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Title: Water-stress-induced breakdown of carbon–water relations: indicators from diurnal FLUXNET patterns

Abstract

Understanding of terrestrial carbon and water cycles is currently hampered by an uncertainty in how to capture the large variety of plant responses to drought. In FLUXNET, the global network of CO2 and H2O flux observations, many sites do not uniformly report the ancillary variables needed to study drought response physiology. To this end, we outline two data-driven indicators based on diurnal energy, water, and carbon flux patterns derived directly from the eddy covariance data and based on theorized physiological responses to hydraulic and non-stomatal limitations.Hydraulic limitations (i.e. intra-plant limitations on water movement) are proxied using the relative diurnal centroid ( C ET * ), whichmeasures the degree to which the flux of evapotranspiration (ET) is shiftedtoward the morning. Non-stomatal limitations (e.g. inhibitions of biochemical reactions, RuBisCO activity, and/or mesophyll conductance) are characterized by the Diurnal Water–Carbon Index (DWCI), which measures the degree of coupling between ET and gross primary productivity (GPP) within each day.As a proof of concept we show the response of the metrics at six European sites during the 2003 heat wave event, showing a varied response of morning shifts and decoupling. Globally, we found indications of hydraulic limitations in the form of significantly high frequencies of morning-shifted days in dry/Mediterranean climates and savanna/evergreen plant functional types (PFTs), whereas high frequencies of decoupling were dominated by dry climates and grassland/savanna PFTs indicating a prevalence of non-stomatal limitations in these ecosystems. Wholly, both the diurnal centroid and DWCI were associated with high net radiation and low latent energy typical of drought. Using three water use efficiency (WUE) models, we found the mean differences between expected and observed WUE to be -0.09 to0.44µmolmmol-1 and -0.29 to -0.40µmolmmol-1 for decoupled and morning-shifted days, respectively, compared to mean differences -1.41 to -1.42µmol mmol-1 in dry conditions, suggesting that morning shifts/hydraulic responses are associated with an increase in WUE,whereas decoupling/non-stomatal limitations are not.

Authors:
 [1];  [2];  [1];  [3];  [1]
  1. Max Planck Society, Jena (Germany). Max Planck Inst. for Biogeochemistry
  2. Max Planck Society, Jena (Germany). Max Planck Inst. for Biogeochemistry; Univ. of Lisbon, Lisbon (Portugal)
  3. Max Planck Society, Jena (Germany). Max Planck Inst. for Biogeochemistry; Michael Stifel Center Jena for Data-Driven and Simulation Science, Jena (Germany)
Publication Date:
Research Org.:
Oregon State Univ., Corvallis, OR (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
OSTI Identifier:
1503311
Grant/Contract Number:  
FG02-04ER63911; FG02-04ER63917
Resource Type:
Accepted Manuscript
Journal Name:
Biogeosciences (Online)
Additional Journal Information:
Journal Name: Biogeosciences (Online); Journal Volume: 15; Journal Issue: 8; Journal ID: ISSN 1726-4189
Publisher:
European Geosciences Union
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; 58 GEOSCIENCES

