DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: The relationship between Mn oxidation state and structure in triclinic and hexagonal birnessites

Abstract

Because of their nanocrystallinity and high cation exchange capacities, birnessite phases can control the cycling of heavy metals in soils and groundwaters, and they also are implicated in the oxidation of transition metals in natural environments. Birnessite reactivity is determined by crystal structure and composition. Because birnessites typically are poorly crystalline, synchrotron-based absorption spectroscopy (EXAFS, XANES) often is utilized for structural characterization. For example, linear combination fitting (LCF) of X-ray absorption spectra typically is applied to quantify mixed triclinic and hexagonal birnessite phases. This approach is challenged, however, because the structures of the standards are not always plainly apparent. Moreover, it is difficult to distinguish birnessites with nanoscale intergrowths of hexagonal and triclinic endmembers from homogeneous birnessite structures of “intermediate triclinicity”. In this study, we explored these issues by synthesizing a host of cation-exchanged birnessite specimens whose long-range symmetrical character could be determined by X-ray diffraction without ambiguity. Through a combination of Fourier transform infrared spectroscopy (FTIR), extended X-ray absorption fine structure (EXAFS), and X-ray photoelectron spectroscopy (XPS), we have examined the relationships among structural symmetry, Mn oxidation state, and interlayer composition. Our results confirm prior models that as the concentration of Mn3+ increases, the departure from hexagonal symmetry alsomore » increases. Rietveld refinements indicate that the Jahn-Teller distortions associated with Mn3+ induce systematic variations in unit-cell parameters, particularly an increase in the α-axis and the β angle of the unit cell. Interlayer cation composition also controls structural distortions, and Ca-rich birnessites showed less deviation from hexagonality than did Na-, K-, and Ba-birnessites. Our linear combination fits of X-ray absorption spectra sometimes yielded misleading results, reinforcing the difficulty and importance of selecting appropriate standards.« less

Authors:
ORCiD logo [1];  [2];  [1];  [3]
  1. Pennsylvania State Univ., University Park, PA (United States)
  2. Smithsonian Inst., Washington, DC (United States)
  3. Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
Publication Date:
Research Org.:
Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Environmental Molecular Sciences Lab. (EMSL); Argonne National Lab. (ANL), Argonne, IL (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Chemical Sciences, Geosciences & Biosciences Division; USDOE Office of Science (SC), Biological and Environmental Research (BER); National Science Foundation (NSF); USDOE Office of Science (SC), Basic Energy Sciences (BES)
OSTI Identifier:
1773815
Alternate Identifier(s):
OSTI ID: 1506722
Report Number(s):
PNNL-SA-135583
Journal ID: ISSN 0009-2541
Grant/Contract Number:  
AC05-76RL01830; AC02-06CH11357; EAR-1147728; EAR-1552211; AC06-76RLO-1830
Resource Type:
Accepted Manuscript
Journal Name:
Chemical Geology
Additional Journal Information:
Journal Volume: 479; Journal ID: ISSN 0009-2541
Publisher:
Elsevier
Country of Publication:
United States
Language:
English
Subject:
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY; 58 GEOSCIENCES; birnessite; manganese oxide; triclinic; hexagonal; Mn oxidation state; FTIR; EXAFS; XRD; XPS

