DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential

Abstract

The C-terminal guanine nucleotide exchange factor (GEF) module of Trio (TrioC) transfers signals from the Gαq/11 subfamily of heterotrimeric G proteins to the small guanosine triphosphatase (GTPase) RhoA, enabling Gαq/11-coupled G protein–coupled receptors (GPCRs) to control downstream events, such as cell motility and gene transcription. This conserved signal transduction axis is crucial for tumor growth in uveal melanoma. Prior studies indicate that the GEF activity of the TrioC module is autoinhibited, with release of autoinhibition upon Gαq/11 binding. Here, we determined the crystal structure of TrioC in its basal state and found that the pleckstrin homology (PH) domain interacts with the Dbl homology (DH) domain in a manner that occludes the Rho GTPase binding site, thereby suggesting the molecular basis of TrioC autoinhibition. Biochemical and biophysical assays revealed that disruption of the autoinhibited conformation destabilized and activated the TrioC module in vitro. Last, mutations in the DH-PH interface found in patients with cancer activated TrioC and, in the context of full-length Trio, led to increased abundance of guanosine triphosphate–bound RhoA (RhoA·GTP) in human cells. These mutations increase mitogenic signaling through the RhoA axis and, therefore, may represent cancer drivers operating in a Gαq/11-independent manner.

Authors:
ORCiD logo [1]; ORCiD logo [2];  [1];  [1];  [1]; ORCiD logo [2]; ORCiD logo [2]; ORCiD logo [3]
  1. Univ. of Michigan, Ann Arbor, MI (United States)
  2. Univ. of California, San Diego, La Jolla, CA (United States)
  3. Purdue Univ., West Lafayette, IN (United States)
Publication Date:
Research Org.:
Argonne National Laboratory (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Org.:
USDOE Office of Science (SC); National Institutes of Health (NIH); Michigan Economic Development Corporation and the Michigan Technology Tri-Corridor
OSTI Identifier:
1513007
Grant/Contract Number:  
CA221289; HL122416; HL071818; 5T32GM007767-38; 5T32GM007767-39; F31CA224804; 1U19AI117905; R01GM020501; R01NS070899; R01GM121964; 5T32GM007752-39; AC02-06CH11357; 085P1000817
Resource Type:
Accepted Manuscript
Journal Name:
Science Signaling
Additional Journal Information:
Journal Volume: 12; Journal Issue: 569; Journal ID: ISSN 1945-0877
Publisher:
AAAS
Country of Publication:
United States
Language:
ENGLISH
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Bandekar, Sumit J., Arang, Nadia, Tully, Ena S., Tang, Brittany A., Barton, Brenna L., Li, Sheng, Gutkind, J. Silvio, and Tesmer, John J. G. Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential. United States: N. p., 2019. Web. doi:10.1126/scisignal.aav2449.
Bandekar, Sumit J., Arang, Nadia, Tully, Ena S., Tang, Brittany A., Barton, Brenna L., Li, Sheng, Gutkind, J. Silvio, & Tesmer, John J. G. Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential. United States. https://doi.org/10.1126/scisignal.aav2449
Bandekar, Sumit J., Arang, Nadia, Tully, Ena S., Tang, Brittany A., Barton, Brenna L., Li, Sheng, Gutkind, J. Silvio, and Tesmer, John J. G. Tue . "Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential". United States. https://doi.org/10.1126/scisignal.aav2449. https://www.osti.gov/servlets/purl/1513007.
@article{osti_1513007,
title = {Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential},
author = {Bandekar, Sumit J. and Arang, Nadia and Tully, Ena S. and Tang, Brittany A. and Barton, Brenna L. and Li, Sheng and Gutkind, J. Silvio and Tesmer, John J. G.},
abstractNote = {The C-terminal guanine nucleotide exchange factor (GEF) module of Trio (TrioC) transfers signals from the Gαq/11 subfamily of heterotrimeric G proteins to the small guanosine triphosphatase (GTPase) RhoA, enabling Gαq/11-coupled G protein–coupled receptors (GPCRs) to control downstream events, such as cell motility and gene transcription. This conserved signal transduction axis is crucial for tumor growth in uveal melanoma. Prior studies indicate that the GEF activity of the TrioC module is autoinhibited, with release of autoinhibition upon Gαq/11 binding. Here, we determined the crystal structure of TrioC in its basal state and found that the pleckstrin homology (PH) domain interacts with the Dbl homology (DH) domain in a manner that occludes the Rho GTPase binding site, thereby suggesting the molecular basis of TrioC autoinhibition. Biochemical and biophysical assays revealed that disruption of the autoinhibited conformation destabilized and activated the TrioC module in vitro. Last, mutations in the DH-PH interface found in patients with cancer activated TrioC and, in the context of full-length Trio, led to increased abundance of guanosine triphosphate–bound RhoA (RhoA·GTP) in human cells. These mutations increase mitogenic signaling through the RhoA axis and, therefore, may represent cancer drivers operating in a Gαq/11-independent manner.},
doi = {10.1126/scisignal.aav2449},
journal = {Science Signaling},
number = 569,
volume = 12,
place = {United States},
year = {Tue Feb 19 00:00:00 EST 2019},
month = {Tue Feb 19 00:00:00 EST 2019}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record

