skip to main content
DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Nonparametric empirical Bayesian framework for fluorescence-lifetime imaging microscopy

Authors:
ORCiD logo; ; ; ORCiD logo;
Publication Date:
Sponsoring Org.:
USDOE
OSTI Identifier:
1569103
Grant/Contract Number:  
SC0019013
Resource Type:
Published Article
Journal Name:
Biomedical Optics Express
Additional Journal Information:
Journal Name: Biomedical Optics Express Journal Volume: 10 Journal Issue: 11; Journal ID: ISSN 2156-7085
Publisher:
Optical Society of America
Country of Publication:
United States
Language:
English

Citation Formats

Wang, Shulei, Chacko, Jenu V., Sagar, Abdul K., Eliceiri, Kevin W., and Yuan, Ming. Nonparametric empirical Bayesian framework for fluorescence-lifetime imaging microscopy. United States: N. p., 2019. Web. doi:10.1364/BOE.10.005497.
Wang, Shulei, Chacko, Jenu V., Sagar, Abdul K., Eliceiri, Kevin W., & Yuan, Ming. Nonparametric empirical Bayesian framework for fluorescence-lifetime imaging microscopy. United States. doi:10.1364/BOE.10.005497.
Wang, Shulei, Chacko, Jenu V., Sagar, Abdul K., Eliceiri, Kevin W., and Yuan, Ming. Thu . "Nonparametric empirical Bayesian framework for fluorescence-lifetime imaging microscopy". United States. doi:10.1364/BOE.10.005497.
@article{osti_1569103,
title = {Nonparametric empirical Bayesian framework for fluorescence-lifetime imaging microscopy},
author = {Wang, Shulei and Chacko, Jenu V. and Sagar, Abdul K. and Eliceiri, Kevin W. and Yuan, Ming},
abstractNote = {},
doi = {10.1364/BOE.10.005497},
journal = {Biomedical Optics Express},
number = 11,
volume = 10,
place = {United States},
year = {2019},
month = {10}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
DOI: 10.1364/BOE.10.005497

Save / Share:

Works referenced in this record:

Convex Optimization, Shape Constraints, Compound Decisions, and Empirical Bayes Rules
journal, April 2014


Global and pixel kinetic data analysis for FRET detection by multi-photon time-domain FLIM
conference, March 2005

  • Barber, Paul R.; Ameer-Beg, Simon M.; Gilbey, Julian D.
  • Biomedical Optics 2005, SPIE Proceedings
  • DOI: 10.1117/12.590510

Compound decision theory and empirical Bayes methods: invited paper
journal, April 2003


Metabolic Mapping of MCF10A Human Breast Cells via Multiphoton Fluorescence Lifetime Imaging of the Coenzyme NADH
journal, October 2005


Evaluation of global analysis algorithms for single frequency fluorescence lifetime imaging microscopy data
journal, January 2003


Automated High-Throughput Fluorescence Lifetime Imaging Microscopy to Detect Protein–Protein Interactions
journal, April 2016

  • Guzmán, Camilo; Oetken-Lindholm, Christina; Abankwa, Daniel
  • Journal of Laboratory Automation, Vol. 21, Issue 2
  • DOI: 10.1177/2211068215606048

The Geometry of Mixture Likelihoods: A General Theory
journal, March 1983


Bayesian analysis of fluorescence lifetime imaging data
conference, February 2011

  • Rowley, Mark I.; Barber, Paul R.; Coolen, Anthony C. C.
  • SPIE BiOS, SPIE Proceedings
  • DOI: 10.1117/12.873890

Developing and Testing a Bayesian Analysis of Fluorescence Lifetime Measurements
journal, January 2017


The Bernstein-Von-Mises theorem under misspecification
journal, January 2012

  • Kleijn, B. J. K.; van der Vaart, A. W.
  • Electronic Journal of Statistics, Vol. 6, Issue 0
  • DOI: 10.1214/12-EJS675

