Nitric oxide is an obligate bacterial nitrification intermediate produced by hydroxylamine oxidoreductase
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journal
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July 2017 |
Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira
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journal
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March 2018 |
Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters
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journal
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March 2016 |
UniProt: the universal protein knowledgebase
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journal
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November 2016 |
Cyanate as an energy source for nitrifiers
|
journal
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July 2015 |
Shifting the genomic gold standard for the prokaryotic species definition
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journal
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October 2009 |
ATP Hydrolysis and Synthesis of a Rotary Motor V-ATPase from Thermus thermophilus
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journal
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May 2008 |
Enterococcus hirae vacuolar ATPase is expressed in response to pH as well as sodium
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journal
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July 1999 |
The Genome of Nitrospina gracilis Illuminates the Metabolism and Evolution of the Major Marine Nitrite Oxidizer
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journal
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January 2013 |
Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation
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journal
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August 2014 |
genoPlotR: comparative gene and genome visualization in R
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journal
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July 2010 |
UniRef: comprehensive and non-redundant UniProt reference clusters
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journal
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March 2007 |
Interactions between Thaumarchaea, Nitrospira and methanotrophs modulate autotrophic nitrification in volcanic grassland soil
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journal
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May 2014 |
The 1.3-A resolution structure of Nitrosomonas europaea Rh50 and mechanistic implications for NH3 transport by Rhesus family proteins
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journal
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November 2007 |
SignalP 4.0: discriminating signal peptides from transmembrane regions
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journal
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September 2011 |
Metalloenzyme nitrile hydratase: Structure, regulation, and application to biotechnology
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journal
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August 1998 |
Characterization of Hydrogenase II from the Hyperthermophilic Archaeon Pyrococcus furiosus and Assessment of Its Role in Sulfur Reduction
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journal
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April 2000 |
Freshwater Recirculating Aquaculture System Operations Drive Biofilter Bacterial Community Shifts around a Stable Nitrifying Consortium of Ammonia-Oxidizing Archaea and Comammox Nitrospira
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journal
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January 2017 |
Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations
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journal
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October 2017 |
Metagenomic Evidence for the Presence of Comammox Nitrospira -Like Bacteria in a Drinking Water System
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journal
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November 2015 |
A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria
|
journal
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July 2010 |
Prodigal: prokaryotic gene recognition and translation initiation site identification
|
journal
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March 2010 |
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
|
journal
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January 2015 |
Niche separation of comammox Nitrospira and canonical ammonia oxidizers in an acidic subtropical forest soil under long-term nitrogen deposition
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journal
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November 2018 |
Nitrile Hydratase and Amidase from Rhodococcus rhodochrous Hydrolyze Acrylic Fibers and Granular Polyacrylonitriles
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journal
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April 2000 |
In Situ Characterization of Nitrospira-Like Nitrite-Oxidizing Bacteria Active in Wastewater Treatment Plants
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journal
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November 2001 |
NADH:ferredoxin reductase and NAD-reducing hydrogenase activities in Hydrogenobacter thermophilus strain TK-6
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journal
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June 1996 |
An obligately aerobic soil bacterium activates fermentative hydrogen production to survive reductive stress during hypoxia
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journal
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July 2014 |
Functionally relevant diversity of closely related Nitrospira in activated sludge
|
journal
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August 2014 |
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
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journal
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May 2015 |
Author Correction: Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
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journal
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December 2017 |
The SLC26 gene family of anion transporters and channels
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journal
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April 2013 |
Aquifer environment selects for microbial species cohorts in sediment and groundwater
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journal
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February 2015 |
KEGG: Kyoto Encyclopedia of Genes and Genomes
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journal
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January 1999 |
UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction
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journal
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February 2018 |
A Combined Transmembrane Topology and Signal Peptide Prediction Method
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journal
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May 2004 |
Variability of the transporter gene complement in ammonia-oxidizing archaea
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journal
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December 2014 |
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy
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journal
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May 2018 |
The AmiE aliphatic amidase and AmiF formamidase of Helicobacter pylori: natural evolution of two enzyme paralogues: Study of the two paralogous amidases of H. pylori
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journal
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May 2001 |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
|
journal
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January 2014 |
Transformation of the Nitrogen Cycle: Recent Trends, Questions, and Potential Solutions
|
journal
|
May 2008 |
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
|
journal
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April 2012 |
Prokka: rapid prokaryotic genome annotation
|
journal
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March 2014 |
Genomic Analysis of Two Phylogenetically Distinct Nitrospira Species Reveals Their Genomic Plasticity and Functional Diversity
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journal
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January 2018 |
Complete nitrification by Nitrospira bacteria
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journal
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November 2015 |
Why is metabolic labour divided in nitrification?
