Emergence of Radial Tree of Bend Stripes in Active Nematics

Sokolov, Andrey; Mozaffari, Ali; Zhang, Rui; de Pablo, Juan J.; Snezhko, Alexey

doi:10.1103/PhysRevX.9.031014

Title: Emergence of Radial Tree of Bend Stripes in Active Nematics

Journal Article · 30 June 2019 · Physical Review. X

DOI: https://doi.org/10.1103/PhysRevX.9.031014 · OSTI ID:1545959

Sokolov, Andrey; Mozaffari, Ali; Zhang, Rui; de Pablo, Juan J.; Snezhko, Alexey

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Research Organization:: Argonne National Lab. (ANL), Lemont, IL (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES) (SC-22). Materials Sciences & Engineering Division

Grant/Contract Number:: AC02-06CH11357

OSTI ID:: 1545959

Journal Information:: Physical Review. X, Journal Name: Physical Review. X Journal Issue: 3 Vol. 9; ISSN PRXHAE; ISSN 2160-3308

Publisher:: American Physical SocietyCopyright Statement

Country of Publication:: United States

Language:: English

References (67)

From Microscopic Theory to Macroscopic Theory: a Systematic Study on Modeling for Liquid Crystals Han, Jiequn; Luo, Yi; Wang, Wei Archive for Rational Mechanics and Analysis, Vol. 215, Issue 3 https://doi.org/10.1007/s00205-014-0792-3	journal	September 2014
Physics of colloidal dispersions in nematic liquid crystals Stark, Holger Physics Reports, Vol. 351, Issue 6 https://doi.org/10.1016/S0370-1573(00)00144-7	journal	October 2001
Principles of Condensed Matter Physics Chaikin, P. M.; Lubensky, T. C. https://doi.org/10.1017/CBO9780511813467	book	January 1995
Polar patterns of driven filaments Schaller, Volker; Weber, Christoph; Semmrich, Christine Nature, Vol. 467, Issue 7311 https://doi.org/10.1038/nature09312	journal	September 2010
Spontaneous motion in hierarchically assembled active matter Sanchez, Tim; Chen, Daniel T. N.; DeCamp, Stephen J. Nature, Vol. 491, Issue 7424 https://doi.org/10.1038/nature11591	journal	November 2012
Topological defects in epithelia govern cell death and extrusion Saw, Thuan Beng; Doostmohammadi, Amin; Nier, Vincent Nature, Vol. 544, Issue 7649 https://doi.org/10.1038/nature21718	journal	April 2017
Topological defects control collective dynamics in neural progenitor cell cultures Kawaguchi, Kyogo; Kageyama, Ryoichiro; Sano, Masaki Nature, Vol. 545, Issue 7654 https://doi.org/10.1038/nature22321	journal	April 2017
Stabilization of active matter by flow-vortex lattices and defect ordering Doostmohammadi, Amin; Adamer, Michael F.; Thampi, Sumesh P. Nature Communications, Vol. 7, Issue 1 https://doi.org/10.1038/ncomms10557	journal	February 2016
Rapid expulsion of microswimmers by a vortical flow Sokolov, Andrey; Aranson, Igor S. Nature Communications, Vol. 7, Issue 1 https://doi.org/10.1038/ncomms11114	journal	March 2016
Onset of meso-scale turbulence in active nematics Doostmohammadi, Amin; Shendruk, Tyler N.; Thijssen, Kristian Nature Communications, Vol. 8, Issue 1 https://doi.org/10.1038/ncomms15326	journal	May 2017
Orientational order of motile defects in active nematics DeCamp, Stephen J.; Redner, Gabriel S.; Baskaran, Aparna Nature Materials, Vol. 14, Issue 11 https://doi.org/10.1038/nmat4387	journal	August 2015
Ferromagnetic and antiferromagnetic order in bacterial vortex lattices Wioland, Hugo; Woodhouse, Francis G.; Dunkel, Jörn Nature Physics, Vol. 12, Issue 4 https://doi.org/10.1038/nphys3607	journal	January 2016
Topological defects in confined populations of spindle-shaped cells Duclos, Guillaume; Erlenkämper, Christoph; Joanny, Jean-François Nature Physics, Vol. 13, Issue 1 https://doi.org/10.1038/nphys3876	journal	September 2016
Curvature-induced defect unbinding and dynamics in active nematic toroids Ellis, Perry W.; Pearce, Daniel J. G.; Chang, Ya-Wen Nature Physics, Vol. 14, Issue 1 https://doi.org/10.1038/nphys4276	journal	October 2017
