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Title: Target highlights in CASP13: Experimental target structures through the eyes of their authors

Abstract

The functional and biological significance of selected CASP13 targets are described by the authors of the structures. The structural biologists discuss the most interesting structural features of the target proteins and assess whether these features were correctly reproduced in the predictions submitted to the CASP13 experiment.

Authors:
ORCiD logo [1]; ORCiD logo [2];  [3];  [4];  [3];  [5];  [6];  [7];  [8];  [9];  [10];  [11]; ORCiD logo [2];  [12];  [9];  [13];  [14];  [4]; ORCiD logo [15];  [16] more »;  [17];  [18];  [14];  [3];  [19];  [20];  [21];  [22];  [8];  [6];  [20];  [23];  [24];  [25]; ORCiD logo [26] « less
+ Show Author Affiliations
  1. BSC‐CNS Barcelona Supercomputing Center, Barcelona (Spain)
  2. Univ. of California, Davis, CA (United States)
  3. National Renewable Energy Lab. (NREL), Golden, CO (United States)
  4. Max Planck Inst. for Developmental Biology, Tübingen (Germany)
  5. Univ. of Oxford (United Kingdom); Univ. of Bristol (United Kingdom)
  6. Univ. of Oxford (United Kingdom)
  7. Univ. of Windsor, ON (Canada)
  8. Univ. of Houston, TX (United States); Univ. of Wisconsin, Madison, WI (United States)
  9. Newcastle Univ., Newcastle upon Tyne (United Kingdom)
  10. Univ. of Auckland (Australia); Univ. Grenoble Alpes (France)
  11. Nutrition and Health, Zurich (Switzerland)
  12. Univ. of California, Irvine, CA (United States)
  13. Univ. Grenoble Alpes (France)
  14. Univ. of Birmingham (United Kingdom)
  15. Univ. of California, Santa Barbara, CA (United States)
  16. Midwest Center for Structural Genomics, Argonne, IL (United States); Univ. of Chicago, IL (United States)
  17. Univ. of Texas Medical Branch, Galveston, TX (United States)
  18. Univ. of Toronto, ON (Canada)
  19. Midwest Center for Structural Genomics, Argonne, IL (United States)
  20. Univ. of Chicago, IL (United States)
  21. Univ. of Auckland (Australia)
  22. Univ. of Maryland, Rockville, MD (United States)
  23. Univ. of Windsor, ON (Canada); Univ. of Toronto, ON (Canada)
  24. Univ. College London (United Kingdom)
  25. Michigan State Univ., East Lansing, MI (United States)
  26. Univ. of Basel (Switzerland)
Publication Date:
Research Org.:
National Renewable Energy Lab. (NREL), Golden, CO (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
OSTI Identifier:
1559927
Report Number(s):
NREL/JA-2700-74703
Journal ID: ISSN 0887-3585
Grant/Contract Number:  
AC36-08GO28308
Resource Type:
Accepted Manuscript
Journal Name:
Proteins
Additional Journal Information:
Journal Name: Proteins; Journal ID: ISSN 0887-3585
Publisher:
Wiley
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; CASP; protein structure prediction; cryo-EM; X-ray crystallography

