DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Molecular docking predictions of fragrance binding to human leukocyte antigen molecules

Abstract

Abstract Background Over 4000 small chemicals have been identified as allergens capable of inducing skin sensitization. Many sensitizers are hypothesized to act as haptens producing novel antigens, which can be presented to T cells by human leukocyte antigens (HLAs). Recent studies suggest that some chemical allergens use hapten‐independent mechanisms. Objective To determine whether molecular docking can identify HLA molecules that bind skin‐sensitizing chemical allergens. Methods Structural models of HLA molecules were used as the basis for molecular docking of 22 chemical allergens. Allergens predicted to bind HLA‐B*57:01 were tested for their ability to stimulate T cells by the use of proliferation and interferon‐gamma enzyme‐linked immunospot assays. Results Chemical allergens that did not satisfy the criteria for hapten activity in vitro were predicted to bind more strongly to common HLA isoforms than those with known hapten activity. HLA‐B*57:01, which is an HLA allele required for drug hypersensitivity reactions, was predicted to bind several allergens, including benzyl benzoate, benzyl cinnamate, and benzyl salicylate. In in vitro T cell stimulation assays, benzyl salicylate and benzyl cinnamate were found to stimulate T cell responses from HLA‐B*57:01 carriers. Conclusions These data suggest that small‐molecule skin sensitizers have the potential to interact with HLA, and show that Tmore » cell‐based in vitro assays may be used to evaluate the immunogenicity of skin‐sensitizing chemicals.« less

Authors:
ORCiD logo [1];  [1]; ORCiD logo [2]; ORCiD logo [1];  [2]
  1. Department of Pathology, Immunology, and Laboratory Medicine University of Florida College of Medicine Gainesville Florida
  2. Division of Cosmetics, Office of Cosmetics and Colors, CFSAN FDA College Park Maryland
Publication Date:
Sponsoring Org.:
USDOE
OSTI Identifier:
1532595
Resource Type:
Publisher's Accepted Manuscript
Journal Name:
Contact Dermatitis
Additional Journal Information:
Journal Name: Contact Dermatitis Journal Volume: 81 Journal Issue: 3; Journal ID: ISSN 0105-1873
Publisher:
Wiley-Blackwell
Country of Publication:
Denmark
Language:
English

Citation Formats

Schutte, Ryan J., Zhang, Xiaojuan, An, Nan, Ostrov, David A., and Vukmanović, Stanislav. Molecular docking predictions of fragrance binding to human leukocyte antigen molecules. Denmark: N. p., 2019. Web. doi:10.1111/cod.13283.
Schutte, Ryan J., Zhang, Xiaojuan, An, Nan, Ostrov, David A., & Vukmanović, Stanislav. Molecular docking predictions of fragrance binding to human leukocyte antigen molecules. Denmark. https://doi.org/10.1111/cod.13283
Schutte, Ryan J., Zhang, Xiaojuan, An, Nan, Ostrov, David A., and Vukmanović, Stanislav. Tue . "Molecular docking predictions of fragrance binding to human leukocyte antigen molecules". Denmark. https://doi.org/10.1111/cod.13283.
@article{osti_1532595,
title = {Molecular docking predictions of fragrance binding to human leukocyte antigen molecules},
author = {Schutte, Ryan J. and Zhang, Xiaojuan and An, Nan and Ostrov, David A. and Vukmanović, Stanislav},
abstractNote = {Abstract Background Over 4000 small chemicals have been identified as allergens capable of inducing skin sensitization. Many sensitizers are hypothesized to act as haptens producing novel antigens, which can be presented to T cells by human leukocyte antigens (HLAs). Recent studies suggest that some chemical allergens use hapten‐independent mechanisms. Objective To determine whether molecular docking can identify HLA molecules that bind skin‐sensitizing chemical allergens. Methods Structural models of HLA molecules were used as the basis for molecular docking of 22 chemical allergens. Allergens predicted to bind HLA‐B*57:01 were tested for their ability to stimulate T cells by the use of proliferation and interferon‐gamma enzyme‐linked immunospot assays. Results Chemical allergens that did not satisfy the criteria for hapten activity in vitro were predicted to bind more strongly to common HLA isoforms than those with known hapten activity. HLA‐B*57:01, which is an HLA allele required for drug hypersensitivity reactions, was predicted to bind several allergens, including benzyl benzoate, benzyl cinnamate, and benzyl salicylate. In in vitro T cell stimulation assays, benzyl salicylate and benzyl cinnamate were found to stimulate T cell responses from HLA‐B*57:01 carriers. Conclusions These data suggest that small‐molecule skin sensitizers have the potential to interact with HLA, and show that T cell‐based in vitro assays may be used to evaluate the immunogenicity of skin‐sensitizing chemicals.},
doi = {10.1111/cod.13283},
journal = {Contact Dermatitis},
number = 3,
volume = 81,
place = {Denmark},
year = {2019},
month = {7}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1111/cod.13283