Citation Metrics:
Cited by: 15 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

RHO–GTPases and cancer
journal, February 2002

  • Sahai, Erik; Marshall, Christopher J.
  • Nature Reviews Cancer, Vol. 2, Issue 2
  • DOI: 10.1038/nrc725

Rho GTPases in cancer cell biology
journal, May 2008


The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data: Figure 1.
journal, May 2012


Selumetinib in Combination With Dacarbazine in Patients With Metastatic Uveal Melanoma: A Phase III, Multicenter, Randomized Trial (SUMIT)
journal, April 2018

  • Carvajal, Richard D.; Piperno-Neumann, Sophie; Kapiteijn, Ellen
  • Journal of Clinical Oncology, Vol. 36, Issue 12
  • DOI: 10.1200/JCO.2017.74.1090

Overview of the CCP 4 suite and current developments
journal, March 2011

  • Winn, Martyn D.; Ballard, Charles C.; Cowtan, Kevin D.
  • Acta Crystallographica Section D Biological Crystallography, Vol. 67, Issue 4
  • DOI: 10.1107/S0907444910045749

Crystal Structure of the Dbl and Pleckstrin Homology Domains from the Human Son of Sevenless Protein
journal, October 1998


Structure of the Regulator of G Protein Signaling 8 (RGS8)-Gα q Complex : MOLECULAR BASIS FOR Gα SELECTIVITY
journal, January 2016

  • Taylor, Veronica G.; Bommarito, Paige A.; Tesmer, John J. G.
  • Journal of Biological Chemistry, Vol. 291, Issue 10
  • DOI: 10.1074/jbc.M115.712075

Structure and Function of Heterotrimeric G Protein-Regulated Rho Guanine Nucleotide Exchange Factors
journal, October 2009

  • Aittaleb, Mohamed; Boguth, Cassandra A.; Tesmer, John J. G.
  • Molecular Pharmacology, Vol. 77, Issue 2
  • DOI: 10.1124/mol.109.061234

Function and regulation of the Rho guanine nucleotide exchange factor Trio
journal, October 2014


An Alternative Transcript Derived from the Trio Locus Encodes a Guanosine Nucleotide Exchange Factor with Mouse Cell-transforming Potential
journal, August 2004

  • Yoshizuka, Naoto; Moriuchi, Ryozo; Mori, Tsuyoshi
  • Journal of Biological Chemistry, Vol. 279, Issue 42
  • DOI: 10.1074/jbc.M406082200

