Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom

Nowinski, Brent; Smith, Christa B.; Thomas, Courtney M.; Esson, Kaitlin; Marin, Roman; Preston, Christina M.; Birch, James M.; Scholin, Christopher A.; Huntemann, Marcel; Clum, Alicia; Foster, Brian; Foster, Bryce; Roux, Simon; Palaniappan, Krishnaveni; Varghese, Neha; Mukherjee, Supratim; Reddy, T. B.  K.; Daum, Chris; Copeland, Alex; Chen, I. -Min A.; Ivanova, Natalia N.; Kyrpides, Nikos C.; Glavina del Rio, Tijana; Whitman, William B.; Kiene, Ronald P.; Eloe-Fadrosh, Emiley A.; Moran, Mary Ann

doi:10.1038/s41597-019-0132-4

Title: Microbial metagenomes and metatranscriptomes during a coastal phytoplankton bloom

Journal Article · 22 July 2019 · Scientific Data

DOI: https://doi.org/10.1038/s41597-019-0132-4 · OSTI ID:1559811

^[1]; Smith, Christa B. ^[1]; Thomas, Courtney M. ^[1]; Esson, Kaitlin ^[2]; Marin, Roman ^[3]; Preston, Christina M. ^[3]; Birch, James M. ^[3]; Scholin, Christopher A. ^[3];

^[4]; Clum, Alicia ^[4]; Foster, Brian ^[4]; Foster, Bryce ^[4];

^[4]; Palaniappan, Krishnaveni ^[4]; Varghese, Neha ^[4];

^[4]; Reddy, T. B. K. ^[4]; Daum, Chris ^[4]; Copeland, Alex ^[4]; Chen, I. -Min A. ^[4] more »

Univ. of Georgia, Athens, GA (United States)
Univ. of South Alabama, Mobile, AL (United States); Dauphin Island Sea Lab, Dauphin Island, AL (United States)
Monterey Bay Aquarium Research Inst., Moss Landing, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)

Metagenomic and metatranscriptomic time-series data covering a 52-day period in the fall of 2016 provide an inventory of bacterial and archaeal community genes, transcripts, and taxonomy during an intense dinoflagellate bloom in Monterey Bay, CA, USA. The dataset comprises 84 metagenomes (0.8 terabases), 82 metatranscriptomes (1.1 terabases), and 88 16S rRNA amplicon libraries from samples collected on 41 dates. The dataset also includes 88 18S rRNA amplicon libraries, characterizing the taxonomy of the eukaryotic community during the bloom. Accompanying the sequence data are chemical and biological measurements associated with each sample. These datasets will facilitate studies of the structure and function of marine bacterial communities during episodic phytoplankton blooms.

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC); National Science Foundation (NSF)

Grant/Contract Number:: AC02-05CH11231

OSTI ID:: 1559811

Journal Information:: Scientific Data, Journal Name: Scientific Data Journal Issue: 1 Vol. 6; ISSN 2052-4463

Publisher:: Nature Publishing GroupCopyright Statement

Country of Publication:: United States

Language:: English

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Unprecedented DMSP Concentrations in a Massive Dinoflagellate Bloom in Monterey Bay, CA Kiene, Ronald P.; Nowinski, Brent; Esson, Kaitlin Geophysical Research Letters, Vol. 46, Issue 21 https://doi.org/10.1029/2019gl085496	journal	November 2019

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