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Title: Synthetic ozone deposition and stomatal uptake at flux tower sites

Abstract

Abstract. We develop and evaluate a method to estimate O3 deposition and stomatal O3 uptake across networks of eddy covariance flux tower sites where O3 concentrations and O3 fluxes have not been measured. The method combines standard micrometeorological flux measurements, which constrain O3 deposition velocity and stomatal conductance, with a gridded dataset of observed surface O3 concentrations. Measurement errors are propagated through all calculations to quantify O3 flux uncertainties. We evaluate the method at three sites with O3 flux measurements: Harvard Forest, Blodgett Forest, and Hyytiälä Forest. The method reproduces 83% or more of the variability in daily stomatal uptake at these sites with modest mean bias (21% or less). At least 95% of daily average values agree with measurements within a factor of 2 and, according to the error analysis, the residual differences from measured O3 fluxes are consistent with the uncertainty in the underlying measurements.The product, called synthetic O3 flux or SynFlux, includes 43 FLUXNET sites in the United States and 60 sites in Europe, totaling 926 site years of data. This dataset, which is now public, dramatically expands the number and types of sites where O3 fluxes can be used for ecosystem impact studies and evaluation of airmore » quality and climate models. Across these sites, the mean stomatal conductance and O3 deposition velocity is 0.03–1.0cms-1. The stomatal O3 flux during the growing season (typically April–September) is 0.5–11.0nmol O3m-2s-1 with a mean of 4.5nmol O3m-2s-1 and the largest fluxes generally occur where stomatal conductance is high, rather than where O3 concentrations are high. The conductance differences across sites can be explained by atmospheric humidity, soil moisture, vegetation type, irrigation, and land management. These stomatal fluxes suggest that ambient O3 degrades biomass production and CO2 sequestration by 20%–24% at crop sites, 6%–29% at deciduous broadleaf forests, and 4%–20% at evergreen needleleaf forests in the United States and Europe.« less

Authors:
 [1]; ORCiD logo [1];  [2]; ORCiD logo [3]; ORCiD logo [4];  [5]; ORCiD logo [6];  [7]
  1. Florida State Univ., Tallahassee, FL (United States)
  2. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Univ. of California, Berkeley, CA (United States)
  3. Council of Agricultural Research and Economics (CREA), Arezzo (Italy)
  4. Univ. of California, Berkeley, CA (United States)
  5. Univ. of Helsinki (Finland)
  6. Northwestern Univ., Evanston, IL (United States)
  7. National Oceanic and Atmospheric Administration (NOAA), Princeton, NJ (United States). Geophysical Fluid Dynamics Lab.
Publication Date:
Research Org.:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC)
OSTI Identifier:
1478352
Grant/Contract Number:  
AC02-05CH11231
Resource Type:
Accepted Manuscript
Journal Name:
Biogeosciences (Online)
Additional Journal Information:
Journal Name: Biogeosciences (Online); Journal Volume: 15; Journal Issue: 17; Journal ID: ISSN 1726-4189
Publisher:
European Geosciences Union
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Ducker, Jason A., Holmes, Christopher D., Keenan, Trevor F., Fares, Silvano, Goldstein, Allen H., Mammarella, Ivan, Munger, J. William, and Schnell, Jordan. Synthetic ozone deposition and stomatal uptake at flux tower sites. United States: N. p., 2018. Web. doi:10.5194/bg-15-5395-2018.
Ducker, Jason A., Holmes, Christopher D., Keenan, Trevor F., Fares, Silvano, Goldstein, Allen H., Mammarella, Ivan, Munger, J. William, & Schnell, Jordan. Synthetic ozone deposition and stomatal uptake at flux tower sites. United States. https://doi.org/10.5194/bg-15-5395-2018
Ducker, Jason A., Holmes, Christopher D., Keenan, Trevor F., Fares, Silvano, Goldstein, Allen H., Mammarella, Ivan, Munger, J. William, and Schnell, Jordan. Thu . "Synthetic ozone deposition and stomatal uptake at flux tower sites". United States. https://doi.org/10.5194/bg-15-5395-2018. https://www.osti.gov/servlets/purl/1478352.
@article{osti_1478352,
title = {Synthetic ozone deposition and stomatal uptake at flux tower sites},
author = {Ducker, Jason A. and Holmes, Christopher D. and Keenan, Trevor F. and Fares, Silvano and Goldstein, Allen H. and Mammarella, Ivan and Munger, J. William and Schnell, Jordan},
abstractNote = {Abstract. We develop and evaluate a method to estimate O3 deposition and stomatal O3 uptake across networks of eddy covariance flux tower sites where O3 concentrations and O3 fluxes have not been measured. The method combines standard micrometeorological flux measurements, which constrain O3 deposition velocity and stomatal conductance, with a gridded dataset of observed surface O3 concentrations. Measurement errors are propagated through all calculations to quantify O3 flux uncertainties. We evaluate the method at three sites with O3 flux measurements: Harvard Forest, Blodgett Forest, and Hyytiälä Forest. The method reproduces 83% or more of the variability in daily stomatal uptake at these sites with modest mean bias (21% or less). At least 95% of daily average values agree with measurements within a factor of 2 and, according to the error analysis, the residual differences from measured O3 fluxes are consistent with the uncertainty in the underlying measurements.The product, called synthetic O3 flux or SynFlux, includes 43 FLUXNET sites in the United States and 60 sites in Europe, totaling 926 site years of data. This dataset, which is now public, dramatically expands the number and types of sites where O3 fluxes can be used for ecosystem impact studies and evaluation of air quality and climate models. Across these sites, the mean stomatal conductance and O3 deposition velocity is 0.03–1.0cms-1. The stomatal O3 flux during the growing season (typically April–September) is 0.5–11.0nmol O3m-2s-1 with a mean of 4.5nmol O3m-2s-1 and the largest fluxes generally occur where stomatal conductance is high, rather than where O3 concentrations are high. The conductance differences across sites can be explained by atmospheric humidity, soil moisture, vegetation type, irrigation, and land management. These stomatal fluxes suggest that ambient O3 degrades biomass production and CO2 sequestration by 20%–24% at crop sites, 6%–29% at deciduous broadleaf forests, and 4%–20% at evergreen needleleaf forests in the United States and Europe.},
doi = {10.5194/bg-15-5395-2018},
journal = {Biogeosciences (Online)},
number = 17,
volume = 15,
place = {United States},
year = {Thu Sep 06 00:00:00 EDT 2018},
month = {Thu Sep 06 00:00:00 EDT 2018}
}

