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Title: Qresp, a tool for curating, discovering and exploring reproducible scientific papers

Abstract

We propose a strategy and present a simple tool to facilitate scientific data reproducibility by making available, in a distributed manner, all data and procedures presented in scientific papers, together with metadata to render them searchable and discoverable. In particular, we describe a graphical user interface (GUI), Qresp, to curate papers (i.e. generate metadata) and to explore curated papers and automatically access the data presented in scientific publications.

Authors:
ORCiD logo [1]; ORCiD logo [2];  [2];  [2];  [2];  [2];  [1];  [1]
+ Show Author Affiliations
  1. Argonne National Lab. (ANL), Lemont, IL (United States); Univ. of Chicago, IL (United States)
  2. Univ. of Chicago, IL (United States)
Publication Date:
Research Org.:
Argonne National Lab. (ANL), Argonne, IL (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES) (SC-22). Materials Sciences & Engineering Division; Midwest Integrated Center for Computational Materials (MICCoM)
OSTI Identifier:
1493732
Grant/Contract Number:  
AC02-06CH11357
Resource Type:
Accepted Manuscript
Journal Name:
Scientific Data
Additional Journal Information:
Journal Volume: 6; Journal ID: ISSN 2052-4463
Publisher:
Nature Publishing Group
Country of Publication:
United States
Language:
English
Subject:
99 GENERAL AND MISCELLANEOUS; 96 KNOWLEDGE MANAGEMENT AND PRESERVATION

Citation Formats

Govoni, Marco, Munakami, Milson, Tanikanti, Aditya, Skone, Jonathan H., Runesha, Hakizumwami B., Giberti, Federico, de Pablo, Juan, and Galli, Giulia. Qresp, a tool for curating, discovering and exploring reproducible scientific papers. United States: N. p., 2019. Web. doi:10.1038/sdata.2019.2.
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Govoni, Marco, Munakami, Milson, Tanikanti, Aditya, Skone, Jonathan H., Runesha, Hakizumwami B., Giberti, Federico, de Pablo, Juan, & Galli, Giulia. Qresp, a tool for curating, discovering and exploring reproducible scientific papers. United States. https://doi.org/10.1038/sdata.2019.2
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Govoni, Marco, Munakami, Milson, Tanikanti, Aditya, Skone, Jonathan H., Runesha, Hakizumwami B., Giberti, Federico, de Pablo, Juan, and Galli, Giulia. Tue . "Qresp, a tool for curating, discovering and exploring reproducible scientific papers". United States. https://doi.org/10.1038/sdata.2019.2. https://www.osti.gov/servlets/purl/1493732.
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@article{osti_1493732,
title = {Qresp, a tool for curating, discovering and exploring reproducible scientific papers},
author = {Govoni, Marco and Munakami, Milson and Tanikanti, Aditya and Skone, Jonathan H. and Runesha, Hakizumwami B. and Giberti, Federico and de Pablo, Juan and Galli, Giulia},
abstractNote = {We propose a strategy and present a simple tool to facilitate scientific data reproducibility by making available, in a distributed manner, all data and procedures presented in scientific papers, together with metadata to render them searchable and discoverable. In particular, we describe a graphical user interface (GUI), Qresp, to curate papers (i.e. generate metadata) and to explore curated papers and automatically access the data presented in scientific publications.},
doi = {10.1038/sdata.2019.2},
journal = {Scientific Data},
number = ,
volume = 6,
place = {United States},
year = {2019},
month = {1}
}
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Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1038/sdata.2019.2
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Cited by: 1 work
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Figures / Tables:

Figure 1 Figure 1: Summary of Qresp capabilities. Organization of data used and generated in a scientific paper (Organizer: see also Fig. 2); curation of data (Curator: see also Fig. 2) and exploration of papers (Explorer; see also Figs 3 and 4).
All figures and tables (4 total)
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    Works referencing / citing this record:

    MatD^3^: A Database and Online Presentation Package for Research Data Supporting Materials Discovery, Design, and Dissemination
    journal, January 2020

    • Laasner, Raul; Du, Xiaochen; Tanikanti, Aditya
    • Journal of Open Source Software, Vol. 5, Issue 45
    • DOI: 10.21105/joss.01945
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