[19] Integrated methods for the construction of three-dimensional models and computational probing of structure-function relations in G protein-coupled receptors
|
book
|
January 1995 |
The 2.1 Å Resolution Structure of Cyanopindolol-Bound β1-Adrenoceptor Identifies an Intramembrane Na+ Ion that Stabilises the Ligand-Free Receptor
|
journal
|
March 2014 |
High-resolution crystal structure of human protease-activated receptor 1
|
journal
|
December 2012 |
Agonist-bound adenosine A2A receptor structures reveal common features of GPCR activation
|
journal
|
May 2011 |
Improved prediction of protein side-chain conformations with SCWRL4
|
journal
|
December 2009 |
Counting out to the flexibility of molecules
|
journal
|
November 2005 |
The Role of Ligands on the Equilibria Between Functional States of a G Protein-Coupled Receptor
|
journal
|
June 2013 |
Molecular Dynamics Simulations of Phosphatidylcholine Membranes: A Comparative Force Field Study
|
journal
|
September 2012 |
Endogenous Allosteric Modulators of G Protein–Coupled Receptors
|
journal
|
February 2015 |
Modulation of GPCRs by monovalent cations and anions
|
journal
|
November 2014 |
Allosteric Modulation of Family C G-Protein-Coupled Receptors: from Molecular Insights to Therapeutic Perspectives
|
journal
|
January 2011 |
The role of dimer asymmetry and protomer dynamics in enzyme catalysis
|
journal
|
January 2017 |
P-LINCS: A Parallel Linear Constraint Solver for Molecular Simulation
|
journal
|
December 2007 |
Intracellular Transfer of Na+ in an Active-State G-Protein-Coupled Receptor
|
journal
|
January 2018 |
Comparison of simple potential functions for simulating liquid water
|
journal
|
July 1983 |
A Leap-frog Algorithm for Stochastic Dynamics
|
journal
|
March 1988 |
An Algorithm for Two-Dimensional Rigidity Percolation: The Pebble Game
|
journal
|
November 1997 |
Structural Insights into the Dynamic Process of β 2 -Adrenergic Receptor Signaling
|
journal
|
May 2015 |
Structural Basis for Allosteric Regulation of GPCRs by Sodium Ions
|
journal
|
July 2012 |
GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit
|
journal
|
February 2013 |
All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins †
|
journal
|
April 1998 |
Differential Effects of Mg 2+ and Other Divalent Cations on the Binding of Tritiated Opioid Ligands
|
journal
|
August 1992 |
Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types
|
journal
|
June 2010 |
Biased Signaling Pathways in 2-Adrenergic Receptor Characterized by 19F-NMR
|
journal
|
January 2012 |
LAMBADA and InflateGRO2: Efficient Membrane Alignment and Insertion of Membrane Proteins for Molecular Dynamics Simulations
|
journal
|
September 2012 |
Differential allosteric modulation by amiloride analogues of agonist and antagonist binding at A1 and A3 adenosine receptors
|
journal
|
February 2003 |
CHARMM-GUI Membrane Builder for Mixed Bilayers and Its Application to Yeast Membranes
|
journal
|
July 2009 |
Effects of mono- and divalent ions on the binding of the adenosine analogue CGS 21680 to adenosine A2 receptors in rat striatum
|
journal
|
December 1992 |
Regulation of agonist binding to A2A adenosine receptors: Effects of guanine nucleotides (GDP[S] and GTP[S]) and Mg2+ ion
|
journal
|
December 1993 |
Eukaryotic G protein-coupled receptors as descendants of prokaryotic sodium-translocating rhodopsins
|
journal
|
October 2015 |
Activation and allosteric modulation of a muscarinic acetylcholine receptor
|
journal
|
November 2013 |
Isostatic Block and Hole Frameworks
|
journal
|
January 2013 |
CHARMM-GUI: A web-based graphical user interface for CHARMM
|
journal
|
March 2008 |
Allosteric sodium in class A GPCR signaling
|
journal
|
May 2014 |
Extending the treatment of backbone energetics in protein force fields: Limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations
|
journal
|
August 2004 |
Particle mesh Ewald: An N ⋅log( N ) method for Ewald sums in large systems
|
journal
|
June 1993 |
Molecular dynamics with coupling to an external bath
|
journal
|
October 1984 |
Activation of the A2A adenosine G-protein-coupled receptor by conformational selection
|
journal
|
May 2016 |
Evaluating conformational free energies: The colony energy and its application to the problem of loop prediction
|
journal
|
May 2002 |
Allosteric Modulators of the Class A G Protein Coupled Receptors
|
book
|
January 2016 |
A comparison of chemical shift sensitivity of trifluoromethyl tags: optimizing resolution in 19F NMR studies of proteins
|
journal
|
March 2015 |
Structure of an Agonist-Bound Human A2A Adenosine Receptor
|
journal
|
March 2011 |
Algorithms for three-dimensional rigidity analysis and a first-order percolation transition
|
journal
|
October 2007 |
A Gα s Carboxyl-Terminal Peptide Prevents G s Activation by the A 2A Adenosine Receptor
|
journal
|
July 2000 |
Molecular control of δ-opioid receptor signalling
|
journal
|
January 2014 |
Kinetics of opiate receptor inactivation by sulfhydryl reagents: evidence for conformational change in presence of sodium ions.
