skip to main content
DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Complete Genome Sequences of Cellvibrio japonicus Strains with Improved Growth When Using α-Diglucosides

Abstract

Cellvibrio japonicus is a saprophytic bacterium that has been studied for its substantial carbohydrate degradation capability. We announce the genome sequences of three strains with improved growth characteristics when utilizing α-diglucosides. These data provide additional insight into the metabolic flexibility of a biotechnologically relevant bacterium.

Authors:
; ; ORCiD logo;
Publication Date:
Research Org.:
Univ. of Maryland Baltimore County (UMBC), Baltimore, MD (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
OSTI Identifier:
1572430
Alternate Identifier(s):
OSTI ID: 1602748
Grant/Contract Number:  
SC0014183
Resource Type:
Published Article
Journal Name:
Microbiology Resource Announcements
Additional Journal Information:
Journal Name: Microbiology Resource Announcements Journal Volume: 8 Journal Issue: 44; Journal ID: ISSN 2576-098X
Publisher:
SSPA - American Society for Microbiology
Country of Publication:
United States
Language:
English
Subject:
60 APPLIED LIFE SCIENCES

Citation Formats

Garcia, Cecelia A., Narrett, Jackson A., Gardner, Jeffrey G., and Cameron Thrash, J. Complete Genome Sequences of Cellvibrio japonicus Strains with Improved Growth When Using α-Diglucosides. United States: N. p., 2019. Web. doi:10.1128/MRA.01077-19.
Garcia, Cecelia A., Narrett, Jackson A., Gardner, Jeffrey G., & Cameron Thrash, J. Complete Genome Sequences of Cellvibrio japonicus Strains with Improved Growth When Using α-Diglucosides. United States. doi:10.1128/MRA.01077-19.
Garcia, Cecelia A., Narrett, Jackson A., Gardner, Jeffrey G., and Cameron Thrash, J. Thu . "Complete Genome Sequences of Cellvibrio japonicus Strains with Improved Growth When Using α-Diglucosides". United States. doi:10.1128/MRA.01077-19.
@article{osti_1572430,
title = {Complete Genome Sequences of Cellvibrio japonicus Strains with Improved Growth When Using α-Diglucosides},
author = {Garcia, Cecelia A. and Narrett, Jackson A. and Gardner, Jeffrey G. and Cameron Thrash, J.},
abstractNote = {Cellvibrio japonicus is a saprophytic bacterium that has been studied for its substantial carbohydrate degradation capability. We announce the genome sequences of three strains with improved growth characteristics when utilizing α-diglucosides. These data provide additional insight into the metabolic flexibility of a biotechnologically relevant bacterium.},
doi = {10.1128/MRA.01077-19},
journal = {Microbiology Resource Announcements},
number = 44,
volume = 8,
place = {United States},
year = {2019},
month = {10}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
DOI: 10.1128/MRA.01077-19

Save / Share:

Works referenced in this record:

In-Frame Deletions Allow Functional Characterization of Complex Cellulose Degradation Phenotypes in Cellvibrio japonicus
journal, June 2015

  • Nelson, Cassandra E.; Gardner, Jeffrey G.
  • Applied and Environmental Microbiology, Vol. 81, Issue 17
  • DOI: 10.1128/AEM.00847-15

Quantification of massively parallel sequencing libraries – a comparative study of eight methods
journal, January 2018

  • Hussing, Christian; Kampmann, Marie-Louise; Mogensen, Helle Smidt
  • Scientific Reports, Vol. 8, Issue 1
  • DOI: 10.1038/s41598-018-19574-w

The complex physiology of Cellvibrio japonicus xylan degradation relies on a single cytoplasmic β-xylosidase for xylo-oligosaccharide utilization : Xylan degradation in
journal, January 2018

  • Blake, Andrew D.; Beri, Nina R.; Guttman, Hadassa S.
  • Molecular Microbiology, Vol. 107, Issue 5
  • DOI: 10.1111/mmi.13903

Systems analysis in Cellvibrio japonicus resolves predicted redundancy of β-glucosidases and determines essential physiological functions : Functional analysis of
journal, February 2017

  • Nelson, Cassandra E.; Rogowski, Artur; Morland, Carl
  • Molecular Microbiology, Vol. 104, Issue 2
  • DOI: 10.1111/mmi.13625

NCBI prokaryotic genome annotation pipeline
journal, June 2016

  • Tatusova, Tatiana; DiCuccio, Michael; Badretdin, Azat
  • Nucleic Acids Research, Vol. 44, Issue 14
  • DOI: 10.1093/nar/gkw569

Systems analysis of the glycoside hydrolase family 18 enzymes from Cellvibrio japonicus characterizes essential chitin degradation functions
journal, January 2018

  • Monge, Estela C.; Tuveng, Tina R.; Vaaje-Kolstad, Gustav
  • Journal of Biological Chemistry, Vol. 293, Issue 10
  • DOI: 10.1074/jbc.RA117.000849

Characterization of the cellulose-degrading bacterium NCIMB 10462
journal, September 1995

  • Dees, C.; Ringelberg, D.; Scott, T. C.
  • Applied Biochemistry and Biotechnology, Vol. 51-52, Issue 1
  • DOI: 10.1007/BF02933429

The carbohydrate-active enzymes database (CAZy) in 2013
journal, November 2013

  • Lombard, Vincent; Golaconda Ramulu, Hemalatha; Drula, Elodie
  • Nucleic Acids Research, Vol. 42, Issue D1
  • DOI: 10.1093/nar/gkt1178

Insights into Plant Cell Wall Degradation from the Genome Sequence of the Soil Bacterium Cellvibrio japonicus
journal, June 2008

  • DeBoy, R. T.; Mongodin, E. F.; Fouts, D. E.
  • Journal of Bacteriology, Vol. 190, Issue 15, p. 5455-5463
  • DOI: 10.1128/JB.01701-07

Polysaccharide degradation systems of the saprophytic bacterium Cellvibrio japonicus
journal, June 2016


In vitro and in vivo characterization of three Cellvibrio japonicus glycoside hydrolase family 5 members reveals potent xyloglucan backbone-cleaving functions
journal, February 2018

  • Attia, Mohamed A.; Nelson, Cassandra E.; Offen, Wendy A.
  • Biotechnology for Biofuels, Vol. 11, Issue 1
  • DOI: 10.1186/s13068-018-1039-6

Studies on the Aerobic Mesophilic Cellulose-decomposing Bacteria [好氣性中温性纎維素醗酵菌に關する研究]
journal, January 1952

  • Ueda, Kiyomoto; Ishikawa, Shichiro; Itami, Turu
  • Journal of the agricultural chemical society of Japan, Vol. 26, Issue 1
  • DOI: 10.1271/nogeikagaku1924.26.35