Citation Formats

Nelson, Jacob A., Carvalhais, Nuno, Migliavacca, Mirco, Reichstein, Markus, and Jung, Martin. Water-stress-induced breakdown of carbon–water relations: indicators from diurnal FLUXNET patterns. United States: N. p., 2018. Web. doi:10.5194/bg-15-2433-2018.
Nelson, Jacob A., Carvalhais, Nuno, Migliavacca, Mirco, Reichstein, Markus, & Jung, Martin. Water-stress-induced breakdown of carbon–water relations: indicators from diurnal FLUXNET patterns. United States. https://doi.org/10.5194/bg-15-2433-2018
Nelson, Jacob A., Carvalhais, Nuno, Migliavacca, Mirco, Reichstein, Markus, and Jung, Martin. Fri . "Water-stress-induced breakdown of carbon–water relations: indicators from diurnal FLUXNET patterns". United States. https://doi.org/10.5194/bg-15-2433-2018. https://www.osti.gov/servlets/purl/1503311.
@article{osti_1503311,
title = {Water-stress-induced breakdown of carbon–water relations: indicators from diurnal FLUXNET patterns},
author = {Nelson, Jacob A. and Carvalhais, Nuno and Migliavacca, Mirco and Reichstein, Markus and Jung, Martin},
abstractNote = {Understanding of terrestrial carbon and water cycles is currently hampered by an uncertainty in how to capture the large variety of plant responses to drought. In FLUXNET, the global network of CO2 and H2O flux observations, many sites do not uniformly report the ancillary variables needed to study drought response physiology. To this end, we outline two data-driven indicators based on diurnal energy, water, and carbon flux patterns derived directly from the eddy covariance data and based on theorized physiological responses to hydraulic and non-stomatal limitations.Hydraulic limitations (i.e. intra-plant limitations on water movement) are proxied using the relative diurnal centroid (CET*), whichmeasures the degree to which the flux of evapotranspiration (ET) is shiftedtoward the morning. Non-stomatal limitations (e.g. inhibitions of biochemical reactions, RuBisCO activity, and/or mesophyll conductance) are characterized by the Diurnal Water–Carbon Index (DWCI), which measures the degree of coupling between ET and gross primary productivity (GPP) within each day.As a proof of concept we show the response of the metrics at six European sites during the 2003 heat wave event, showing a varied response of morning shifts and decoupling. Globally, we found indications of hydraulic limitations in the form of significantly high frequencies of morning-shifted days in dry/Mediterranean climates and savanna/evergreen plant functional types (PFTs), whereas high frequencies of decoupling were dominated by dry climates and grassland/savanna PFTs indicating a prevalence of non-stomatal limitations in these ecosystems. Wholly, both the diurnal centroid and DWCI were associated with high net radiation and low latent energy typical of drought. Using three water use efficiency (WUE) models, we found the mean differences between expected and observed WUE to be -0.09 to0.44µmolmmol-1 and -0.29 to -0.40µmolmmol-1 for decoupled and morning-shifted days, respectively, compared to mean differences -1.41 to -1.42µmol mmol-1 in dry conditions, suggesting that morning shifts/hydraulic responses are associated with an increase in WUE,whereas decoupling/non-stomatal limitations are not.},
doi = {10.5194/bg-15-2433-2018},
journal = {Biogeosciences (Online)},
number = 8,
volume = 15,
place = {United States},
year = {Fri Apr 20 00:00:00 EDT 2018},
month = {Fri Apr 20 00:00:00 EDT 2018}
}

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Works referenced in this record:

Temporal and among-site variability of inherent water use efficiency at the ecosystem level: VARIABILITY OF INHERENT WUE
journal, June 2009

  • Beer, C.; Ciais, P.; Reichstein, M.
  • Global Biogeochemical Cycles, Vol. 23, Issue 2
  • DOI: 10.1029/2008GB003233

Inverse modeling of seasonal drought effects on canopy CO 2 /H 2 O exchange in three Mediterranean ecosystems
journal, January 2003


Mesophyll diffusion conductance to CO2: An unappreciated central player in photosynthesis
journal, September 2012


Minimum hydraulic safety leads to maximum water-use efficiency in a forage grass: Minimum hydraulic safety, maximum water-use efficiency
journal, November 2010


How do leaf and ecosystem measures of water-use efficiency compare?
journal, June 2017

  • Medlyn, Belinda E.; De Kauwe, Martin G.; Lin, Yan-Shih
  • New Phytologist, Vol. 216, Issue 3
  • DOI: 10.1111/nph.14626

A quantitative assessment of a terrestrial biosphere model's data needs across North American biomes: PEcAn/ED model-data uncertainty analysis
journal, March 2014

  • Dietze, Michael C.; Serbin, Shawn P.; Davidson, Carl
  • Journal of Geophysical Research: Biogeosciences, Vol. 119, Issue 3
  • DOI: 10.1002/2013JG002392

Towards an improved and more flexible representation of water stress in coupled photosynthesis–stomatal conductance models
journal, October 2011


Seasonal and interannual patterns of carbon and water fluxes of a poplar plantation under peculiar eco-climatic conditions
journal, September 2009


Characterizing the diurnal patterns of errors in the prediction of evapotranspiration by several land-surface models: An NACP analysis: Error patterns in modeled transpiration
journal, July 2014

  • Matheny, Ashley M.; Bohrer, Gil; Stoy, Paul C.
  • Journal of Geophysical Research: Biogeosciences, Vol. 119, Issue 7
  • DOI: 10.1002/2014JG002623

Regression Quantiles
journal, January 1978

  • Koenker, Roger; Bassett, Gilbert
  • Econometrica, Vol. 46, Issue 1
  • DOI: 10.2307/1913643

Evaluating stomatal models and their atmospheric drought response in a land surface scheme: A multibiome analysis: MULTIBIOME STOMATAL MODEL EVALUATION
journal, October 2015