Citation Formats

Lepore, Rosalba, Kryshtafovych, Andriy, Alahuhta, Markus, Veraszto, Harshul A., Bomble, Yannick J., Bufton, Joshua C., Bullock, Alex N., Caba, Cody, Cao, Hongnan, Davies, Owen R., Desfosses, Ambroise, Dunne, Matthew, Fidelis, Krzysztof, Goulding, Celia W., Gurusaran, Manickam, Gutsche, Irina, Harding, Christopher J., Hartmann, Marcus D., Hayes, Christopher S., Joachimiak, Andrzej, Leiman, Petr G., Loppnau, Peter, Lovering, Andrew L., Lunin, Vladimir V., Michalska, Karolina, Mir‐Sanchis, Ignacio, Mitra, Alok, Moult, John, Phillips Jr, George N., Pinkas, Daniel M., Rice, Phoebe A., Tong, Yufeng, Topf, Maya, Walton, Jonathan D., and Schwede, Torsten. Target highlights in CASP13: Experimental target structures through the eyes of their authors. United States: N. p., 2019. Web. doi:10.1002/prot.25805.
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Lepore, Rosalba, Kryshtafovych, Andriy, Alahuhta, Markus, Veraszto, Harshul A., Bomble, Yannick J., Bufton, Joshua C., Bullock, Alex N., Caba, Cody, Cao, Hongnan, Davies, Owen R., Desfosses, Ambroise, Dunne, Matthew, Fidelis, Krzysztof, Goulding, Celia W., Gurusaran, Manickam, Gutsche, Irina, Harding, Christopher J., Hartmann, Marcus D., Hayes, Christopher S., Joachimiak, Andrzej, Leiman, Petr G., Loppnau, Peter, Lovering, Andrew L., Lunin, Vladimir V., Michalska, Karolina, Mir‐Sanchis, Ignacio, Mitra, Alok, Moult, John, Phillips Jr, George N., Pinkas, Daniel M., Rice, Phoebe A., Tong, Yufeng, Topf, Maya, Walton, Jonathan D., & Schwede, Torsten. Target highlights in CASP13: Experimental target structures through the eyes of their authors. United States. doi:10.1002/prot.25805.
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Lepore, Rosalba, Kryshtafovych, Andriy, Alahuhta, Markus, Veraszto, Harshul A., Bomble, Yannick J., Bufton, Joshua C., Bullock, Alex N., Caba, Cody, Cao, Hongnan, Davies, Owen R., Desfosses, Ambroise, Dunne, Matthew, Fidelis, Krzysztof, Goulding, Celia W., Gurusaran, Manickam, Gutsche, Irina, Harding, Christopher J., Hartmann, Marcus D., Hayes, Christopher S., Joachimiak, Andrzej, Leiman, Petr G., Loppnau, Peter, Lovering, Andrew L., Lunin, Vladimir V., Michalska, Karolina, Mir‐Sanchis, Ignacio, Mitra, Alok, Moult, John, Phillips Jr, George N., Pinkas, Daniel M., Rice, Phoebe A., Tong, Yufeng, Topf, Maya, Walton, Jonathan D., and Schwede, Torsten. Fri . "Target highlights in CASP13: Experimental target structures through the eyes of their authors". United States. doi:10.1002/prot.25805. https://www.osti.gov/servlets/purl/1559927.
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@article{osti_1559927,
title = {Target highlights in CASP13: Experimental target structures through the eyes of their authors},
author = {Lepore, Rosalba and Kryshtafovych, Andriy and Alahuhta, Markus and Veraszto, Harshul A. and Bomble, Yannick J. and Bufton, Joshua C. and Bullock, Alex N. and Caba, Cody and Cao, Hongnan and Davies, Owen R. and Desfosses, Ambroise and Dunne, Matthew and Fidelis, Krzysztof and Goulding, Celia W. and Gurusaran, Manickam and Gutsche, Irina and Harding, Christopher J. and Hartmann, Marcus D. and Hayes, Christopher S. and Joachimiak, Andrzej and Leiman, Petr G. and Loppnau, Peter and Lovering, Andrew L. and Lunin, Vladimir V. and Michalska, Karolina and Mir‐Sanchis, Ignacio and Mitra, Alok and Moult, John and Phillips Jr, George N. and Pinkas, Daniel M. and Rice, Phoebe A. and Tong, Yufeng and Topf, Maya and Walton, Jonathan D. and Schwede, Torsten},
abstractNote = {The functional and biological significance of selected CASP13 targets are described by the authors of the structures. The structural biologists discuss the most interesting structural features of the target proteins and assess whether these features were correctly reproduced in the predictions submitted to the CASP13 experiment.},
doi = {10.1002/prot.25805},
journal = {Proteins},
number = ,
volume = ,
place = {United States},
year = {2019},
month = {8}
}
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DOI:  10.1002/prot.25805
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Works referenced in this record:

CRISPR/Cas System and Its Role in Phage-Bacteria Interactions
journal, October 2010

An Extended Cyclic Di-GMP Network in the Predatory Bacterium Bdellovibrio bacteriovorus
journal, August 2015