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  • Reverter, B. R.; Sánchez-Cañete, E. P.; Resco, V.
  • Biogeosciences, Vol. 7, Issue 9
  • DOI: 10.5194/bg-7-2601-2010

The global impact of ozone on agricultural crop yields under current and future air quality legislation
journal, January 2009


Advances in understanding ozone impact on forest trees: Messages from novel phytotron and free-air fumigation studies
journal, June 2010


Factors controlling CO 2 exchange on timescales from hourly to decadal at Harvard Forest
journal, January 2007

  • Urbanski, S.; Barford, C.; Wofsy, S.
  • Journal of Geophysical Research, Vol. 112, Issue G2
  • DOI: 10.1029/2006JG000293

A strategy for quality and uncertainty assessment of long-term eddy-covariance measurements
journal, February 2013


Ozone vegetation damage effects on gross primary productivity in the United States
journal, January 2014


Eddy correlation measurements of CO2, latent heat, and sensible heat fluxes over a crop surface
journal, July 1984

  • Anderson, Dean E.; Verma, Shashi B.; Rosenberg, Norman J.
  • Boundary-Layer Meteorology, Vol. 29, Issue 3
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Modelling carbon budget of Mediterranean forests using ground and remote sensing measurements
journal, December 2005


Diel ecosystem conductance response to vapor pressure deficit is suboptimal and independent of soil moisture
journal, March 2018


Gaseous Diffusion Coefficients
journal, January 1972

  • Marrero, T. R.; Mason, E. A.
  • Journal of Physical and Chemical Reference Data, Vol. 1, Issue 1
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Evaporation and surface temperature
journal, January 1981

  • Monteith, Jl
  • Quarterly Journal of the Royal Meteorological Society, Vol. 107, Issue 451
  • DOI: 10.1256/smsqj.45101

Wood phenology, not carbon input, controls the interannual variability of wood growth in a temperate oak forest
journal, November 2015

  • Delpierre, Nicolas; Berveiller, Daniel; Granda, Elena
  • New Phytologist, Vol. 210, Issue 2
  • DOI: 10.1111/nph.13771

Validation of coarse spatial resolution LAI and FAPAR time series over cropland in southwest France
journal, December 2013


Biophysical controls on interannual variability in ecosystem-scale CO 2 and CH 4 exchange in a California rice paddy : INTERANNUAL VARIABILITY RICE CH
journal, March 2016

  • Knox, Sara Helen; Matthes, Jaclyn Hatala; Sturtevant, Cove
  • Journal of Geophysical Research: Biogeosciences, Vol. 121, Issue 3
  • DOI: 10.1002/2015JG003247