Instability of expanding bacterial droplets Sokolov, Andrey; Rubio, Leonardo Dominguez; Brady, John F. Nature Communications, Vol. 9, Issue 1 https://doi.org/10.1038/s41467-018-03758-z	journal	April 2018
Active nematics Doostmohammadi, Amin; Ignés-Mullol, Jordi; Yeomans, Julia M. Nature Communications, Vol. 9, Issue 1 https://doi.org/10.1038/s41467-018-05666-8	journal	August 2018
Engineering bacterial vortex lattice via direct laser lithography Nishiguchi, Daiki; Aranson, Igor S.; Snezhko, Alexey Nature Communications, Vol. 9, Issue 1 https://doi.org/10.1038/s41467-018-06842-6	journal	October 2018
Spontaneous shear flow in confined cellular nematics Duclos, G.; Blanch-Mercader, C.; Yashunsky, V. Nature Physics, Vol. 14, Issue 7 https://doi.org/10.1038/s41567-018-0099-7	journal	April 2018
Selection mechanism at the onset of active turbulence Martínez-Prat, Berta; Ignés-Mullol, Jordi; Casademunt, Jaume Nature Physics, Vol. 15, Issue 4 https://doi.org/10.1038/s41567-018-0411-6	journal	February 2019
Transport of particles in liquid crystals Lavrentovich, Oleg D. Soft Matter, Vol. 10, Issue 9 https://doi.org/10.1039/C3SM51628H	journal	January 2014
Perfect nematic order in confined monolayers of spindle-shaped cells Duclos, G.; Garcia, S.; Yevick, H. G. Soft Matter, Vol. 10, Issue 14 https://doi.org/10.1039/C3SM52323C	journal	January 2014
Negative stiffness and modulated states in active nematics Srivastava, Pragya; Mishra, Prashant; Marchetti, M. Cristina Soft Matter, Vol. 12, Issue 39 https://doi.org/10.1039/C6SM01493C	journal	January 2016
Dancing disclinations in confined active nematics Shendruk, Tyler N.; Doostmohammadi, Amin; Thijssen, Kristian Soft Matter, Vol. 13, Issue 21 https://doi.org/10.1039/C6SM02310J	journal	January 2017
Motility of active nematic films driven by “active anchoring” Blow, Matthew L.; Aqil, Marco; Liebchen, Benno Soft Matter, Vol. 13, Issue 36 https://doi.org/10.1039/C7SM00325K	journal	January 2017
The interplay between activity and filament flexibility determines the emergent properties of active nematics Joshi, Abhijeet; Putzig, Elias; Baskaran, Aparna Soft Matter, Vol. 15, Issue 1 https://doi.org/10.1039/C8SM02202J	journal	January 2019
The Physics of Liquid Crystals de Gennes, P. G.; Prost, J.; Pelcovits, Robert Physics Today, Vol. 48, Issue 5 https://doi.org/10.1063/1.2808028	journal	May 1995
Living liquid crystals Zhou, S.; Sokolov, A.; Lavrentovich, O. D. Proceedings of the National Academy of Sciences, Vol. 111, Issue 4 https://doi.org/10.1073/pnas.1321926111	journal	January 2014
Fluid flows created by swimming bacteria drive self-organization in confined suspensions Lushi, Enkeleida; Wioland, Hugo; Goldstein, Raymond E. Proceedings of the National Academy of Sciences, Vol. 111, Issue 27 https://doi.org/10.1073/pnas.1405698111	journal	June 2014
Interplay of structure, elasticity, and dynamics in actin-based nematic materials Zhang, Rui; Kumar, Nitin; Ross, Jennifer L. Proceedings of the National Academy of Sciences, Vol. 115, Issue 2 https://doi.org/10.1073/pnas.1713832115	journal	December 2017
Data-driven quantitative modeling of bacterial active nematics Li, He; Shi, Xia-qing; Huang, Mingji Proceedings of the National Academy of Sciences, Vol. 116, Issue 3 https://doi.org/10.1073/pnas.1812570116	journal	December 2018
Self-organized dynamics and the transition to turbulence of confined active nematics Opathalage, Achini; Norton, Michael M.; Juniper, Michael P. N. Proceedings of the National Academy of Sciences, Vol. 116, Issue 11 https://doi.org/10.1073/pnas.1816733116	journal	February 2019
Antipolar ordering of topological defects in active liquid crystals Oza, Anand U.; Dunkel, Jörn New Journal of Physics, Vol. 18, Issue 9 https://doi.org/10.1088/1367-2630/18/9/093006	journal	September 2016