  • Rotem, Or; Nesper, Jutta; Borovok, Ilya
  • Journal of Bacteriology, Vol. 198, Issue 1
  • DOI: 10.1128/JB.00422-15

The TRF1-binding protein TERB1 promotes chromosome movement and telomere rigidity in meiosis
journal, January 2014

  • Shibuya, Hiroki; Ishiguro, Kei-ichiro; Watanabe, Yoshinori
  • Nature Cell Biology, Vol. 16, Issue 2
  • DOI: 10.1038/ncb2896

A rare polyglycine type II-like helix motif in naturally occurring proteins
journal, August 2017

  • Warkentin, Eberhard; Weidenweber, Sina; Schühle, Karola
  • Proteins: Structure, Function, and Bioinformatics, Vol. 85, Issue 11
  • DOI: 10.1002/prot.25355

Discrete Cyclic di-GMP-Dependent Control of Bacterial Predation versus Axenic Growth in Bdellovibrio bacteriovorus
journal, February 2012

Independent Functions of Viral Protein and Nucleic acid in Growth of Bacteriophage
journal, September 1952

The gp38 Adhesins of the T4 Superfamily: A Complex Modular Determinant of the Phage’s Host Specificity
journal, January 2011

  • Trojet, Sabrina N.; Caumont-Sarcos, Anne; Perrody, Elsa
  • Genome Biology and Evolution, Vol. 3
  • DOI: 10.1093/gbe/evr059

Contact-dependent growth inhibition toxins exploit multiple independent cell-entry pathways
journal, August 2015

  • Willett, Julia L. E.; Gucinski, Grant C.; Fatherree, Jackson P.
  • Proceedings of the National Academy of Sciences, Vol. 112, Issue 36
  • DOI: 10.1073/pnas.1512124112

A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core
journal, July 2018

  • Zimmermann, Lukas; Stephens, Andrew; Nam, Seung-Zin
  • Journal of Molecular Biology, Vol. 430, Issue 15
  • DOI: 10.1016/j.jmb.2017.12.007

LINC'ing form and function at the nuclear envelope
journal, June 2015

T-even-type bacteriophages use an adhesin for recognition of cellular receptors
journal, March 1987

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes
journal, March 2007

DISOPRED3: precise disordered region predictions with annotated protein-binding activity
journal, November 2014

Fine Structure of a Genetic Region in Bacteriophage
journal, June 1955

  • Benzer, S.
  • Proceedings of the National Academy of Sciences, Vol. 41, Issue 6
  • DOI: 10.1073/pnas.41.6.344

Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin
journal, February 2009

  • Leiman, P. G.; Basler, M.; Ramagopal, U. A.
  • Proceedings of the National Academy of Sciences, Vol. 106, Issue 11
  • DOI: 10.1073/pnas.0813360106

Contact‐dependent growth inhibition induces high levels of antibiotic‐tolerant persister cells in clonal bacterial populations
journal, March 2018

  • Ghosh, Anirban; Baltekin, Özden; Wäneskog, Marcus
  • The EMBO Journal, Vol. 37, Issue 9
  • DOI: 10.15252/embj.201798026

Cloning Serratia entomophila Antifeeding Genes--a Putative Defective Prophage Active against the Grass Grub Costelytra zealandica
journal, July 2004

Bacteriophage Therapy: Clinical Trials and Regulatory Hurdles
journal, October 2018

  • Furfaro, Lucy L.; Payne, Matthew S.; Chang, Barbara J.
  • Frontiers in Cellular and Infection Microbiology, Vol. 8
  • DOI: 10.3389/fcimb.2018.00376

WDSPdb: a database for WD40-repeat proteins
journal, October 2014

  • Wang, Yang; Hu, Xue-Jia; Zou, Xu-Dong
  • Nucleic Acids Research, Vol. 43, Issue D1
  • DOI: 10.1093/nar/gku1023

Evolutionary Origins of the Eukaryotic Shikimate Pathway: Gene Fusions, Horizontal Gene Transfer, and Endosymbiotic Replacements
journal, September 2006

  • Richards, Thomas A.; Dacks, Joel B.; Campbell, Samantha A.
  • Eukaryotic Cell, Vol. 5, Issue 9
  • DOI: 10.1128/EC.00106-06

