
solGS: a web-based tool for genomic selection
journal, December 2014
- Tecle, Isaak Y.; Edwards, Jeremy D.; Menda, Naama
- BMC Bioinformatics, Vol. 15, Issue 1
The tomato pan-genome uncovers new genes and a rare allele regulating fruit flavor
journal, May 2019
- Gao, Lei; Gonda, Itay; Sun, Honghe
- Nature Genetics, Vol. 51, Issue 6
Fingerprinting Soybean Germplasm and Its Utility in Genomic Research
journal, July 2015
- Song, Qijian; Hyten, David L.; Jia, Gaofeng
- G3: Genes|Genomes|Genetics, Vol. 5, Issue 10
Dissecting Plant Genomes with the PLAZA Comparative Genomics Platform
journal, December 2011
- Van Bel, Michiel; Proost, Sebastian; Wischnitzki, Elisabeth
- Plant Physiology, Vol. 158, Issue 2
The Impact of Genetic Changes during Crop Domestication on Healthy Food Development
journal, March 2018
- Smýkal, Petr; Nelson, Matthew; Berger, Jens
- Agronomy, Vol. 8, Issue 3
De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits
journal, September 2014
- Li, Ying-hui; Zhou, Guangyu; Ma, Jianxin
- Nature Biotechnology, Vol. 32, Issue 10
A comprehensive draft genome sequence for lupin ( Lupinus angustifolius ), an emerging health food: insights into plant-microbe interactions and legume evolution
journal, September 2016
- Hane, James K.; Ming, Yao; Kamphuis, Lars G.
- Plant Biotechnology Journal, Vol. 15, Issue 3
Copy Number Variation of Multiple Genes at Rhg1 Mediates Nematode Resistance in Soybean
journal, October 2012
- Cook, D. E.; Lee, T. G.; Guo, X.
- Science, Vol. 338, Issue 6111
Genome sequence of mungbean and insights into evolution within Vigna species
journal, November 2014
- Kang, Yang Jae; Kim, Sue K.; Kim, Moon Young
- Nature Communications, Vol. 5, Issue 1
Genome sequencing of adzuki bean ( Vigna angularis ) provides insight into high starch and low fat accumulation and domestication
journal, October 2015
- Yang, Kai; Tian, Zhixi; Chen, Chunhai
- Proceedings of the National Academy of Sciences, Vol. 112, Issue 43
The FAIR Guiding Principles for scientific data management and stewardship
journal, March 2016
- Wilkinson, Mark D.; Dumontier, Michel; Aalbersberg, IJsbrand Jan
- Scientific Data, Vol. 3, Issue 1
Whole-genome landscape of Medicago truncatula symbiotic genes
journal, November 2018
- Pecrix, Yann; Staton, S. Evan; Sallet, Erika
- Nature Plants, Vol. 4, Issue 12
The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species
journal, June 2019
- Walls, Ramona L.; Cooper, Laurel; Elser, Justin
- Frontiers in Plant Science, Vol. 10
Copy Number Variation in Domestication
journal, April 2019
- Lye, Zoe N.; Purugganan, Michael D.
- Trends in Plant Science, Vol. 24, Issue 4
An improved genome release (version Mt4.0) for the model legume Medicago truncatula
journal, January 2014
- Tang, Haibao; Krishnakumar, Vivek; Bidwell, Shelby
- BMC Genomics, Vol. 15, Issue 1
Genome Context Viewer: visual exploration of multiple annotated genomes using microsynteny
journal, November 2017
- Cleary, Alan; Farmer, Andrew
- Bioinformatics, Vol. 34, Issue 9
Adaptation in plant genomes: Bigger is different
journal, January 2018
- Mei, Wenbin; Stetter, Markus G.; Gates, Daniel J.
- American Journal of Botany, Vol. 105, Issue 1
Genome Structure of the Legume, Lotus japonicus
journal, May 2008
- Sato, S.; Nakamura, Y.; Kaneko, T.