Regulation of Small GTPases by GEFs, GAPs, and GDIs
journal, January 2013


Structure of G q-p63RhoGEF-RhoA Complex Reveals a Pathway for the Activation of RhoA by GPCRs
journal, December 2007


A Genome-wide RNAi Screen Reveals a Trio-Regulated Rho GTPase Circuitry Transducing Mitogenic Signals Initiated by G Protein-Coupled Receptors
journal, January 2013


Hippo-Independent Activation of YAP by the GNAQ Uveal Melanoma Oncogene through a Trio-Regulated Rho GTPase Signaling Circuitry
journal, June 2014

  • Feng, Xiaodong; Degese, Maria Sol; Iglesias-Bartolome, Ramiro
  • Cancer Cell, Vol. 25, Issue 6
  • DOI: 10.1016/j.ccr.2014.04.016

A crystallographic view of interactions between Dbs and Cdc42: PH domain-assisted guanine nucleotide exchange
journal, March 2002

  • Rossman, Kent L.; Worthylake, David K.; Snyder, Jason T.
  • The EMBO Journal, Vol. 21, Issue 6
  • DOI: 10.1093/emboj/21.6.1315

Trio's Rho-specific GEF domain is the missing G q effector in C. elegans
journal, November 2007

  • Williams, S. L.; Lutz, S.; Charlie, N. K.
  • Genes & Development, Vol. 21, Issue 21
  • DOI: 10.1101/gad.1592007

GEF means go: turning on RHO GTPases with guanine nucleotide-exchange factors
journal, February 2005

  • Rossman, Kent L.; Der, Channing J.; Sondek, John
  • Nature Reviews Molecular Cell Biology, Vol. 6, Issue 2
  • DOI: 10.1038/nrm1587

PHENIX: a comprehensive Python-based system for macromolecular structure solution
journal, January 2010

  • Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
  • Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221
  • DOI: 10.1107/S0907444909052925

Mutations in GNA11 in Uveal Melanoma
journal, December 2010

  • Van Raamsdonk, Catherine D.; Griewank, Klaus G.; Crosby, Michelle B.
  • New England Journal of Medicine, Vol. 363, Issue 23
  • DOI: 10.1056/NEJMoa1000584

q Directly Activates p63RhoGEF and Trio via a Conserved Extension of the Dbl Homology-associated Pleckstrin Homology Domain
journal, July 2007

  • Rojas, Rafael J.; Yohe, Marielle E.; Gershburg, Svetlana
  • Journal of Biological Chemistry, Vol. 282, Issue 40
  • DOI: 10.1074/jbc.M703458200

Coupling of Ras and Rac Guanosine Triphosphatases Through the Ras Exchanger Sos
journal, January 1998


Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega
journal, January 2011

  • Sievers, Fabian; Wilm, Andreas; Dineen, David
  • Molecular Systems Biology, Vol. 7, Issue 1
  • DOI: 10.1038/msb.2011.75

Tgat, a Rho-specific guanine nucleotide exchange factor, activates NF-κB via physical association with IκB kinase complexes
journal, March 2007

  • Yamada, Kenji; Moriuchi, Ryozo; Mori, Tsuyoshi
  • Biochemical and Biophysical Research Communications, Vol. 355, Issue 1
  • DOI: 10.1016/j.bbrc.2007.01.147

Enhancing Recombinant Protein Quality and Yield by Protein Stability Profiling
journal, April 2007

  • Mezzasalma, Tara M.; Kranz, James K.; Chan, Winnie
  • Journal of Biomolecular Screening, Vol. 12, Issue 3
  • DOI: 10.1177/1087057106297984

Molecular Mechanisms of Phospholipase C β3 Autoinhibition
journal, December 2014


Tgat oncoprotein functions as a inhibitor of RECK by association of the unique C-terminal region
journal, April 2007

  • Mori, Tsuyoshi; Moriuchi, Ryozo; Okazaki, Eiko
  • Biochemical and Biophysical Research Communications, Vol. 355, Issue 4
  • DOI: 10.1016/j.bbrc.2007.02.051