RPA-Mediated Recruitment of the E3 Ligase RFWD3 Is Vital for Interstrand Crosslink Repair and Human Health
journal, June 2017

Contractile injection systems of bacteriophages and related systems: Conserved features of a contractile sheath-rigid tube mechanism
journal, February 2018

  • Taylor, Nicholas M. I.; van Raaij, Mark J.; Leiman, Petr G.
  • Molecular Microbiology, Vol. 108, Issue 1
  • DOI: 10.1111/mmi.13921

Structure of the cell-puncturing device of bacteriophage T4
journal, January 2002

  • Kanamaru, Shuji; Leiman, Petr G.; Kostyuchenko, Victor A.
  • Nature, Vol. 415, Issue 6871
  • DOI: 10.1038/415553a

Acyl-CoA dehydrogenases. A mechanistic overview
journal, February 2004

The carbohydrate-active enzymes database (CAZy) in 2013
journal, November 2013

  • Lombard, Vincent; Golaconda Ramulu, Hemalatha; Drula, Elodie
  • Nucleic Acids Research, Vol. 42, Issue D1
  • DOI: 10.1093/nar/gkt1178

Salmonella Phage S16 Tail Fiber Adhesin Features a Rare Polyglycine Rich Domain for Host Recognition
journal, December 2018

Chromosome Choreography: The Meiotic Ballet
journal, August 2003

Genetic wiring maps of single-cell protein states reveal an off-switch for GPCR signalling
journal, May 2017

  • Brockmann, Markus; Blomen, Vincent A.; Nieuwenhuis, Joppe
  • Nature, Vol. 546, Issue 7657
  • DOI: 10.1038/nature22376

Contact-Dependent Growth Inhibition (CDI) and CdiB/CdiA Two-Partner Secretion Proteins
journal, November 2015

  • Willett, Julia L. E.; Ruhe, Zachary C.; Goulding, Celia W.
  • Journal of Molecular Biology, Vol. 427, Issue 23
  • DOI: 10.1016/j.jmb.2015.09.010

Automated evaluation of quaternary structures from protein crystals
journal, April 2018

Mechanisms of enzymatic glycoside hydrolysis
journal, January 1994

Modified Bacteriophage S16 Long Tail Fiber Proteins for Rapid and Specific Immobilization and Detection of Salmonella Cells
journal, April 2017

  • Denyes, Jenna M.; Dunne, Matthew; Steiner, Stanislava
  • Applied and Environmental Microbiology, Vol. 83, Issue 12
  • DOI: 10.1128/AEM.00277-17

Catalytic triads and their relatives
journal, September 1998

Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states
journal, March 2015

  • Ge, Peng; Scholl, Dean; Leiman, Petr G.
  • Nature Structural & Molecular Biology, Vol. 22, Issue 5
  • DOI: 10.1038/nsmb.2995

Staphylococcal SCCmec elements encode an active MCM-like helicase and thus may be replicative
journal, August 2016

  • Mir-Sanchis, Ignacio; Roman, Christina A.; Misiura, Agnieszka
  • Nature Structural & Molecular Biology, Vol. 23, Issue 10
  • DOI: 10.1038/nsmb.3286

Programmed Secretion Arrest and Receptor-Triggered Toxin Export during Antibacterial Contact-Dependent Growth Inhibition
journal, November 2018

Biochemical and Molecular Characterization of Secreted α-Xylosidase from Aspergillus niger
journal, October 2011

  • Scott-Craig, John S.; Borrusch, Melissa S.; Banerjee, Goutami
  • Journal of Biological Chemistry, Vol. 286, Issue 50
  • DOI: 10.1074/jbc.M111.307397

The AidB Component of the Escherichia coli Adaptive Response to Alkylating Agents Is a Flavin-Containing, DNA-Binding Protein
journal, December 2005

Structural Basis for Substrate Selectivity of the E3 Ligase COP1
journal, May 2016

RFWD3-Mdm2 ubiquitin ligase complex positively regulates p53 stability in response to DNA damage
journal, February 2010

  • Fu, X.; Yucer, N.; Liu, S.
  • Proceedings of the National Academy of Sciences, Vol. 107, Issue 10
  • DOI: 10.1073/pnas.0912094107

