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Title: Draft Genome Sequences of Two Closely Related Marichromatium Isolates, Photosynthetic Gammaproteobacteria from Marine Ecosystems

Journal Article · · Microbiology Resource Announcements
 [1];  [1];  [1];  [1];
  1. Department of Biology, Washington University in St. Louis, St. Louis, Missouri, USA
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Marichromatium species are photosynthetic gammaproteobacteria found in marine environments. Only two Marichromatium genomes are publicly available.

Sponsoring Organization:
USDOE
Grant/Contract Number:
SC0014613
OSTI ID:
1490117
Journal Information:
Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 2 Vol. 8; ISSN 2576-098X
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (16)

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A new moderately thermophilic and high sulfide tolerant biotype of Marichromatium gracile, isolated from tidal sediments of the German Wadden Sea: Marichromatium gracile biotype thermosulfidiphilum journal February 2009
Marichromatium litoris sp. nov. and Marichromatium chrysaorae sp. nov. isolated from beach sand and from a jelly fish (Chrysaora colorata) journal December 2011
RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes journal February 2015
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing journal May 2012
Trimmomatic: a flexible trimmer for Illumina sequence data journal April 2014
MUSCLE: multiple sequence alignment with high accuracy and high throughput journal March 2004
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST) journal November 2013
NCBI prokaryotic genome annotation pipeline journal June 2016
Rhodovulum iodosum sp. nov. and Rhodovulum robiginosum sp. nov., two new marine phototrophic ferrous-iron-oxidizing purple bacteria journal April 1999
Marichromatium fluminis sp. nov., a slightly alkaliphilic, phototrophic gammaproteobacterium isolated from river sediment journal August 2009
Marichromatium indicum sp. nov., a novel purple sulfur gammaproteobacterium from mangrove soil of Goa, India journal March 2005
Marichromatium bheemlicum sp. nov., a non-diazotrophic, photosynthetic gammaproteobacterium from a marine aquaculture pond journal June 2007
Critical Evaluation of Two Primers Commonly Used for Amplification of Bacterial 16S rRNA Genes journal February 2008
Genome Sequence of Marichromatium gracile YL-28, a Purple Sulfur Bacterium with Bioremediation Potential journal May 2016
The RAST Server: Rapid Annotations using Subsystems Technology journal January 2008

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