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Title: Extending density functional embedding theory for covalently bonded systems

Abstract

Quantum embedding theory aims to provide an efficient solution to obtain accurate electronic energies for systems too large for full-scale, high-level quantum calculations. It adopts a hierarchical approach that divides the total system into a small embedded region and a larger environment, using different levels of theory to describe each part. Previously, we developed a density-based quantum embedding theory called density functional embedding theory (DFET), which achieved considerable success in metals and semiconductors. In this work, we extend DFET into a density-matrix–based nonlocal form, enabling DFET to study the stronger quantum couplings between covalently bonded subsystems. We name this theory density-matrix functional embedding theory (DMFET), and we demonstrate its performance in several test examples that resemble various real applications in both chemistry and biochemistry. DMFET gives excellent results in all cases tested thus far, including predicting isomerization energies, proton transfer energies, and highest occupied molecular orbital–lowest unoccupied molecular orbital gaps for local chromophores. Here, we show that DMFET systematically improves the quality of the results compared with the widely used state-of-the-art methods, such as the simple capped cluster model or the widely used ONIOM method.

Authors:
 [1]; ORCiD logo [2]
  1. Department of Mechanical and Aerospace Engineering, Princeton University, Princeton, NJ 08544-5263,
  2. School of Engineering and Applied Science, Princeton University, Princeton, NJ 08544-5263
Publication Date:
Research Org.:
Princeton Univ., NJ (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
OSTI Identifier:
1411118
Alternate Identifier(s):
OSTI ID: 1527122
Grant/Contract Number:  
SC0002120
Resource Type:
Published Article
Journal Name:
Proceedings of the National Academy of Sciences of the United States of America
Additional Journal Information:
Journal Name: Proceedings of the National Academy of Sciences of the United States of America Journal Volume: 114 Journal Issue: 51; Journal ID: ISSN 0027-8424
Publisher:
Proceedings of the National Academy of Sciences
Country of Publication:
United States
Language:
English
Subject:
42 ENGINEERING

Citation Formats

Yu, Kuang, and Carter, Emily A. Extending density functional embedding theory for covalently bonded systems. United States: N. p., 2017. Web. doi:10.1073/pnas.1712611114.
Yu, Kuang, & Carter, Emily A. Extending density functional embedding theory for covalently bonded systems. United States. https://doi.org/10.1073/pnas.1712611114
Yu, Kuang, and Carter, Emily A. Mon . "Extending density functional embedding theory for covalently bonded systems". United States. https://doi.org/10.1073/pnas.1712611114.
@article{osti_1411118,
title = {Extending density functional embedding theory for covalently bonded systems},
author = {Yu, Kuang and Carter, Emily A.},
abstractNote = {Quantum embedding theory aims to provide an efficient solution to obtain accurate electronic energies for systems too large for full-scale, high-level quantum calculations. It adopts a hierarchical approach that divides the total system into a small embedded region and a larger environment, using different levels of theory to describe each part. Previously, we developed a density-based quantum embedding theory called density functional embedding theory (DFET), which achieved considerable success in metals and semiconductors. In this work, we extend DFET into a density-matrix–based nonlocal form, enabling DFET to study the stronger quantum couplings between covalently bonded subsystems. We name this theory density-matrix functional embedding theory (DMFET), and we demonstrate its performance in several test examples that resemble various real applications in both chemistry and biochemistry. DMFET gives excellent results in all cases tested thus far, including predicting isomerization energies, proton transfer energies, and highest occupied molecular orbital–lowest unoccupied molecular orbital gaps for local chromophores. Here, we show that DMFET systematically improves the quality of the results compared with the widely used state-of-the-art methods, such as the simple capped cluster model or the widely used ONIOM method.},
doi = {10.1073/pnas.1712611114},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
number = 51,
volume = 114,
place = {United States},
year = {Mon Dec 04 00:00:00 EST 2017},
month = {Mon Dec 04 00:00:00 EST 2017}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1073/pnas.1712611114

Citation Metrics:
Cited by: 19 works
Citation information provided by
Web of Science

Figures / Tables:

Fig. 1 Fig. 1: Structures of cis– and trans–2-methyl-1,3,5-hexatriene, shown alongside retinal for comparison. The 2-methyl-1,3,5-hexatriene is the model molecule representing the central part of retinal encompassed in the dashed boxes. The ethenyl group within the blue boxes is treated as the environment in the ONIOM and DMFET calculations.

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