Citation Formats

Ling, Florence T., Post, Jeffrey E., Heaney, Peter J., and Ilton, Eugene S. The relationship between Mn oxidation state and structure in triclinic and hexagonal birnessites. United States: N. p., 2018. Web. doi:10.1016/j.chemgeo.2018.01.011.
Ling, Florence T., Post, Jeffrey E., Heaney, Peter J., & Ilton, Eugene S. The relationship between Mn oxidation state and structure in triclinic and hexagonal birnessites. United States. https://doi.org/10.1016/j.chemgeo.2018.01.011
Ling, Florence T., Post, Jeffrey E., Heaney, Peter J., and Ilton, Eugene S. Wed . "The relationship between Mn oxidation state and structure in triclinic and hexagonal birnessites". United States. https://doi.org/10.1016/j.chemgeo.2018.01.011. https://www.osti.gov/servlets/purl/1773815.
@article{osti_1773815,
title = {The relationship between Mn oxidation state and structure in triclinic and hexagonal birnessites},
author = {Ling, Florence T. and Post, Jeffrey E. and Heaney, Peter J. and Ilton, Eugene S.},
abstractNote = {Because of their nanocrystallinity and high cation exchange capacities, birnessite phases can control the cycling of heavy metals in soils and groundwaters, and they also are implicated in the oxidation of transition metals in natural environments. Birnessite reactivity is determined by crystal structure and composition. Because birnessites typically are poorly crystalline, synchrotron-based absorption spectroscopy (EXAFS, XANES) often is utilized for structural characterization. For example, linear combination fitting (LCF) of X-ray absorption spectra typically is applied to quantify mixed triclinic and hexagonal birnessite phases. This approach is challenged, however, because the structures of the standards are not always plainly apparent. Moreover, it is difficult to distinguish birnessites with nanoscale intergrowths of hexagonal and triclinic endmembers from homogeneous birnessite structures of “intermediate triclinicity”. In this study, we explored these issues by synthesizing a host of cation-exchanged birnessite specimens whose long-range symmetrical character could be determined by X-ray diffraction without ambiguity. Through a combination of Fourier transform infrared spectroscopy (FTIR), extended X-ray absorption fine structure (EXAFS), and X-ray photoelectron spectroscopy (XPS), we have examined the relationships among structural symmetry, Mn oxidation state, and interlayer composition. Our results confirm prior models that as the concentration of Mn3+ increases, the departure from hexagonal symmetry also increases. Rietveld refinements indicate that the Jahn-Teller distortions associated with Mn3+ induce systematic variations in unit-cell parameters, particularly an increase in the α-axis and the β angle of the unit cell. Interlayer cation composition also controls structural distortions, and Ca-rich birnessites showed less deviation from hexagonality than did Na-, K-, and Ba-birnessites. Our linear combination fits of X-ray absorption spectra sometimes yielded misleading results, reinforcing the difficulty and importance of selecting appropriate standards.},
doi = {10.1016/j.chemgeo.2018.01.011},
journal = {Chemical Geology},
number = ,
volume = 479,
place = {United States},
year = {Wed Jan 17 00:00:00 EST 2018},
month = {Wed Jan 17 00:00:00 EST 2018}
}

Journal Article:

Citation Metrics:
Cited by: 24 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

ATHENA , ARTEMIS , HEPHAESTUS : data analysis for X-ray absorption spectroscopy using IFEFFIT
journal, June 2005


Phase Transformations Induced by Solid Solution
journal, January 2000


Photochemical Water Oxidation by Crystalline Polymorphs of Manganese Oxides: Structural Requirements for Catalysis
journal, February 2013

  • Robinson, David M.; Go, Yong Bok; Mui, Michelle
  • Journal of the American Chemical Society, Vol. 135, Issue 9
  • DOI: 10.1021/ja310286h

A pre-edge analysis of Mn K-edge XANES spectra to help determine the speciation of manganese in minerals and glasses
journal, July 2008

  • Chalmin, E.; Farges, F.; Brown, G. E.
  • Contributions to Mineralogy and Petrology, Vol. 157, Issue 1
  • DOI: 10.1007/s00410-008-0323-z

A time-resolved X-ray diffraction study of Cs exchange into hexagonal H-birnessite
journal, March 2013

  • Fleeger, C. R.; Heaney, P. J.; Post, J. E.
  • American Mineralogist, Vol. 98, Issue 4
  • DOI: 10.2138/am.2013.4287

Manganese Oxides:  Parallels between Abiotic and Biotic Structures
journal, August 2006

  • Saratovsky, Ian; Wightman, Peter G.; Pastén, Pablo A.
  • Journal of the American Chemical Society, Vol. 128, Issue 34
  • DOI: 10.1021/ja062097g

Water-Splitting Chemistry of Photosystem II
journal, November 2006

  • McEvoy, James P.; Brudvig, Gary W.
  • Chemical Reviews, Vol. 106, Issue 11
  • DOI: 10.1021/cr0204294

Relationship between Pb<SUP>2+</SUP> adsorption and average Mn oxidation state in synthetic birnessites
journal, October 2009


Cation Effects on the Layer Structure of Biogenic Mn-Oxides
journal, June 2010

  • Zhu, Mengqiang; Ginder-Vogel, Matthew; Parikh, Sanjai J.
  • Environmental Science & Technology, Vol. 44, Issue 12
  • DOI: 10.1021/es1009955

Mn(II) oxidation by an ascomycete fungus is linked to superoxide production during asexual reproduction
journal, July 2012

  • Hansel, C. M.; Zeiner, C. A.; Santelli, C. M.
  • Proceedings of the National Academy of Sciences, Vol. 109, Issue 31
  • DOI: 10.1073/pnas.1203885109

Characterization of manganese oxide mineralogy in rock varnish and dendrites using X-ray absorption spectroscopy
journal, May 2001

  • McKeown, David A.; Post, Jeffrey E.
  • American Mineralogist, Vol. 86, Issue 5-6
  • DOI: 10.2138/am-2001-5-611

GSAS-II : the genesis of a modern open-source all purpose crystallography software package
journal, March 2013


Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å
journal, April 2011

  • Umena, Yasufumi; Kawakami, Keisuke; Shen, Jian-Ren
  • Nature, Vol. 473, Issue 7345
  • DOI: 10.1038/nature09913

A possible evolutionary origin for the Mn4 cluster of the photosynthetic water oxidation complex from natural MnO2 precipitates in the early ocean
journal, June 2002

  • Sauer, K.; Yachandra, V. K.
  • Proceedings of the National Academy of Sciences, Vol. 99, Issue 13
  • DOI: 10.1073/pnas.132266199

Rietveld refinement of the ranciéite structure using synchrotron powder diffraction data
journal, March 2008

  • Post, Jeffrey E.; Heaney, Peter J.; Ertl, Andreas
  • Powder Diffraction, Vol. 23, Issue 1
  • DOI: 10.1154/1.2836477

Manganese oxide minerals: Crystal structures and economic and environmental significance
journal, March 1999


Rietveld refinement of Debye–Scherrer synchrotron X-ray data from Al 2 O 3
journal, April 1987

  • Thompson, P.; Cox, D. E.; Hastings, J. B.
  • Journal of Applied Crystallography, Vol. 20, Issue 2
  • DOI: 10.1107/S0021889887087090

Behavior of Chromium in Soils: III. Oxidation
journal, January 1979


Zinc sorption to biogenic hexagonal-birnessite particles within a hydrated bacterial biofilm
journal, January 2006

  • Toner, Brandy; Manceau, Alain; Webb, Samuel M.
  • Geochimica et Cosmochimica Acta, Vol. 70, Issue 1
  • DOI: 10.1016/j.gca.2005.08.029

Mineral abundance determination: Quantitative deconvolution of thermal emission spectra
journal, January 1998

  • Ramsey, Michael S.; Christensen, Philip R.
  • Journal of Geophysical Research: Solid Earth, Vol. 103, Issue B1
  • DOI: 10.1029/97JB02784

The mid-infrared reflectance of mineral mixtures (7–14 μm)
journal, July 1993


Determination of Mn valence states in mixed-valent manganates by XANES spectroscopy
journal, May 2012

  • Manceau, A.; Marcus, M. A.; Grangeon, S.
  • American Mineralogist, Vol. 97, Issue 5-6
  • DOI: 10.2138/am.2012.3903

Architecture of the Photosynthetic Oxygen-Evolving Center
journal, March 2004


The oxidation state of manganese in marine sediments and ferromanganese nodules
journal, June 1984

  • Murray, James W.; Balistrieri, Laurie S.; Paul, Barbara
  • Geochimica et Cosmochimica Acta, Vol. 48, Issue 6
  • DOI: 10.1016/0016-7037(84)90058-9

Rietveld refinement of a triclinic structure for synthetic Na-birnessite using synchrotron powder diffraction data
journal, September 2002

  • Post, Jeffrey E.; Heaney, Peter J.; Hanson, Jonathan
  • Powder Diffraction, Vol. 17, Issue 3
  • DOI: 10.1154/1.1498279

Biotic and abiotic products of Mn(II) oxidation by spores of the marine Bacillus sp. strain SG-1
journal, January 2005

  • Bargar, John R.; Tebo, Bradley M.; Bergmann, Uwe
  • American Mineralogist, Vol. 90, Issue 1
  • DOI: 10.2138/am.2005.1557

Chromium(III) oxidation by .delta.-manganese oxide (MnO2). 1. Characterization
journal, January 1992

  • Fendorf, Scott E.; Zasoski, Robert J.
  • Environmental Science & Technology, Vol. 26, Issue 1
  • DOI: 10.1021/es00025a006

Time-Resolved Investigation of Cobalt Oxidation by Mn(III)-Rich δ-MnO 2 Using Quick X-ray Absorption Spectroscopy
journal, July 2015

  • Simanova, Anna A.; Peña, Jasquelin
  • Environmental Science & Technology, Vol. 49, Issue 18
  • DOI: 10.1021/acs.est.5b01088

Fourier transform infrared spectroscopy study of acid birnessites before and after Pb 2+ adsorption
journal, June 2012


The significance of secondary iron and manganese oxides in geochemical exploration
journal, December 1976


Mechanisms of pH-Dependent Activity for Water Oxidation to Molecular Oxygen by MnO 2 Electrocatalysts
journal, January 2012

  • Takashima, Toshihiro; Hashimoto, Kazuhito; Nakamura, Ryuhei
  • Journal of the American Chemical Society, Vol. 134, Issue 3
  • DOI: 10.1021/ja206511w

Structure of H-exchanged hexagonal birnessite and its mechanism of formation from Na-rich monoclinic buserite at low pH
journal, May 2000