Spontaneous topological charging of tactoids in a living nematic Genkin, Mikhail M.; Sokolov, Andrey; Aranson, Igor S. New Journal of Physics, Vol. 20, Issue 4 https://doi.org/10.1088/1367-2630/aab1a3	journal	April 2018
Thermodynamics of Flowing Systems: with Internal Microstructure Beris, Antony N.; Edwards, Brian J. https://doi.org/10.1093/oso/9780195076943.001.0001	book	August 1994
Defect dynamics in active nematics Giomi, Luca; Bowick, Mark J.; Mishra, Prashant Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 372, Issue 2029 https://doi.org/10.1098/rsta.2013.0365	journal	November 2014
Tunable dynamics of microtubule-based active isotropic gels Henkin, Gil; DeCamp, Stephen J.; Chen, Daniel T. N. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 372, Issue 2029 https://doi.org/10.1098/rsta.2014.0142	journal	November 2014
Steady-state hydrodynamic instabilities of active liquid crystals: Hybrid lattice Boltzmann simulations Marenduzzo, D.; Orlandini, E.; Cates, M. E. Physical Review E, Vol. 76, Issue 3 https://doi.org/10.1103/PhysRevE.76.031921	journal	September 2007
Dynamics of swimming bacteria: Transition to directional order at high concentration Cisneros, Luis H.; Kessler, John O.; Ganguly, Sujoy Physical Review E, Vol. 83, Issue 6 https://doi.org/10.1103/PhysRevE.83.061907	journal	June 2011
Individual behavior and pairwise interactions between microswimmers in anisotropic liquid Sokolov, Andrey; Zhou, Shuang; Lavrentovich, Oleg D. Physical Review E, Vol. 91, Issue 1 https://doi.org/10.1103/PhysRevE.91.013009	journal	January 2015
Insensitivity of active nematic liquid crystal dynamics to topological constraints Norton, Michael M.; Baskaran, Arvind; Opathalage, Achini Physical Review E, Vol. 97, Issue 1 https://doi.org/10.1103/PhysRevE.97.012702	journal	January 2018
Analytical structure, dynamics, and coarse graining of a kinetic model of an active fluid Gao, Tong; Betterton, Meredith D.; Jhang, An-Sheng Physical Review Fluids, Vol. 2, Issue 9 https://doi.org/10.1103/PhysRevFluids.2.093302	journal	September 2017
Excitable Patterns in Active Nematics Giomi, L.; Mahadevan, L.; Chakraborty, B. Physical Review Letters, Vol. 106, Issue 21 https://doi.org/10.1103/PhysRevLett.106.218101	journal	May 2011
Confined Active Nematic Flow in Cylindrical Capillaries Ravnik, Miha; Yeomans, Julia M. Physical Review Letters, Vol. 110, Issue 2 https://doi.org/10.1103/PhysRevLett.110.026001	journal	January 2013
Defect Annihilation and Proliferation in Active Nematics Giomi, Luca; Bowick, Mark J.; Ma, Xu Physical Review Letters, Vol. 110, Issue 22 https://doi.org/10.1103/PhysRevLett.110.228101	journal	May 2013
Defect-Mediated Morphologies in Growing Cell Colonies Doostmohammadi, Amin; Thampi, Sumesh P.; Yeomans, Julia M. Physical Review Letters, Vol. 117, Issue 4 https://doi.org/10.1103/PhysRevLett.117.048102	journal	July 2016
Defect Unbinding in Active Nematics Shankar, Suraj; Ramaswamy, Sriram; Marchetti, M. Cristina Physical Review Letters, Vol. 121, Issue 10 https://doi.org/10.1103/PhysRevLett.121.108002	journal	September 2018
Emergence of Active Nematic Behavior in Monolayers of Isotropic Cells Mueller, Romain; Yeomans, Julia M.; Doostmohammadi, Amin Physical Review Letters, Vol. 122, Issue 4 https://doi.org/10.1103/PhysRevLett.122.048004	journal	February 2019
Hydrodynamic Fluctuations and Instabilities in Ordered Suspensions of Self-Propelled Particles Aditi Simha, R.; Ramaswamy, Sriram Physical Review Letters, Vol. 89, Issue 5 https://doi.org/10.1103/PhysRevLett.89.058101	journal	July 2002
Self-Concentration and Large-Scale Coherence in Bacterial Dynamics Dombrowski, Christopher; Cisneros, Luis; Chatkaew, Sunita Physical Review Letters, Vol. 93, Issue 9 https://doi.org/10.1103/PhysRevLett.93.098103	journal	August 2004