Structural basis of toxicity and immunity in contact-dependent growth inhibition (CDI) systems
journal, December 2012

  • Morse, R. P.; Nikolakakis, K. C.; Willett, J. L. E.
  • Proceedings of the National Academy of Sciences, Vol. 109, Issue 52
  • DOI: 10.1073/pnas.1216238110

Dissecting the telomere–inner nuclear membrane interface formed in meiosis
journal, October 2017

  • Pendlebury, Devon F.; Fujiwara, Yasuhiro; Tesmer, Valerie M.
  • Nature Structural & Molecular Biology, Vol. 24, Issue 12
  • DOI: 10.1038/nsmb.3493

Mechanism of Phosphoryl Transfer Catalyzed by Shikimate Kinase from Mycobacterium tuberculosis
journal, December 2006

  • Hartmann, Marcus D.; Bourenkov, Gleb P.; Oberschall, Attila
  • Journal of Molecular Biology, Vol. 364, Issue 3
  • DOI: 10.1016/j.jmb.2006.09.001

A Virulence Locus of Pseudomonas aeruginosa Encodes a Protein Secretion Apparatus
journal, June 2006

Enhancement of fermentable sugar yields by α-xylosidase supplementation of commercial cellulases
journal, January 2013

  • Jabbour, Dina; Borrusch, Melissa S.; Banerjee, Goutami
  • Biotechnology for Biofuels, Vol. 6, Issue 1
  • DOI: 10.1186/1754-6834-6-58

PCNA-mediated stabilization of E3 ligase RFWD3 at the replication fork is essential for DNA replication
journal, December 2018

  • Lin, Yo-Chuen; Wang, Yating; Hsu, Rosaline
  • Proceedings of the National Academy of Sciences, Vol. 115, Issue 52
  • DOI: 10.1073/pnas.1814521115

Application of bacteriophages for detection of foodborne pathogens
journal, February 2014

  • Schmelcher, Mathias; Loessner, Martin J.
  • Bacteriophage, Vol. 4, Issue 2
  • DOI: 10.4161/bact.28137

Structure of dehydroquinate synthase reveals an active site capable of multistep catalysis
journal, July 1998

  • Carpenter, Elisabeth P.; Hawkins, Alastair R.; Frost, John W.
  • Nature, Vol. 394, Issue 6690
  • DOI: 10.1038/28431

Telomeric TERB1–TRF1 interaction is crucial for male meiosis
journal, October 2017

  • Long, Juanjuan; Huang, Chenhui; Chen, Yanyan
  • Nature Structural & Molecular Biology, Vol. 24, Issue 12
  • DOI: 10.1038/nsmb.3496

Structure of the T4 baseplate and its function in triggering sheath contraction
journal, May 2016

  • Taylor, Nicholas M. I.; Prokhorov, Nikolai S.; Guerrero-Ferreira, Ricardo C.
  • Nature, Vol. 533, Issue 7603
  • DOI: 10.1038/nature17971

Structural Enzymology of Cellvibrio japonicus Agd31B Protein Reveals α-Transglucosylase Activity in Glycoside Hydrolase Family 31
journal, November 2012

  • Larsbrink, Johan; Izumi, Atsushi; Hemsworth, Glyn R.
  • Journal of Biological Chemistry, Vol. 287, Issue 52
  • DOI: 10.1074/jbc.M112.416511

Structural remodeling of bacteriophage T4 and host membranes during infection initiation
journal, August 2015

  • Hu, Bo; Margolin, William; Molineux, Ian J.
  • Proceedings of the National Academy of Sciences, Vol. 112, Issue 35
  • DOI: 10.1073/pnas.1501064112

Interaction of the herbicide glyphosate with its target enzyme 5-enolpyruvylshikimate 3-phosphate synthase in atomic detail
journal, February 2001

  • Schonbrunn, E.; Eschenburg, S.; Shuttleworth, W. A.
  • Proceedings of the National Academy of Sciences, Vol. 98, Issue 4
  • DOI: 10.1073/pnas.98.4.1376