Structural and Biochemical Characterization of the Catalytic Core of the Metastatic Factor P-Rex1 and Its Regulation by PtdIns(3,4,5)P3
journal, May 2016


[20] Processing of X-ray diffraction data collected in oscillation mode
book, January 1997


Gαq allosterically activates and relieves autoinhibition of p63RhoGEF
journal, July 2010


Structural Determinants of RhoA Binding and Nucleotide Exchange in Leukemia-associated Rho Guanine-Nucleotide Exchange Factor
journal, August 2004

  • Kristelly, Romana; Gao, Guang; Tesmer, John J. G.
  • Journal of Biological Chemistry, Vol. 279, Issue 45
  • DOI: 10.1074/jbc.M406056200

The DH and PH Domains of Trio Coordinately Engage Rho GTPases for their Efficient Activation
journal, May 2007

  • Chhatriwala, Mariya K.; Betts, Laurie; Worthylake, David K.
  • Journal of Molecular Biology, Vol. 368, Issue 5
  • DOI: 10.1016/j.jmb.2007.02.060

Frequent somatic mutations of GNAQ in uveal melanoma and blue naevi
journal, December 2008

  • Van Raamsdonk, Catherine D.; Bezrookove, Vladimir; Green, Gary
  • Nature, Vol. 457, Issue 7229
  • DOI: 10.1038/nature07586

Crystal Structure of the DH/PH Fragment of Dbs without Bound GTPase
journal, June 2004


Crystal Structure of G Protein-coupled Receptor Kinase 5 in Complex with a Rationally Designed Inhibitor
journal, June 2015

  • Homan, Kristoff T.; Waldschmidt, Helen V.; Glukhova, Alisa
  • Journal of Biological Chemistry, Vol. 290, Issue 34
  • DOI: 10.1074/jbc.M115.647370

Exploring the gas access routes in a [NiFeSe] hydrogenase using crystals pressurized with krypton and oxygen
journal, August 2020

  • Zacarias, Sónia; Temporão, Adriana; Carpentier, Philippe
  • JBIC Journal of Biological Inorganic Chemistry, Vol. 25, Issue 6
  • DOI: 10.1007/s00775-020-01814-y

PARP1 exhibits enhanced association and catalytic efficiency with γH2A.X-nucleosome
journal, December 2019


Cavin1 intrinsically disordered domains are essential for fuzzy electrostatic interactions and caveola formation
journal, February 2021


A genomic and epigenomic atlas of prostate cancer in Asian populations
journal, March 2020


A crystallographic view of interactions between Dbs and Cdc42: PH domain-assisted guanine nucleotide exchange
text, January 2002

  • L., Campbell, Sharon; P., Siderovski, David; K., Worthylake, David
  • The University of North Carolina at Chapel Hill University Libraries
  • DOI: 10.17615/v2fh-k627

The DH and PH Domains of Trio Coordinately Engage Rho GTPases for their Efficient Activation
text, January 2007

  • K., Worthylake, David; Laurie, Betts,; K., Chhatriwala, Mariya
  • The University of North Carolina at Chapel Hill University Libraries
  • DOI: 10.17615/web4-s082

Overview of the CCP4 suite and current developments.
text, January 2011

  • Winn, Martyn D.; Ballard, Charles C.; Cowtan, Kevin D.
  • Apollo - University of Cambridge Repository
  • DOI: 10.17863/cam.52322

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
text, January 2010

  • Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
  • Apollo - University of Cambridge Repository
  • DOI: 10.17863/cam.45787

Works referencing / citing this record:

Rac-GEF/Rac Signaling and Metastatic Dissemination in Lung Cancer
journal, February 2020

  • Cooke, Mariana; Baker, Martin J.; Kazanietz, Marcelo G.
  • Frontiers in Cell and Developmental Biology, Vol. 8
  • DOI: 10.3389/fcell.2020.00118