Investigating Dry Deposition of Ozone to Vegetation: Investigating Dry Deposition of Ozone to Vegetation
journal, January 2018

  • Silva, Sam J.; Heald, Colette L.
  • Journal of Geophysical Research: Atmospheres, Vol. 123, Issue 1
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Seasonal and inter-annual variability of the net ecosystem CO 2 exchange of a temperate mountain grassland: Effects of weather and management
journal, January 2008

  • Wohlfahrt, Georg; Hammerle, Albin; Haslwanter, Alois
  • Journal of Geophysical Research, Vol. 113, Issue D8
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Carbon, water, and energy fluxes in a semiarid cold desert grassland during and following multiyear drought
journal, January 2010

  • Bowling, D. R.; Bethers-Marchetti, S.; Lunch, C. K.
  • Journal of Geophysical Research, Vol. 115, Issue G4
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Large carbon uptake by an unmanaged 250-year-old deciduous forest in Central Germany
journal, September 2003

  • Knohl, Alexander; Schulze, Ernst-Detlef; Kolle, Olaf
  • Agricultural and Forest Meteorology, Vol. 118, Issue 3-4
  • DOI: 10.1016/S0168-1923(03)00115-1

Parametrization of two photosynthesis models at the canopy scale in a northern boreal Scots pine forest
journal, January 2007


Soil respiration in a Mediterranean oak forest at different developmental stages after coppicing
journal, January 2006


Data Structures for Statistical Computing in Python
conference, January 2010


Statsmodels: Econometric and Statistical Modeling with Python
conference, January 2010


Forest-atmosphere exchange of ozone: sensitivity to very reactive biogenic VOC emissions and implications for in-canopy photochemistry
journal, January 2011

  • Wolfe, G. M.; Thornton, J. A.; McKay, M.
  • Atmospheric Chemistry and Physics Discussions, Vol. 11, Issue 5
  • DOI: 10.5194/acpd-11-13381-2011

Fundamentals of Atmospheric Modeling
journal, January 2000


Can a bog drained for forestry be a stronger carbon sink than a natural bog forest?
text, January 2014


Synflux: A Sythetic Dataset Of Atmospheric Deposition And Stomatal Uptake At Flux Tower Sites
dataset, January 2018


Reconciling the optimal and empirical approaches to modelling stomatal conductance
journal, October 2012


Pre-industrial to end 21st century projections of tropospheric ozone from the Atmospheric Chemistry and Climate Model Intercomparison Project (ACCMIP)
journal, January 2012

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  • Atmospheric Chemistry and Physics Discussions, Vol. 12, Issue 8
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A new mass conservation approach to the study of CO2 advection in an alpine forest
text, January 2009


AmeriFlux US-Tw4 Twitchell East End Wetland
dataset, January 2013


Comparison of Different Algorithms for Stomatal Ozone Flux Determination from Micrometeorological Measurements
journal, November 2006

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  • Water, Air, and Soil Pollution, Vol. 179, Issue 1-4
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Modelling carbon budget of Mediterranean forests using ground and remote sensing measurements
journal, December 2005


Increasing net CO2 uptake by a Danish beech forest during the period from 1996 to 2009
journal, July 2011


New critical levels for ozone effects on young trees based on AOT40 and simulated cumulative leaf uptake of ozone
journal, May 2004


Environmental controls on ozone fluxes in a poplar plantation in Western Europe
journal, January 2014


Estimating heterotrophic and autotrophic soil respiration in a semi-natural forest of Lombardy, Italy
journal, November 2012


The carbon uptake of a mid latitude pine forest growing on sandy soil
journal, May 2002


Effects of climate variability on the carbon dioxide, water, and sensible heat fluxes above a ponderosa pine plantation in the Sierra Nevada (CA)
journal, March 2000

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  • Agricultural and Forest Meteorology, Vol. 101, Issue 2-3
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Effect of chronic ozone fumigation on the photosynthetic process of poplar clones showing different sensitivity
journal, August 2001


Canopy Architecture and Turbulence Structure in a Coniferous Forest
journal, July 2003

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  • Boundary-Layer Meteorology, Vol. 108, Issue 1
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Why are there large differences between models in global budgets of tropospheric ozone?
journal, January 2007

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  • Journal of Geophysical Research, Vol. 112, Issue D5
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A New Data Set to Keep a Sharper Eye on Land-Air Exchanges
journal, April 2017


Evaluation and Intercomparison of Five North American Dry Deposition Algorithms at a Mixed Forest Site
journal, July 2018