Hydrodynamics and Rheology of Active Liquid Crystals: A Numerical Investigation Marenduzzo, D.; Orlandini, E.; Yeomans, J. M. Physical Review Letters, Vol. 98, Issue 11 https://doi.org/10.1103/PhysRevLett.98.118102	journal	March 2007
Concentration Dependence of the Collective Dynamics of Swimming Bacteria Sokolov, Andrey; Aranson, Igor S.; Kessler, John O. Physical Review Letters, Vol. 98, Issue 15 https://doi.org/10.1103/PhysRevLett.98.158102	journal	April 2007
Geometry and Topology of Turbulence in Active Nematics Giomi, Luca Physical Review X, Vol. 5, Issue 3 https://doi.org/10.1103/PhysRevX.5.031003	journal	July 2015
Topological Defects in a Living Nematic Ensnare Swimming Bacteria Genkin, Mikhail M.; Sokolov, Andrey; Lavrentovich, Oleg D. Physical Review X, Vol. 7, Issue 1 https://doi.org/10.1103/PhysRevX.7.011029	journal	March 2017
Physics of liquid crystals Stephen, Michael J.; Straley, Joseph P. Reviews of Modern Physics, Vol. 46, Issue 4 https://doi.org/10.1103/RevModPhys.46.617	journal	October 1974
Hydrodynamics of soft active matter Marchetti, M. C.; Joanny, J. F.; Ramaswamy, S. Reviews of Modern Physics, Vol. 85, Issue 3 https://doi.org/10.1103/RevModPhys.85.1143	journal	July 2013
Active micromachines: Microfluidics powered by mesoscale turbulence Thampi, Sumesh P.; Doostmohammadi, Amin; Shendruk, Tyler N. Science Advances, Vol. 2, Issue 7 https://doi.org/10.1126/sciadv.1501854	journal	July 2016
Active nematic emulsions Guillamat, Pau; Kos, Žiga; Hardoüin, Jérôme Science Advances, Vol. 4, Issue 4 https://doi.org/10.1126/sciadv.aao1470	journal	April 2018
Tunable structure and dynamics of active liquid crystals Kumar, Nitin; Zhang, Rui; de Pablo, Juan J. Science Advances, Vol. 4, Issue 10 https://doi.org/10.1126/sciadv.aat7779	journal	October 2018
A Molecular Clutch Disables Flagella in the Bacillus subtilis Biofilm Blair, K. M.; Turner, L.; Winkelman, J. T. Science, Vol. 320, Issue 5883 https://doi.org/10.1126/science.1157877	journal	June 2008
Command of active matter by topological defects and patterns Peng, Chenhui; Turiv, Taras; Guo, Yubing Science, Vol. 354, Issue 6314 https://doi.org/10.1126/science.aah6936	journal	November 2016
Transition from turbulent to coherent flows in confined three-dimensional active fluids Wu, Kun-Ta; Hishamunda, Jean Bernard; Chen, Daniel T. N. Science, Vol. 355, Issue 6331 https://doi.org/10.1126/science.aal1979	journal	March 2017
Active turbulence in active nematics Thampi, S. P.; Yeomans, J. M. The European Physical Journal Special Topics, Vol. 225, Issue 4 https://doi.org/10.1140/epjst/e2015-50324-3	journal	July 2016
D YNAMICAL P HENOMENA IN L IQUID -C RYSTALLINE M ATERIALS Rey, Alejandro D.; Denn, Morton M. Annual Review of Fluid Mechanics, Vol. 34, Issue 1 https://doi.org/10.1146/annurev.fluid.34.082401.191847	journal	January 2002
Instabilities and topological defects in active nematics Thampi, Sumesh P.; Golestanian, Ramin; Yeomans, Julia M. EPL (Europhysics Letters), Vol. 105, Issue 1 https://doi.org/10.1209/0295-5075/105/18001	journal	January 2014
Spontaneous flow states in active nematics: A unified picture Edwards, S. A.; Yeomans, J. M. EPL (Europhysics Letters), Vol. 85, Issue 1 https://doi.org/10.1209/0295-5075/85/18008	journal	January 2009
Spontaneous flow transition in active polar gels Voituriez, R.; Joanny, J. F.; Prost, J. Europhysics Letters (EPL), Vol. 70, Issue 3 https://doi.org/10.1209/epl/i2004-10501-2	journal	May 2005
Modeling planar degenerate wetting and anchoring in nematic liquid crystals Fournier, J. -B; Galatola, P. Europhysics Letters (EPL), Vol. 72, Issue 3 https://doi.org/10.1209/epl/i2005-10253-5	journal	November 2005

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