  • Knauer, Jürgen; Werner, Christiane; Zaehle, Sönke
  • Journal of Geophysical Research: Biogeosciences, Vol. 120, Issue 10
  • DOI: 10.1002/2015JG003114

Optimization of stomatal conductance for maximum carbon gain under dynamic soil moisture
journal, December 2013


A stomatal optimization theory to describe the effects of atmospheric CO2 on leaf photosynthesis and transpiration
journal, December 2009

  • Katul, Gabriel; Manzoni, Stefano; Palmroth, Sari
  • Annals of Botany, Vol. 105, Issue 3
  • DOI: 10.1093/aob/mcp292

On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm
journal, September 2005


Daily underlying water use efficiency for AmeriFlux sites: DAILY UNDERLYING WUE
journal, May 2015

  • Zhou, Sha; Yu, Bofu; Huang, Yuefei
  • Journal of Geophysical Research: Biogeosciences, Vol. 120, Issue 5
  • DOI: 10.1002/2015JG002947

Europe-wide reduction in primary productivity caused by the heat and drought in 2003
journal, September 2005


Surface energy balance closure by the eddy-covariance method above three boreal forest stands and implications for the measurement of the CO2 flux
journal, November 2006


Reflections on the surface energy imbalance problem
journal, April 2012


The effect of soil water content, soil temperature, soil pH-value and the root mass on soil CO2 efflux – A modified model
journal, January 2005


The importance of radiation for semiempirical water-use efficiency models
journal, January 2017


Severe drought effects on ecosystem CO2 and H2O fluxes at three Mediterranean evergreen sites: revision of current hypotheses?
journal, October 2002


Global variations in ecosystem-scale isohydricity
journal, July 2016

  • Konings, Alexandra G.; Gentine, Pierre
  • Global Change Biology, Vol. 23, Issue 2
  • DOI: 10.1111/gcb.13389

Integrating plant hydraulics and gas exchange along the drought-response trait spectrum
journal, October 2014


Evidence for soil water control on carbon and water dynamics in European forests during the extremely dry year: 2003
journal, March 2007


Leaf stomatal responses to vapour pressure deficit under current and CO 2 -enriched atmosphere explained by the economics of gas exchange
journal, August 2009


A new look at water transport regulation in plants
journal, July 2014

  • Martínez-Vilalta, Jordi; Poyatos, Rafael; Aguadé, David
  • New Phytologist, Vol. 204, Issue 1
  • DOI: 10.1111/nph.12912

The effect of vapor pressure deficit on water use efficiency at the subdaily time scale: Underlying water use efficiency
journal, July 2014

  • Zhou, Sha; Yu, Bofu; Huang, Yuefei
  • Geophysical Research Letters, Vol. 41, Issue 14
  • DOI: 10.1002/2014GL060741

Transpiration in the global water cycle
journal, June 2014


How should we model plant responses to drought? An analysis of stomatal and non-stomatal responses to water stress
journal, December 2013


Increase in forest water-use efficiency as atmospheric carbon dioxide concentrations rise
journal, July 2013

  • Keenan, Trevor F.; Hollinger, David Y.; Bohrer, Gil
  • Nature, Vol. 499, Issue 7458
  • DOI: 10.1038/nature12291

Partitioning evapotranspiration based on the concept of underlying water use efficiency: ET PARTITIONING
journal, February 2016

  • Zhou, Sha; Yu, Bofu; Zhang, Yao
  • Water Resources Research, Vol. 52, Issue 2
  • DOI: 10.1002/2015WR017766

An overview of models of stomatal conductance at the leaf level: Models of stomatal conductance
journal, July 2010


Drought limitations to leaf-level gas exchange: results from a model linking stomatal optimization and cohesion-tension theory: Drought limitations to gas exchange
journal, January 2016

  • Novick, Kimberly A.; Miniat, Chelcy F.; Vose, James M.
  • Plant, Cell & Environment, Vol. 39, Issue 3
  • DOI: 10.1111/pce.12657

Early-Morning Flow Transition in a Valley in Low-Mountain Terrain Under Clear-Sky Conditions
journal, April 2014

  • Brötz, Björn; Eigenmann, Rafael; Dörnbrack, Andreas
  • Boundary-Layer Meteorology, Vol. 152, Issue 1
  • DOI: 10.1007/s10546-014-9921-7

Characterisation of ecosystem water-use efficiency of european forests from eddy covariance measurements
journal, January 2008