  • Lanson, Bruno; Drits, Victor A.; Silvester, Ewen
  • American Mineralogist, Vol. 85, Issue 5-6
  • DOI: 10.2138/am-2000-5-625

Preparation and Characterization of Open Tunnel Oxide α-MnO2 Precipitated by Ozone Oxidation
journal, June 2001

  • Kijima, Norihito; Yasuda, Hiroyuki; Sato, Toshio
  • Journal of Solid State Chemistry, Vol. 159, Issue 1
  • DOI: 10.1006/jssc.2001.9136

Phenomenological model of anisotropic peak broadening in powder diffraction
journal, April 1999


Reactions at Oxide Surfaces. 2. Oxidation of Se(IV) by Synthetic Birnessite
journal, January 1996

  • Scott, Michael J.; Morgan, James J.
  • Environmental Science & Technology, Vol. 30, Issue 6
  • DOI: 10.1021/es950741d

Characterization of the manganese oxide produced by pseudomonas putida strain MnB1
journal, July 2003


Structural Influences of Sodium and Calcium Ions on the Biogenic Manganese Oxides Produced by the Marine Bacillus Sp., Strain SG-1
journal, April 2005


An improved oxalate method for the determination of active oxygen in manganese dioxide
journal, January 1971


Structure of synthetic monoclinic Na-rich birnessite and hexagonal birnessite; II, Results from chemical studies and EXAFS spectroscopy
journal, October 1997

  • Silvester, Ewen; Manceau, Alain; Drits, Victor A.
  • American Mineralogist, Vol. 82, Issue 9-10
  • DOI: 10.2138/am-1997-9-1013

Structural model for the biogenic Mn oxide produced by Pseudomonas putida
journal, April 2006

  • Villalobos, M.; Lanson, B.; Manceau, A.
  • American Mineralogist, Vol. 91, Issue 4
  • DOI: 10.2138/am.2006.1925

Uptake of cadmium, copper, and lead by microporous synthetic Na-birnessite
journal, November 2010


The mechanism of water oxidation catalyzed by nanolayered manganese oxides: New insights
journal, November 2015


Time-resolved structural analysis of K- and Ba-exchange reactions with synthetic Na-birnessite using synchrotron X-ray diffraction
journal, February 2007

  • Lopano, C. L.; Heaney, P. J.; Post, J. E.
  • American Mineralogist, Vol. 92, Issue 2-3
  • DOI: 10.2138/am.2007.2242

Inhibition of Charge Disproportionation of MnO 2 Electrocatalysts for Efficient Water Oxidation under Neutral Conditions
journal, October 2012

  • Takashima, Toshihiro; Hashimoto, Kazuhito; Nakamura, Ryuhei
  • Journal of the American Chemical Society, Vol. 134, Issue 44
  • DOI: 10.1021/ja306499n

A correction for powder diffraction peak asymmetry due to axial divergence
journal, December 1994

  • Finger, L. W.; Cox, D. E.; Jephcoat, A. P.
  • Journal of Applied Crystallography, Vol. 27, Issue 6
  • DOI: 10.1107/S0021889894004218

A profile refinement method for nuclear and magnetic structures
journal, June 1969


The reactivity of seven Mn-oxides with Cr 3+ aq : A comparative analysis of a complex, environmentally important redox reaction
journal, November 2003


Synthesis of Todorokite
journal, February 1986


Constraints on superoxide mediated formation of manganese oxides
journal, January 2013

  • Learman, Deric R.; Voelker, Bettina M.; Madden, Andrew S.
  • Frontiers in Microbiology, Vol. 4
  • DOI: 10.3389/fmicb.2013.00262

The oxidation of cobalt(II) adsorbed on manganese dioxide
journal, May 1979


Fourier-transform infrared spectroscopy (FTIR) analysis of triclinic and hexagonal birnessites
journal, May 2017

  • Ling, Florence T.; Post, Jeffrey E.; Heaney, Peter J.
  • Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, Vol. 178
  • DOI: 10.1016/j.saa.2017.01.032

Works referencing / citing this record:

Electrodeposited Manganese Oxide on Tailored 3D Bimetallic Nanofoams for Energy Storage Applications
journal, April 2019

  • Siwek, Katarzyna Irena; Eugénio, Sónia; Silva, Teresa M.
  • Energy Technology, Vol. 7, Issue 5
  • DOI: 10.1002/ente.201801139

Coupled morphological and structural evolution of δ-MnO 2 to α-MnO 2 through multistage oriented assembly processes: the role of Mn( iii )
journal, January 2020

  • Liang, Xinran; Post, Jeffrey E.; Lanson, Bruno
  • Environmental Science: Nano, Vol. 7, Issue 1
  • DOI: 10.1039/c9en01000a