|
journal
|
June 1975 |
Protein flexibility predictions using graph theory
|
journal
|
January 2001 |
A smooth particle mesh Ewald method
|
journal
|
November 1995 |
Structure of the adenosine A2A receptor bound to an engineered G protein
|
journal
|
July 2016 |
Loop modeling: Sampling, filtering, and scoring
|
journal
|
January 2008 |
Implementation of the CHARMM Force Field in GROMACS: Analysis of Protein Stability Effects from Correction Maps, Virtual Interaction Sites, and Water Models
|
journal
|
January 2010 |
VMD: Visual molecular dynamics
|
journal
|
February 1996 |
Allosteric Modulators of the Class A G Protein Coupled Receptors
|
book
|
January 2015 |
Improving the specificity of organophosphorus hydrolase to acephate by mutagenesis at its binding site: a computational study
|
journal
|
May 2021 |
Human aminolevulinate synthase structure reveals a eukaryotic-specific autoinhibitory loop regulating substrate binding and product release
|
journal
|
June 2020 |
Mechanism of pore opening in the calcium-activated chloride channel TMEM16A
|
journal
|
February 2021 |
Molecular control of δ-opioid receptor signalling
|
text
|
January 2014 |
Biased Signaling Pathways in β2-Adrenergic Receptor Characterized by 19F-NMR
|
book
|
August 2021 |
Allosteric sodium in class A GPCR signaling
|
text
|
January 2014 |
Structural Insights into the Dynamic Process of β2-Adrenergic Receptor Signaling
|
journal
|
September 2015 |
Extending the treatment of backbone energetics in protein force fields: Limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations
|
journal
|
August 2004 |
CHARMM-GUI: A web-based graphical user interface for CHARMM
|
journal
|
March 2008 |
AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
|
journal
|
January 2009 |
Protein flexibility predictions using graph theory
|
journal
|
January 2001 |
Loop modeling: Sampling, filtering, and scoring
|
journal
|
January 2008 |
Improved prediction of protein side-chain conformations with SCWRL4
|
journal
|
December 2009 |
An Algorithm for Two-Dimensional Rigidity Percolation: The Pebble Game
|
journal
|
November 1997 |
Interaction of Mg2+ with the allosteric site of muscarinic M2 receptors
|
journal
|
April 1998 |
Modulation of GPCRs by monovalent cations and anions
|
journal
|
November 2014 |
CHARMM-GUI Membrane Builder for Mixed Bilayers and Its Application to Yeast Membranes
|
journal
|
July 2009 |
Structural Insights into the Dynamic Process of β 2 -Adrenergic Receptor Signaling
|
journal
|
May 2015 |
Allosteric modulation of A2A adenosine receptors by amiloride analogues and sodium ions
|
journal
|
September 2000 |
LAMBADA and InflateGRO2: Efficient Membrane Alignment and Insertion of Membrane Proteins for Molecular Dynamics Simulations
|
journal
|
September 2012 |
P-LINCS: A Parallel Linear Constraint Solver for Molecular Simulation
|
journal
|
December 2007 |
The Role of Ligands on the Equilibria Between Functional States of a G Protein-Coupled Receptor
|
journal
|
June 2013 |
Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types
|
journal
|
June 2010 |
All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins †
|
journal
|
April 1998 |
Agonist-bound adenosine A2A receptor structures reveal common features of GPCR activation
|
journal
|
May 2011 |
High-resolution crystal structure of human protease-activated receptor 1
|
journal
|
December 2012 |
Activation and allosteric modulation of a muscarinic acetylcholine receptor
|
journal
|
November 2013 |
Activation of the A2A adenosine G-protein-coupled receptor by conformational selection
|
journal
|
May 2016 |
Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62
|
journal
|
January 2021 |
Comparison of simple potential functions for simulating liquid water
|
journal
|
July 1983 |
Molecular dynamics with coupling to an external bath
|
journal
|
October 1984 |
Evaluating conformational free energies: The colony energy and its application to the problem of loop prediction
|
journal
|
May 2002 |
Identification of a Novel Extracellular Cation-sensing G-protein-coupled Receptor
|
journal
|
September 2005 |
Delineating a Ca 2+ Binding Pocket within the Venus Flytrap Module of the Human Calcium-sensing Receptor
|
journal
|
September 2005 |
Novel Allosteric Modulators of G Protein-coupled Receptors
|
journal
|
June 2015 |
A Leap-frog Algorithm for Stochastic Dynamics
|
journal
|
March 1988 |
Differential Effects of Mg 2+ and Other Divalent Cations on the Binding of Tritiated Opioid Ligands
|
journal
|
August 1992 |
Endogenous Allosteric Modulators of G Protein–Coupled Receptors
|
journal
|
February 2015 |
Allosteric Modulation of Family C G-Protein-Coupled Receptors: from Molecular Insights to Therapeutic Perspectives
|
journal
|
January 2011 |
Structure of an Agonist-Bound Human A2A Adenosine Receptor
|
journal
|
March 2011 |
Biased Signaling Pathways in 2-Adrenergic Receptor Characterized by 19F-NMR
|
journal
|
January 2012 |
Structural Basis for Allosteric Regulation of GPCRs by Sodium Ions
|
journal
|
July 2012 |
Isostatic Block and Hole Frameworks
|
journal
|
January 2013 |
The 2.1 Å Resolution Structure of Cyanopindolol-Bound β1-Adrenoceptor Identifies an Intramembrane Na+ Ion that Stabilises the Ligand-Free Receptor
|
journal
|
March 2014 |