Glyphosate: a once-in-a-century herbicide
journal, January 2008

  • Duke, Stephen O.; Powles, Stephen B.
  • Pest Management Science, Vol. 64, Issue 4
  • DOI: 10.1002/ps.1518

Structural basis of meiotic telomere attachment to the nuclear envelope by MAJIN-TERB2-TERB1
journal, December 2018

The Shikimate Pathway — A Metabolic Tree with Many Branche
journal, January 1990

  • Bentley, Ronald; Haslam, E.
  • Critical Reviews in Biochemistry and Molecular Biology, Vol. 25, Issue 5
  • DOI: 10.3109/10409239009090615

Biomass Recalcitrance: Engineering Plants and Enzymes for Biofuels Production
journal, February 2007

  • Himmel, M. E.; Ding, S.-Y.; Johnson, D. K.
  • Science, Vol. 315, Issue 5813, p. 804-807
  • DOI: 10.1126/science.1137016

Unraveling the essential role of CysK in CDI toxin activation
journal, August 2016

  • Johnson, Parker M.; Beck, Christina M.; Morse, Robert P.
  • Proceedings of the National Academy of Sciences, Vol. 113, Issue 35
  • DOI: 10.1073/pnas.1607112113

Contact-Dependent Inhibition of Growth in Escherichia coli
journal, August 2005

Structural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases
journal, November 2017

  • Pinkas, Daniel M.; Sanvitale, Caroline E.; Bufton, Joshua C.
  • Biochemical Journal, Vol. 474, Issue 22
  • DOI: 10.1042/BCJ20170527

The CDI toxin of Yersinia kristensenii is a novel bacterial member of the RNase A superfamily
journal, April 2017

  • Batot, Gaëlle; Michalska, Karolina; Ekberg, Greg
  • Nucleic Acids Research, Vol. 45, Issue 9
  • DOI: 10.1093/nar/gkx230

MAJIN Links Telomeric DNA to the Nuclear Membrane by Exchanging Telomere Cap
journal, November 2015

Crystal Structure of an Unusual Single-Stranded DNA-Binding Protein Encoded by Staphylococcal Cassette Chromosome Elements
journal, August 2018

Protein Dynamics Enhance Electronic Coupling in Electron Transfer Complexes
journal, June 2001

  • Chohan, Kamaldeep K.; Jones, Matthew; Grossmann, J. Günter
  • Journal of Biological Chemistry, Vol. 276, Issue 36
  • DOI: 10.1074/jbc.M101341200

Pseudomonas aeruginosa Contact-Dependent Growth Inhibition Plays Dual Role in Host-Pathogen Interactions
journal, November 2017

Can't you hear me knocking: contact-dependent competition and cooperation in bacteria
journal, April 2017

  • Jones, Allison M.; Low, David A.; Hayes, Christopher S.
  • Emerging Topics in Life Sciences, Vol. 1, Issue 1
  • DOI: 10.1042/ETLS20160019

Interbacterial signaling via Burkholderia contact-dependent growth inhibition system proteins
journal, June 2016

  • Garcia, Erin C.; Perault, Andrew I.; Marlatt, Sara A.
  • Proceedings of the National Academy of Sciences, Vol. 113, Issue 29
  • DOI: 10.1073/pnas.1606323113

Sequence of glutamine synthetase from Salmonella typhimurium and implications for the protein structure
journal, January 1986

The Architecture of the Anbu Complex Reflects an Evolutionary Intermediate at the Origin of the Proteasome System
journal, June 2017

To err (meiotically) is human: the genesis of human aneuploidy
journal, April 2001

  • Hassold, Terry; Hunt, Patricia
  • Nature Reviews Genetics, Vol. 2, Issue 4
  • DOI: 10.1038/35066065

Structure of a novel antibacterial toxin that exploits elongation factor Tu to cleave specific transfer RNAs
journal, August 2017

  • Michalska, Karolina; Gucinski, Grant C.; Garza-Sánchez, Fernando
  • Nucleic Acids Research, Vol. 45, Issue 17
  • DOI: 10.1093/nar/gkx700

Acyl-CoA dehydrogenases and acyl-CoA oxidases. Structural basis for mechanistic similarities and differences
journal, February 2004