Photon Counting Data Analysis: Application of the Maximum Likelihood and Related Methods for the Determination of Lifetimes in Mixtures of Rose Bengal and Rhodamine B
journal, December 2016

  • Santra, Kalyan; Smith, Emily A.; Petrich, Jacob W.
  • The Journal of Physical Chemistry A, Vol. 121, Issue 1
  • DOI: 10.1021/acs.jpca.6b10728

Consistency of the Maximum Likelihood Estimator in the Presence of Infinitely Many Incidental Parameters
journal, December 1956


In vivo multiphoton fluorescence lifetime imaging of protein-bound and free nicotinamide adenine dinucleotide in normal and precancerous epithelia
journal, January 2007

  • Skala, Melissa C.; Riching, Kristin M.; Bird, Damian K.
  • Journal of Biomedical Optics, Vol. 12, Issue 2
  • DOI: 10.1117/1.2717503

An Experimental Comparison of the Maximum Likelihood Estimation and Nonlinear Least-Squares Fluorescence Lifetime Analysis of Single Molecules
journal, May 2001

  • Maus, Michael; Cotlet, Mircea; Hofkens, Johan
  • Analytical Chemistry, Vol. 73, Issue 9
  • DOI: 10.1021/ac000877g

Simple and Globally Convergent Methods for Accelerating the Convergence of Any EM Algorithm
journal, June 2008


Optical Metabolic Imaging Identifies Glycolytic Levels, Subtypes, and Early-Treatment Response in Breast Cancer
journal, October 2013


A Bayesian method for single molecule, fluorescence burst analysis
journal, January 2010

  • Barber, P. R.; Ameer-Beg, S. M.; Pathmananthan, S.
  • Biomedical Optics Express, Vol. 1, Issue 4
  • DOI: 10.1364/BOE.1.001148

How many photons are necessary for fluorescence-lifetime measurements?
journal, November 1992


Rapid Global Fitting of Large Fluorescence Lifetime Imaging Microscopy Datasets
journal, August 2013


General maximum likelihood empirical Bayes estimation of normal means
journal, August 2009

  • Jiang, Wenhua; Zhang, Cun-Hui
  • The Annals of Statistics, Vol. 37, Issue 4
  • DOI: 10.1214/08-AOS638

Fluorescent Protein Based FRET Pairs with Improved Dynamic Range for Fluorescence Lifetime Measurements
journal, August 2015


A Fast Global Fitting Algorithm for Fluorescence Lifetime Imaging Microscopy Based on Image Segmentation
journal, October 2004


Robust Bayesian Fluorescence Lifetime Estimation, Decay Model Selection and Instrument Response Determination for Low-Intensity FLIM Imaging
journal, June 2016


05 billion events per second time correlated single photon counting using CMOS SPAD arrays
journal, January 2015

  • Krstajić, Nikola; Poland, Simon; Levitt, James
  • Optics Letters, Vol. 40, Issue 18
  • DOI: 10.1364/OL.40.004305

Two Modeling Strategies for Empirical Bayes Estimation
journal, May 2014


siFLIM: single-image frequency-domain FLIM provides fast and photon-efficient lifetime data
journal, April 2016

  • Raspe, Marcel; Kedziora, Katarzyna M.; van den Broek, Bram
  • Nature Methods, Vol. 13, Issue 6
  • DOI: 10.1038/nmeth.3836

Accurate Analysis of Fluorescence Decays from Single Molecules in Photon Counting Experiments
journal, August 2003

  • Turton, David A.; Reid, Gavin D.; Beddard, Godfrey S.
  • Analytical Chemistry, Vol. 75, Issue 16
  • DOI: 10.1021/ac034325k

Penalized maximum likelihood estimation of lifetime and amplitude images from multi-exponentially decaying fluorescence signals
journal, January 2013

  • Kim, Jeongtae; Seok, Jiyeong; Lee, Hwiin
  • Optics Express, Vol. 21, Issue 17
  • DOI: 10.1364/OE.21.020240