  • Wu, Zhiyong; Schwede, Donna B.; Vet, Robert
  • Journal of Advances in Modeling Earth Systems, Vol. 10, Issue 7
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Atmospheric deposition of reactive nitrogen oxides and ozone in a temperate deciduous forest and a subarctic woodland: 1. Measurements and mechanisms
journal, May 1996

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  • Journal of Geophysical Research: Atmospheres, Vol. 101, Issue D7
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Indirect radiative forcing of climate change through ozone effects on the land-carbon sink
journal, July 2007


Phenology and carbon dioxide source/sink strength of a subalpine grassland in response to an exceptionally short snow season
journal, April 2013


Smaller, faster stomata: scaling of stomatal size, rate of response, and stomatal conductance
journal, January 2013

  • Drake, Paul L.; Froend, Ray H.; Franks, Peter J.
  • Journal of Experimental Botany, Vol. 64, Issue 2
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Towards physiologically meaningful water‐use efficiency estimates from eddy covariance data
journal, September 2017

  • Knauer, Jürgen; Zaehle, Sönke; Medlyn, Belinda E.
  • Global Change Biology, Vol. 24, Issue 2
  • DOI: 10.1111/gcb.13893

A decade of carbon, water and energy flux measurements of an old spruce forest at the Anchor Station Tharandt
journal, January 2007


Wood phenology, not carbon input, controls the interannual variability of wood growth in a temperate oak forest
journal, November 2015

  • Delpierre, Nicolas; Berveiller, Daniel; Granda, Elena
  • New Phytologist, Vol. 210, Issue 2
  • DOI: 10.1111/nph.13771

Ambient Levels of Ozone Reduce Net Photosynthesis in Tree and Crop Species
journal, November 1985


The Effects of Tropospheric Ozone on Net Primary Productivity and Implications for Climate Change
journal, June 2012


Spatiotemporal Variations in Growing Season Exchanges of CO 2 , H 2 O, and Sensible Heat in Agricultural Fields of the Southern Great Plains
journal, October 2007

  • Fischer, Marc L.; Billesbach, David P.; Berry, Joseph A.
  • Earth Interactions, Vol. 11, Issue 17
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Assessment of MERRA-2 Land Surface Hydrology Estimates
journal, April 2017


Stomatal and Non-Stomatal Turbulent Deposition Flux of Ozone to a Managed Peatland
journal, September 2017

  • El-Madany, Tarek; Niklasch, Katharina; Klemm, Otto
  • Atmosphere, Vol. 8, Issue 12
  • DOI: 10.3390/atmos8090175

Temporal and spatial variations of CO2, CH4 and N2O fluxes at three differently managed grasslands
text, January 2013


Forest-atmosphere exchange of ozone: sensitivity to very reactive biogenic VOC emissions and implications for in-canopy photochemistry
journal, January 2011

  • Wolfe, G. M.; Thornton, J. A.; McKay, M.
  • Atmospheric Chemistry and Physics, Vol. 11, Issue 15
  • DOI: 10.5194/acp-11-7875-2011

Ozone deposition into a boreal forest over a decade of observations: evaluating deposition partitioning and driving variables
journal, January 2012

  • Rannik, Ü.; Altimir, N.; Mammarella, I.
  • Atmospheric Chemistry and Physics, Vol. 12, Issue 24
  • DOI: 10.5194/acp-12-12165-2012

Foliage surface ozone deposition: a role for surface moisture?
journal, January 2006


Contrasting carbon dioxide fluxes between a drying shrub wetland in Northern Wisconsin, USA, and nearby forests
journal, January 2009


Analyzing the major drivers of NEE in a Mediterranean alpine shrubland
journal, January 2010

  • Reverter, B. R.; Sánchez-Cañete, E. P.; Resco, V.
  • Biogeosciences, Vol. 7, Issue 9
  • DOI: 10.5194/bg-7-2601-2010

Filling the gaps in meteorological continuous data measured at FLUXNET sites with ERA-Interim reanalysis
journal, January 2015


Synflux: A Sythetic Dataset Of Atmospheric Deposition And Stomatal Uptake At Flux Tower Sites
dataset, January 2018


Works referencing / citing this record:

Importance of dry deposition parameterization choice in global simulations of surface ozone
journal, January 2019

  • Wong, Anthony Y. H.; Geddes, Jeffrey A.; Tai, Amos P. K.
  • Atmospheric Chemistry and Physics, Vol. 19, Issue 22
  • DOI: 10.5194/acp-19-14365-2019