KCTD Hetero-oligomers Confer Unique Kinetic Properties on Hippocampal GABA B Receptor-Induced K + Currents
journal, December 2016

Modular composition and dynamics of native GABAB receptors identified by high-resolution proteomics
journal, December 2015

  • Schwenk, Jochen; Pérez-Garci, Enrique; Schneider, Andy
  • Nature Neuroscience, Vol. 19, Issue 2
  • DOI: 10.1038/nn.4198

Substrate Stereospecificity in Oxidation of (25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA by Peroxisomal Trihydroxy-5β- cholestanoyl-CoA Oxidase
journal, July 1996

  • Pedersen, Jan I.; Veggan, Turid; Björkhem, Ingemar
  • Biochemical and Biophysical Research Communications, Vol. 224, Issue 1
  • DOI: 10.1006/bbrc.1996.0981

Structure and transcriptional regulation of the Escherichia coli adaptive response gene aidB.
journal, November 1994

Native GABAB receptors are heteromultimers with a family of auxiliary subunits
journal, April 2010

  • Schwenk, Jochen; Metz, Michaela; Zolles, Gerd
  • Nature, Vol. 465, Issue 7295
  • DOI: 10.1038/nature08964

Meiotic Recombination: The Essence of Heredity
journal, October 2015

Towards a complete structural deciphering of Type VI secretion system
journal, April 2018

  • Nguyen, Van Son; Douzi, Badreddine; Durand, Eric
  • Current Opinion in Structural Biology, Vol. 49
  • DOI: 10.1016/j.sbi.2018.01.007

Acyl-CoA Dehydrogenase Drives Heat Adaptation by Sequestering Fatty Acids
journal, May 2015

Using Force to Punch Holes: Mechanics of Contractile Nanomachines
journal, September 2017

Biallelic mutations in the ubiquitin ligase RFWD3 cause Fanconi anemia
journal, July 2017

  • Knies, Kerstin; Inano, Shojiro; Ramírez, María J.
  • Journal of Clinical Investigation, Vol. 127, Issue 8
  • DOI: 10.1172/JCI92069

LGA: a method for finding 3D similarities in protein structures
journal, July 2003

Functional plasticity of antibacterial EndoU toxins
journal, August 2018

  • Michalska, Karolina; Quan Nhan, Dinh; Willett, Julia L. E.
  • Molecular Microbiology, Vol. 109, Issue 4
  • DOI: 10.1111/mmi.14007

Bacteriophages and their implications on future biotechnology: a review
journal, January 2012

  • Haq, Irshad Ul; Chaudhry, Waqas Nasir; Akhtar, Maha Nadeem
  • Virology Journal, Vol. 9, Issue 1
  • DOI: 10.1186/1743-422X-9-9

The Ubiquitin Code
journal, July 2012

Opposite Effects of KCTD Subunit Domains on GABA B Receptor-mediated Desensitization
journal, October 2012

  • Seddik, Riad; Jungblut, Stefan P.; Silander, Olin K.
  • Journal of Biological Chemistry, Vol. 287, Issue 47
  • DOI: 10.1074/jbc.M112.412767

Extensive Domain Motion and Electron Transfer in the Human Electron Transferring Flavoprotein·Medium Chain Acyl-CoA Dehydrogenase Complex
journal, May 2004

  • Toogood, Helen S.; van Thiel, Adam; Basran, Jaswir
  • Journal of Biological Chemistry, Vol. 279, Issue 31
  • DOI: 10.1074/jbc.M404884200

Structure of the bacteriophage T4 long tail fiber receptor-binding tip
journal, November 2010

  • Bartual, S. G.; Otero, J. M.; Garcia-Doval, C.
  • Proceedings of the National Academy of Sciences, Vol. 107, Issue 47
  • DOI: 10.1073/pnas.1011218107

Recombination, Pairing, and Synapsis of Homologs during Meiosis
journal, May 2015

Morphogenesis of the T4 tail and tail fibers
journal, December 2010

  • Leiman, Petr G.; Arisaka, Fumio; van Raaij, Mark J.
  • Virology Journal, Vol. 7, Issue 1
  • DOI: 10.1186/1743-422X-7-355
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