|
journal
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May 2006 |
Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira
|
journal
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August 2015 |
Unusual biology across a group comprising more than 15% of domain Bacteria
|
journal
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June 2015 |
Isolation and characterization of a moderately thermophilic nitrite-oxidizing bacterium from a geothermal spring: Moderately thermophilic Nitrospira-cultures from hot springs
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journal
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December 2010 |
Binning metagenomic contigs by coverage and composition
|
journal
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September 2014 |
Connecting stalks in V-type ATPase
|
journal
|
September 1999 |
A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria
|
journal
|
September 2016 |
Complete nitrification by a single microorganism
|
journal
|
November 2015 |
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
|
journal
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November 2015 |
AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment
|
journal
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August 2017 |
Fast gapped-read alignment with Bowtie 2
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journal
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March 2012 |
Creating the CIPRES Science Gateway for inference of large phylogenetic trees
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conference
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November 2010 |
Diversification and niche adaptations of Nitrospina-like bacteria in the polyextreme interfaces of Red Sea brines
|
journal
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December 2015 |
Basic local alignment search tool
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journal
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October 1990 |
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
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journal
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March 2016 |
SODa: An Mn/Fe superoxide dismutase prediction and design server
|
journal
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January 2008 |
Complete nitrification: insights into the ecophysiology of comammox Nitrospira
|
journal
|
November 2018 |
Molecular aspects of bacterial pH sensing and homeostasis
|
journal
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April 2011 |
Comammox in drinking water systems
|
journal
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June 2017 |
Year-Round Shotgun Metagenomes Reveal Stable Microbial Communities in Agricultural Soils and Novel Ammonia Oxidizers Responding to Fertilization
|
journal
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November 2017 |
Periplasmic copper-zinc superoxide dismutase of Legionella pneumophila: role in stationary-phase survival.
|
journal
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March 1996 |
A large-scale evaluation of algorithms to calculate average nucleotide identity
|
journal
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February 2017 |
Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system
|
journal
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October 2016 |
Ubiquity and Diversity of Complete Ammonia Oxidizers (Comammox)
|
journal
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October 2018 |
Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment
|
journal
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August 2013 |
Comammox—a newly discovered nitrification process in the terrestrial nitrogen cycle
|
journal
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October 2017 |
Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle
|
journal
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August 2017 |
Lysobacter telluris sp. nov., isolated from Korean rhizosphere soil
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journal
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September 2020 |
An SHR–SCR module specifies legume cortical cell fate to enable nodulation
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journal
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December 2020 |
UniProt: the Universal Protein knowledgebase
|
journal
|
January 2004 |
Draft Genome Sequence of Comamonas aquatilis Strain LK (= CSUR P6418 = CECT 9772), Isolated from the Planarian Schmidtea mediterranea
|
journal
|
February 2021 |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
|
text
|
January 2014 |
UniProt: the universal protein knowledgebase
|
journal
|
February 2018 |
Complete nitrification by a single microorganism
|
audiovisual
|
January 2021 |
Complete nitrification: insights into the ecophysiology of comammox Nitrospira
|
journal
|
November 2018 |
A large-scale evaluation of algorithms to calculate average nucleotide identity
|
journal
|
February 2017 |
UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction
|
journal
|
February 2018 |
A Combined Transmembrane Topology and Signal Peptide Prediction Method
|
journal
|
May 2004 |
The SLC26 gene family of anion transporters and channels
|
journal
|
April 2013 |
Why is metabolic labour divided in nitrification?
|
journal
|
May 2006 |
Variability of the transporter gene complement in ammonia-oxidizing archaea
|
journal
|
December 2014 |
A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria
|
journal
|
September 2016 |
Comammox in drinking water systems
|
journal
|
June 2017 |
Connecting stalks in V-type ATPase
|
journal
|
September 1999 |
Functionally relevant diversity of closely related Nitrospira in activated sludge
|
journal
|
August 2014 |
Aquifer environment selects for microbial species cohorts in sediment and groundwater
|
journal
|
February 2015 |
Diversification and niche adaptations of Nitrospina-like bacteria in the polyextreme interfaces of Red Sea brines
|
journal
|
December 2015 |
Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters
|
journal
|
March 2016 |
Unusual biology across a group comprising more than 15% of domain Bacteria
|
journal
|
June 2015 |
Cyanate as an energy source for nitrifiers
|
journal
|
July 2015 |
Complete nitrification by a single microorganism
|
journal
|
November 2015 |
Complete nitrification by Nitrospira bacteria
|
journal
|
November 2015 |
SignalP 4.0: discriminating signal peptides from transmembrane regions
|
journal
|
September 2011 |
Molecular aspects of bacterial pH sensing and homeostasis
|
journal
|
April 2011 |
Shifting the genomic gold standard for the prokaryotic species definition
|
journal
|
October 2009 |
A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria
|
journal
|
July 2010 |
An obligately aerobic soil bacterium activates fermentative hydrogen production to survive reductive stress during hypoxia
|
journal
|
July 2014 |
UniRef: comprehensive and non-redundant UniProt reference clusters
|
journal
|
March 2007 |
genoPlotR: comparative gene and genome visualization in R
|
journal
|
July 2010 |
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
|
journal
|
April 2012 |
Prokka: rapid prokaryotic genome annotation
|
journal
|
March 2014 |
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
|
journal
|
March 2016 |
KEGG: Kyoto Encyclopedia of Genes and Genomes
|
journal
|
January 1999 |
Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
|
journal
|
November 2015 |
UniProt: the universal protein knowledgebase
|
journal
|
November 2016 |
Transformation of the Nitrogen Cycle: Recent Trends, Questions, and Potential Solutions
|
journal
|
May 2008 |
Periplasmic copper-zinc superoxide dismutase of Legionella pneumophila: role in stationary-phase survival.
|
journal
|
March 1996 |
Prodigal: prokaryotic gene recognition and translation initiation site identification
|
journal
|
March 2010 |
SODa: An Mn/Fe superoxide dismutase prediction and design server
|
journal
|
January 2008 |
Freshwater Recirculating Aquaculture System Operations Drive Biofilter Bacterial Community Shifts around a Stable Nitrifying Consortium of Ammonia-Oxidizing Archaea and Comammox Nitrospira
|
journal
|
January 2017 |
AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment
|
journal
|
August 2017 |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
|
text
|
January 2014 |
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
|
journal
|
January 2015 |