Time-resolved step-scan FTIR difference spectroscopy for the study of photosystem I with different benzoquinones incorporated into the A1 binding site

Makita, Hiroki; Hastings, Gary

doi:10.1016/j.bbabio.2018.08.003

Title: Time-resolved step-scan FTIR difference spectroscopy for the study of photosystem I with different benzoquinones incorporated into the A1 binding site

Journal Article · 01 November 2018 · Biochimica et Biophysica Acta - Bioenergetics

DOI: https://doi.org/10.1016/j.bbabio.2018.08.003 · OSTI ID:1572743

Makita, Hiroki; Hastings, Gary

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Sponsoring Organization:: USDOE

Grant/Contract Number:: SC0017937

OSTI ID:: 1572743

Journal Information:: Biochimica et Biophysica Acta - Bioenergetics, Journal Name: Biochimica et Biophysica Acta - Bioenergetics Journal Issue: 11 Vol. 1859; ISSN 0005-2728

Publisher:: ElsevierCopyright Statement

Country of Publication:: Netherlands

Language:: English

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Vibrational spectroscopy of photosystem I Hastings, Gary Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1847, Issue 1 https://doi.org/10.1016/j.bbabio.2014.07.014	journal	January 2015
Time-resolved visible and infrared difference spectroscopy for the study of photosystem I with different quinones incorporated into the A1 binding site Makita, Hiroki; Zhao, Nan; Hastings, Gary Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1847, Issue 3 https://doi.org/10.1016/j.bbabio.2014.12.007	journal	March 2015
Modeling electron transfer in photosystem I Makita, Hiroki; Hastings, Gary Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1857, Issue 6 https://doi.org/10.1016/j.bbabio.2016.03.015	journal	June 2016
Quinones in the A1 binding site in photosystem I studied using time-resolved FTIR difference spectroscopy Makita, Hiroki; Rohani, Leyla; Zhao, Nan Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1858, Issue 9 https://doi.org/10.1016/j.bbabio.2017.06.006	journal	September 2017
Time-resolved visible and infrared absorption spectroscopy data obtained using photosystem I particles with non-native quinones incorporated into the A1 binding site Makita, Hiroki; Hastings, Gary Data in Brief, Vol. 7 https://doi.org/10.1016/j.dib.2016.04.031	journal	June 2016
Directionality of electron transfer in cyanobacterial photosystem I at 298 and 77 K Makita, Hiroki; Hastings, Gary FEBS Letters, Vol. 589, Issue 13 https://doi.org/10.1016/j.febslet.2015.04.048	journal	May 2015
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Observation of the Reduction and Reoxidation of the Primary Electron Acceptor in Photosystem I Hastings, Gary; Kleinherenbrink, Frank A. M.; Lin, Su Biochemistry, Vol. 33, Issue 11 https://doi.org/10.1021/bi00177a008	journal	March 1994
The Binding Sites of Quinones in Photosynthetic Bacterial Reaction Centers Investigated by Light-Induced FTIR Difference Spectroscopy: Assignment of the QA Vibrations in Rhodobacter sphaeroides Using 18O- or 13C-Labeled Ubiquinones and Vitamin K1 Breton, Jacques; Burie, Jean-Rene; Berthomieu, Catherine Biochemistry, Vol. 33, Issue 16 https://doi.org/10.1021/bi00182a026	journal	April 1994
Kinetics of Charge Separation and A ₀ ^- → A ₁ Electron Transfer in Photosystem I Reaction Centers ^† Savikhin, Sergei; Xu, Wu; Martinsson, Peter Biochemistry, Vol. 40, Issue 31 https://doi.org/10.1021/bi0104165	journal	August 2001
Double Reduction of Plastoquinone to Plastoquinol in Photosystem 1 McConnell, Michael D.; Cowgill, John B.; Baker, Patricia L. Biochemistry, Vol. 50, Issue 51 https://doi.org/10.1021/bi201131r	journal	December 2011
In Vivo Analysis of the Electron Transfer within Photosystem I: Are the Two Phylloquinones Involved? ^† Joliot, Pierre; Joliot, Anne Biochemistry, Vol. 38, Issue 34 https://doi.org/10.1021/bi990857c	journal	August 1999
FTIR Spectroscopy of UV-Generated Quinone Radicals: Evidence for an Intramolecular Hydrogen Atom Transfer in Ubiquinone, Naphthoquinone, and Plastoquinone Burie, Jean-Rene; Boussac, Alain; Boullais, Claude The Journal of Physical Chemistry, Vol. 99, Issue 12 https://doi.org/10.1021/j100012a029	journal	March 1995