- DNA Research, Vol. 15, Issue 4
InterMine: extensive web services for modern biology
journal, April 2014
- Kalderimis, Alex; Lyne, Rachel; Butano, Daniela
- Nucleic Acids Research, Vol. 42, Issue W1
Next-generation genome annotation: we still struggle to get it right
journal, May 2019
- Salzberg, Steven L.
- Genome Biology, Vol. 20, Issue 1
A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny – The Legume Phylogeny Working Group (LPWG)
journal, February 2017
- Azani, Nasim; Babineau, Marielle; Bailey, C. Donovan
- Taxon, Vol. 66, Issue 1
A draft genome for Spatholobus suberectus
journal, July 2019
- Qin, Shuangshuang; Wu, Lingqing; Wei, Kunhua
- Scientific Data, Vol. 6, Issue 1
Construction and comparison of three reference‐quality genome assemblies for soybean
journal, October 2019
- Valliyodan, Babu; Cannon, Steven B.; Bayer, Philipp E.
- The Plant Journal, Vol. 100, Issue 5
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
journal, January 2018
- Harper, Lisa; Campbell, Jacqueline; Cannon, Ethalinda K. S.
- Database, Vol. 2018
The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication
journal, May 2019
- Zhuang, Weijian; Chen, Hua; Yang, Meng
- Nature Genetics, Vol. 51, Issue 5
The Mycorrhizal Fungus, Sebacina vermifera, Enhances Seed Germination and Biomass Production in Switchgrass (Panicum virgatum L)
journal, April 2009
- Ghimire, Sita R.; Charlton, Nikki D.; Craven, Kelly D.
- BioEnergy Research, Vol. 2, Issue 1-2
Draft genome sequence of subterranean clover, a reference for genus Trifolium
journal, August 2016
- Hirakawa, Hideki; Kaur, Parwinder; Shirasawa, Kenta
- Scientific Reports, Vol. 6, Issue 1
Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants
journal, June 2007
- Silverstein, Kevin A. T.; Moskal, William A.; Wu, Hank C.
- The Plant Journal, Vol. 51, Issue 2
BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics
journal, December 2017
- Waterhouse, Robert M.; Seppey, Mathieu; Simão, Felipe A.
- Molecular Biology and Evolution, Vol. 35, Issue 3
Patterns and processes in crop domestication: an historical review and quantitative analysis of 203 global food crops: Tansley review
journal, August 2012
- Meyer, Rachel S.; DuVal, Ashley E.; Jensen, Helen R.
- New Phytologist, Vol. 196, Issue 1
A reference genome for pea provides insight into legume genome evolution
journal, September 2019
- Kreplak, Jonathan; Madoui, Mohammed-Amin; Cápal, Petr
- Nature Genetics, Vol. 51, Issue 9
Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana
journal, March 2019
- Jean-Baptiste, Ken; McFaline-Figueroa, José L.; Alexandre, Cristina M.
- The Plant Cell, Vol. 31, Issue 5
Assembly and annotation of a draft genome sequence for Glycine latifolia , a perennial wild relative of soybean
journal, May 2018
- Liu, Qiong; Chang, Sungyul; Hartman, Glen L.
- The Plant Journal, Vol. 95, Issue 1
The genome of cowpea ( Vigna unguiculata [L.] Walp.)
journal, March 2019
- Lonardi, Stefano; Muñoz‐Amatriaín, María; Liang, Qihua
- The Plant Journal, Vol. 98, Issue 5
De novo assembly of a Chinese soybean genome
journal, July 2018
- Shen, Yanting; Liu, Jing; Geng, Haiying
- Science China Life Sciences, Vol. 61, Issue 8
Meta-analysis of genome-wide association studies provides insights into genetic control of tomato flavor
journal, April 2019
- Zhao, Jiantao; Sauvage, Christopher; Zhao, Jinghua
- Nature Communications, Vol. 10, Issue 1