Bacterial–fungal interactions: ecology, mechanisms and challenges

Deveau, Aurélie; Bonito, Gregory; Uehling, Jessie; Paoletti, Mathieu; Becker, Matthias; Bindschedler, Saskia; Hacquard, Stéphane; Hervé, Vincent; Labbé, Jessy; Lastovetsky, Olga A.; Mieszkin, Sophie; Millet, Larry J.; Vajna, Balázs; Junier, Pilar; Bonfante, Paola; Krom, Bastiaan P.; Olsson, Stefan; van Elsas, Jan Dirk; Wick, Lukas Y.

doi:10.1093/femsre/fuy008

Title: Bacterial–fungal interactions: ecology, mechanisms and challenges

Journal Article · 19 February 2018 · FEMS Microbiology Reviews

DOI: https://doi.org/10.1093/femsre/fuy008 · OSTI ID:1468277

Deveau, Aurélie ^[1]; Bonito, Gregory ^[2]; Uehling, Jessie ^[3]; Paoletti, Mathieu ^[4]; Becker, Matthias ^[5]; Bindschedler, Saskia ^[6]; Hacquard, Stéphane ^[7];

^[8];

^[9]; Lastovetsky, Olga A. ^[10]; Mieszkin, Sophie ^[1];

^[11]; Vajna, Balázs ^[12]; Junier, Pilar ^[6]; Bonfante, Paola ^[13]; Krom, Bastiaan P. ^[14]; Olsson, Stefan ^[15]; van Elsas, Jan Dirk ^[16]; Wick, Lukas Y. ^[17]

Univ. de Lorraine, Champenoux (France)
Michigan State Univ., East Lansing, MI (United States)
Duke Univ., Durham, NC (United States); Univ. of California, Berkeley, CA (United States)
Institut de Biologie et Genetique Cellulaire, Bordeaux cedex (France)
Leibniz-Institute of Vegetable and Ornamental Crops, GroBbeeren (Germany)
Univ. of Neuchatel, Neuchatel (Switzerland)
Max Planck Institute for Plant Breeding Research, Cologne (Germany)
Univ. of Neuchatel, Neuchatel (Switzerland); Univ. of Lausanne, Lausanne (Switzerland)
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Univ. of Tennessee, Knoxville, TN (United States)
Cornell Univ., Ithaca, NY (United States)
Univ. of Tennessee, Knoxville, TN (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Eotvos Lorand Univ., Budapest (Hungary)
Univ. of Torino, Torino (Italy)
Academic Centre for Dentistry, Amsterdam (The Netherlands)
Fujian Agriculture and Forestry Univ. (FAFU), Fuzhou (China)
Univ. of Groningen, Groningen (The Netherlands)
Helmholtz Centre for Environmental Research—UFZ, Leipzig (Germany)

Fungi and bacteria are found living together in a wide variety of environments. Their interactions are significant drivers of many ecosystem functions and are important for the health of plants and animals. A large number of fungal and bacterial families engage in complex interactions that lead to critical behavioural shifts of the microorganisms ranging from mutualism to antagonism. The importance of bacterial–fungal interactions (BFI) in environmental science, medicine and biotechnology has led to the emergence of a dynamic and multidisciplinary research field that combines highly diverse approaches including molecular biology, genomics, geochemistry, chemical and microbial ecology, biophysics and ecological modelling. In this review, we discuss recent advances that underscore the roles of BFI across relevant habitats and ecosystems. A particular focus is placed on the understanding of BFI within complex microbial communities and in regard of the metaorganism concept. We also discuss recent discoveries that clarify the (molecular) mechanisms involved in bacterial–fungal relationships, and the contribution of new technologies to decipher generic principles of BFI in terms of physical associations and molecular dialogues. Finally, we discuss future directions for research in order to stimulate synergy within the BFI research area and to resolve outstanding questions.

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Research Organization:: Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER)

Grant/Contract Number:: AC05-00OR22725

OSTI ID:: 1468277

Alternate ID(s):: OSTI ID: 1471883

Journal Information:: FEMS Microbiology Reviews, Vol. 42, Issue 3; ISSN 1574-6976

Publisher:: Federation of European Microbiological SocietiesCopyright Statement

Country of Publication:: United States

Language:: English

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