Asymmetric Hydrogen-Bonding of the Quinone Cofactor in Photosystem I Probed by ¹³ C-Labeled Naphthoquinones ^† Pushkar, Yulia N.; Golbeck, John H.; Stehlik, Dietmar The Journal of Physical Chemistry B, Vol. 108, Issue 27 https://doi.org/10.1021/jp0361879	journal	July 2004
On the Nature of the Hydrogen Bonds to Neutral Ubiquinone in the Q _A Binding Site in Purple Bacterial Photosynthetic Reaction Centers Zhao, Nan; Hastings, Gary The Journal of Physical Chemistry B, Vol. 117, Issue 29 https://doi.org/10.1021/jp403833y	journal	July 2013
Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution Jordan, Patrick; Fromme, Petra; Witt, Horst Tobias Nature, Vol. 411, Issue 6840 https://doi.org/10.1038/35082000	journal	June 2001
Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å Umena, Yasufumi; Kawakami, Keisuke; Shen, Jian-Ren Nature, Vol. 473, Issue 7345 https://doi.org/10.1038/nature09913	journal	April 2011
Incorporation of a high potential quinone reveals that electron transfer in Photosystem I becomes highly asymmetric at low temperature Mula, Sam; Savitsky, Anton; Möbius, Klaus Photochemical & Photobiological Sciences, Vol. 11, Issue 6 https://doi.org/10.1039/c2pp05340c	journal	January 2012
Effects of hydrogen bonding interactions on the redox potential and molecular vibrations of plastoquinone as studied using density functional theory calculations Ashizawa, Ryota; Noguchi, Takumi Physical Chemistry Chemical Physics, Vol. 16, Issue 24 https://doi.org/10.1039/c3cp54742f	journal	January 2014
Evidence for two active branches for electron transfer in photosystem I Guergova-Kuras, M.; Boudreaux, B.; Joliot, A. Proceedings of the National Academy of Sciences, Vol. 98, Issue 8 https://doi.org/10.1073/pnas.081078898	journal	March 2001
Calculated vibrational properties of pigments in protein binding sites Lamichhane, H. P.; Hastings, G. Proceedings of the National Academy of Sciences, Vol. 108, Issue 26 https://doi.org/10.1073/pnas.1104046108	journal	June 2011
Efficient exchange of the primary quinone acceptor QA in isolated reaction centers of Rhodopseudomonas viridis Breton, J. Proceedings of the National Academy of Sciences, Vol. 94, Issue 21 https://doi.org/10.1073/pnas.94.21.11318	journal	October 1997
Recruitment of a Foreign Quinone into the A ₁ Site of Photosystem I : I. GENETIC AND PHYSIOLOGICAL CHARACTERIZATION OF PHYLLOQUINONE BIOSYNTHETIC PATHWAY MUTANTS IN Johnson, T. Wade; Shen, Gaozhong; Zybailov, Boris Journal of Biological Chemistry, Vol. 275, Issue 12 https://doi.org/10.1074/jbc.275.12.8523	journal	March 2000
Recruitment of a Foreign Quinone into the A ₁ Site of Photosystem I : II. STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF PHYLLOQUINONE BIOSYNTHETIC PATHWAY MUTANTS BY ELECTRON PARAMAGNETIC RESONANCE AND ELECTRON-NUCLEAR DOUBLE RESONANCE SPECTROSCOPY Zybailov, Boris; van der Est, Art; Zech, Stephan G. Journal of Biological Chemistry, Vol. 275, Issue 12 https://doi.org/10.1074/jbc.275.12.8531	journal	March 2000
Recruitment of a Foreign Quinone into the A ₁ Site of Photosystem I : ALTERED KINETICS OF ELECTRON TRANSFER IN PHYLLOQUINONE BIOSYNTHETIC PATHWAY MUTANTS STUDIED BY TIME-RESOLVED OPTICAL, EPR, AND ELECTROMETRIC TECHNIQUES Semenov, Alexey Yu.; Vassiliev, Ilya R.; van der Est, Art Journal of Biological Chemistry, Vol. 275, Issue 31 https://doi.org/10.1074/jbc.M000508200	journal	May 2000
Time-Resolved FTIR Difference Spectroscopy in Combination with Specific Isotope Labeling for the Study of A1, the Secondary Electron Acceptor in Photosystem 1 Hastings, Gary; Priyangika Bandaranayake, K. M.; Carrion, Enrique Biophysical Journal, Vol. 94, Issue 11 https://doi.org/10.1529/biophysj.107.113191	journal	June 2008
Glotaran : A Java -Based Graphical User Interface for the R Package TIMP Snellenburg, Joris J.; Laptenok, Sergey P.; Seger, Ralf Journal of Statistical Software, Vol. 49, Issue 3 https://doi.org/10.18637/jss.v049.i03	journal	January 2012
Comparison of calculated and experimental isotope edited FTIR difference spectra for purple bacterial photosynthetic reaction centers with different quinones incorporated into the QA binding site Zhao, Nan; Lamichhane, Hari P.; Hastings, Gary Frontiers in Plant Science, Vol. 4 https://doi.org/10.3389/fpls.2013.00328	journal	January 2013

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