Title: Metagenomic evaluation of a Utah tar sand microbiota suggests the predominant hydrocarbonoclastic role of Actinobacteria

Journal Article · · F1000Research

Background: Occurrences of tar sands have been reported in 22 states in the United States; however, the largest deposit is located in southwestern Utah. It has been suggested that tar sands were created by the microbial degradation of immobile subsurface oil over several million years; however, little is known about the indigenous microbial communities in the bituminous tar sands. Methods: This study identified Utah tar sand microbiota using next-generation sequencing technology and characterized the functional diversity using community-level physiological profile (CLPP). Results: Microbiota identified in these tar sands are mainly affiliated with the Gram-positive Actinobacteria and representatives of genera that have also been previously shown to degrade aromatic hydrocarbons, including Arthrobacter , Dietzia , Janibacter , Nocardioides , Microbacterium , Agrococcus and Salinibacterium , suggesting that these microbes likely play roles in the biodegradation of oil-hydrocarbons. CLPP analysis revealed less than 24 h was needed for the first color development in the microplate wells containing the polymers, whereas the duration of the lag phase of the carboxylic acids was prolonged. Conclusions: The quick utilization of the polymers suggests that the indigenous microbial community, especially the actinomycetes in the tar sand habitat, are poised and primed to degrade these recalcitrant compounds.

Sponsoring Organization:
USDOE
OSTI ID:
1477900
Journal Information:
F1000Research, Journal Name: F1000Research Vol. 7; ISSN 2046-1402
Publisher:
F1000 Research, Ltd.Copyright Statement
Country of Publication:
United Kingdom
Language:
English

References (14)

Microbial Evolution, Diversity, and Ecology: A Decade of Ribosomal RNA Analysis of Uncultivated Microorganisms journal January 1998
Microbial processes in the Athabasca Oil Sands and their potential applications in microbial enhanced oil recovery journal August 2011
Functional diversity of microbial communities: A quantitative approach journal September 1994
Substrate utilization pattern, biomass and activity of microbial communities in a sequence of heavy metal-polluted paddy soils journal July 2003
Using the Gini coefficient with BIOLOG substrate utilisation data to provide an alternative quantitative measure for comparing bacterial soil communities journal July 1997
Effects of vegetation type on soil microbial community structure and catabolic diversity assessed by polyphasic methods in North China journal January 2007
Harnessing oil sands microbial communities for use in ex situ naphthenic acid bioremediation journal February 2014
Data transformations in the analysis of community-level substrate utilization data from microplates journal June 2007
One-dimensional metric for tracking bacterial community divergence using sole carbon source utilization patterns journal October 2009
Sleuthing out bacterial identities journal May 1989
Microbial Diversity in Natural Asphalts of the Rancho La Brea Tar Pits journal April 2007
Draft Genome Sequence of Rhodococcus opacus Strain M213 Shows a Diverse Catabolic Potential journal January 2013
Characterization of the bacterial community structure of Sydney Tar Ponds sediment journal June 2011
A Consumer's Guide to Evenness Indices journal May 1996