Citation Metrics:
Cited by: 3 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

Skin sensitizers in cosmetics and beyond: potential multiple mechanisms of action and importance of T-cell assays for in vitro screening
journal, October 2016


The IMGT/HLA database
journal, October 2012

  • Robinson, James; Halliwell, Jason A.; McWilliam, Hamish
  • Nucleic Acids Research, Vol. 41, Issue D1
  • DOI: 10.1093/nar/gks949

Prevalence of skin disease in a population-based sample of adults from five European countries
journal, March 2018

  • Svensson, A.; Ofenloch, R. F.; Bruze, M.
  • British Journal of Dermatology, Vol. 178, Issue 5
  • DOI: 10.1111/bjd.16248

Immune self-reactivity triggered by drug-modified HLA-peptide repertoire
journal, May 2012

  • Illing, Patricia T.; Vivian, Julian P.; Dudek, Nadine L.
  • Nature, Vol. 486, Issue 7404
  • DOI: 10.1038/nature11147

How frequently are predicted peptides actually recognized by CD8 cells?
journal, April 2016

  • Moldovan, Ioana; Targoni, Oleg; Zhang, Wenji
  • Cancer Immunology, Immunotherapy, Vol. 65, Issue 7
  • DOI: 10.1007/s00262-016-1840-7

Drug hypersensitivity: Pharmacogenetics and clinical syndromes
journal, March 2011

  • Phillips, Elizabeth J.; Chung, Wen-Hung; Mockenhaupt, Maja
  • Journal of Allergy and Clinical Immunology, Vol. 127, Issue 3
  • DOI: 10.1016/j.jaci.2010.11.046

MTiOpenScreen: a web server for structure-based virtual screening
journal, April 2015

  • Labbé, Céline M.; Rey, Julien; Lagorce, David
  • Nucleic Acids Research, Vol. 43, Issue W1
  • DOI: 10.1093/nar/gkv306

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
journal, November 2005


Features and development of Coot
journal, March 2010

  • Emsley, P.; Lohkamp, B.; Scott, W. G.
  • Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 4
  • DOI: 10.1107/S0907444910007493

Small Organic Compounds Enhance Antigen Loading of Class II Major Histocompatibility Complex Proteins by Targeting the Polymorphic P1 Pocket
journal, September 2006

  • Höpner, Sabine; Dickhaut, Katharina; Hofstätter, Maria
  • Journal of Biological Chemistry, Vol. 281, Issue 50
  • DOI: 10.1074/jbc.M606437200

The importance of hapten–protein complex formation in the development of drug allergy
journal, January 2014

  • Faulkner, Lee; Meng, Xiaoli; Park, B. Kevin
  • Current Opinion in Allergy and Clinical Immunology, Vol. 14, Issue 4
  • DOI: 10.1097/ACI.0000000000000078

Ligand Exchange of Major Histocompatibility Complex Class II Proteins Is Triggered by H-bond Donor Groups of Small Molecules
journal, October 2001

  • Falk, Kirsten; Lau, Julie M.; Santambrogio, Laura
  • Journal of Biological Chemistry, Vol. 277, Issue 4
  • DOI: 10.1074/jbc.M109098200

PyPop update - a software pipeline for large-scale multilocus population genomics
journal, April 2007