  • Kuglitsch, F. G.; Reichstein, M.; Beer, C.
  • Biogeosciences Discussions, Vol. 5, Issue 6
  • DOI: 10.5194/bgd-5-4481-2008

How is water-use efficiency of terrestrial ecosystems distributed and changing on Earth?
journal, December 2014

  • Tang, Xuguang; Li, Hengpeng; Desai, Ankur R.
  • Scientific Reports, Vol. 4, Issue 1
  • DOI: 10.1038/srep07483

ABA-based chemical signalling: the co-ordination of responses to stress in plants
journal, February 2002


Temperature response of parameters of a biochemically based model of photosynthesis. II. A review of experimental data
journal, September 2002


On the Assessment of Surface Heat Flux and Evaporation Using Large-Scale Parameters
journal, February 1972


A roadmap for improving the representation of photosynthesis in Earth system models
journal, November 2016

  • Rogers, Alistair; Medlyn, Belinda E.; Dukes, Jeffrey S.
  • New Phytologist, Vol. 213, Issue 1
  • DOI: 10.1111/nph.14283

Do Woody Plants Operate Near the Point of Catastrophic Xylem Dysfunction Caused by Dynamic Water Stress?: Answers from a Model
journal, November 1988

  • Tyree, Melvin T.; Sperry, John S.
  • Plant Physiology, Vol. 88, Issue 3
  • DOI: 10.1104/pp.88.3.574

Energy balance closure at FLUXNET sites
journal, December 2002


Diurnal centroid of ecosystem energy and carbon fluxes at FLUXNET sites: DIURNAL ENERGY FLUXES AT FLUXNET SITES
journal, November 2003

  • Wilson, Kell B.; Baldocchi, Dennis; Falge, Eva
  • Journal of Geophysical Research: Atmospheres, Vol. 108, Issue D21
  • DOI: 10.1029/2001JD001349

miRNALoc: predicting miRNA subcellular localizations based on principal component scores of physico-chemical properties and pseudo compositions of di-nucleotides
journal, September 2020

  • Meher, Prabina Kumar; Satpathy, Subhrajit; Rao, Atmakuri Ramakrishna
  • Scientific Reports, Vol. 10, Issue 1
  • DOI: 10.1038/s41598-020-71381-4

Early-Morning Flow Transition in a Valley in Low-Mountain Terrain Under Clear-Sky Conditions
journal, April 2014

  • Brötz, Björn; Eigenmann, Rafael; Dörnbrack, Andreas
  • Boundary-Layer Meteorology, Vol. 152, Issue 1
  • DOI: 10.1007/s10546-014-9921-7

The effect of soil water content, soil temperature, soil pH-value and the root mass on soil CO2 efflux – A modified model
journal, January 2005


How do leaf and ecosystem measures of water-use efficiency compare?
journal, June 2017

  • Medlyn, Belinda E.; De Kauwe, Martin G.; Lin, Yan-Shih
  • New Phytologist, Vol. 216, Issue 3
  • DOI: 10.1111/nph.14626

Regression Quantiles
journal, January 1978

  • Koenker, Roger; Bassett, Gilbert
  • Econometrica, Vol. 46, Issue 1
  • DOI: 10.2307/1913643

Works referencing / citing this record:

An Algorithm Differentiating Sunlit and Shaded Leaves for Improving Canopy Conductance and Vapotranspiration Estimates
journal, April 2019

  • Li, Jing; Ju, Weimin; He, Wei
  • Journal of Geophysical Research: Biogeosciences, Vol. 124, Issue 4
  • DOI: 10.1029/2018jg004675

Coupling Water and Carbon Fluxes to Constrain Estimates of Transpiration: The TEA Algorithm
journal, December 2018

  • Nelson, Jacob A.; Carvalhais, Nuno; Cuntz, Matthias
  • Journal of Geophysical Research: Biogeosciences, Vol. 123, Issue 12
  • DOI: 10.1029/2018jg004727

Monitoring Tree Sway as an Indicator of Water Stress
journal, November 2019

  • Ciruzzi, Dominick M.; Loheide, Steven P.
  • Geophysical Research Letters, Vol. 46, Issue 21
  • DOI: 10.1029/2019gl084122

Carbon–water flux coupling under progressive drought
journal, January 2019


Using phase lags to evaluate model biases in simulating the diurnal cycle of evapotranspiration: a case study in Luxembourg
journal, January 2019

  • Renner, Maik; Brenner, Claire; Mallick, Kaniska
  • Hydrology and Earth System Sciences, Vol. 23, Issue 1
  • DOI: 10.5194/hess-23-515-2019