Drug hypersensitivity caused by alteration of the MHC-presented self-peptide repertoire
journal, May 2012

  • Ostrov, D. A.; Grant, B. J.; Pompeu, Y. A.
  • Proceedings of the National Academy of Sciences, Vol. 109, Issue 25
  • DOI: 10.1073/pnas.1207934109

Pharmacological Interaction of Drugs with Immune Receptors: The p-i Concept
journal, January 2006

  • Pichler, Werner J.; Beeler, Andreas; Keller, Monika
  • Allergology International, Vol. 55, Issue 1
  • DOI: 10.2332/allergolint.55.17

Assessing skin sensitization hazard in mice and men using non-animal test methods
journal, March 2015

  • Urbisch, Daniel; Mehling, Annette; Guth, Katharina
  • Regulatory Toxicology and Pharmacology, Vol. 71, Issue 2
  • DOI: 10.1016/j.yrtph.2014.12.008

The burden of skin diseases: 2004
journal, September 2006

  • Bickers, David R.; Lim, Henry W.; Margolis, David
  • Journal of the American Academy of Dermatology, Vol. 55, Issue 3
  • DOI: 10.1016/j.jaad.2006.05.048

Successful Translation of Pharmacogenetics into the Clinic: The Abacavir Example
journal, March 2009

  • Phillips, Elizabeth; Mallal, Simon
  • Molecular Diagnosis & Therapy, Vol. 13, Issue 1
  • DOI: 10.1007/BF03256308

In Vivo Enhancement of Peptide Display by MHC Class II Molecules with Small Molecule Catalysts of Peptide Exchange
journal, May 2009

  • Call, Melissa J.; Xing, Xuechao; Cuny, Gregory D.
  • The Journal of Immunology, Vol. 182, Issue 10
  • DOI: 10.4049/jimmunol.0803464

The epidemiology of contact allergy in the general population – prevalence and main findings
journal, November 2007


Can currently available non-animal methods detect pre and pro-haptens relevant for skin sensitization?
journal, December 2016

  • Patlewicz, Grace; Casati, Silvia; Basketter, David A.
  • Regulatory Toxicology and Pharmacology, Vol. 82
  • DOI: 10.1016/j.yrtph.2016.08.007

Activation of non-sensitizing or low-sensitizing fragrance substances into potent sensitizers - prehaptens and prohaptens: (BIO)ACTIVATION OF FRAGRANCE SUBSTANCES
journal, September 2013

  • Karlberg, Ann-Therese; Börje, Anna; Duus Johansen, Jeanne
  • Contact Dermatitis, Vol. 69, Issue 6
  • DOI: 10.1111/cod.12127

Putting the parts together: Combining in vitro methods to test for skin sensitizing potentials
journal, August 2012

  • Bauch, Caroline; Kolle, Susanne N.; Ramirez, Tzutzuy
  • Regulatory Toxicology and Pharmacology, Vol. 63, Issue 3
  • DOI: 10.1016/j.yrtph.2012.05.013

Skin sensitization—A critical review of predictive test methods in animals and man
journal, January 1991


Characterization of Peroxidases Expressed in Human Antigen Presenting Cells and Analysis of the Covalent Binding of Nitroso Sulfamethoxazole to Myeloperoxidase
journal, December 2014

  • Ogese, Monday O.; Jenkins, Rosalind E.; Maggs, James L.
  • Chemical Research in Toxicology, Vol. 28, Issue 1
  • DOI: 10.1021/tx500458k

Assessment of Pre- and Pro-haptens Using Nonanimal Test Methods for Skin Sensitization
journal, April 2016


Chemical stability and in chemico reactivity of 24 fragrance ingredients of concern for skin sensitization risk assessment
journal, February 2018


Sensitization Methodology and Primary Prevention of the Research Institute for Fragrance Materials
journal, January 2002


CHUCKLES: A method for representing and searching peptide and peptoid sequences on both monomer and atomic levels
journal, May 1994

  • Siani, Michael A.; Weininger, David; Blaney, Jeffrey M.
  • Journal of Chemical Information and Modeling, Vol. 34, Issue 3
  • DOI: 10.1021/ci00019a017