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Title: Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare reveal amino acids important for substrate recognition

Authors:
 [1] ;  [2] ;  [1] ;  [3] ;  [4] ;  [4] ;  [5] ;  [6] ;  [1]
  1. Department of Molecular Sciences, Swedish University of Agricultural Sciences, Uppsala Sweden
  2. Department of Chemical and Materials Engineering, University of Kentucky, Lexington KY USA
  3. Department of Chemistry, Biotechnology, and Food Science, Norwegian University of Life Sciences, Ås Norway
  4. Biosciences Center, National Renewable Energy Laboratory, Golden CO USA
  5. Department of Molecular Sciences, Swedish University of Agricultural Sciences, Uppsala Sweden, Department of Chemical Engineering, University of Patras, Greece
  6. Department of Chemical and Materials Engineering, University of Kentucky, Lexington KY USA, Directorate of Engineering, Division of Chemical, Bioengineering, Environmental, and Transport Systems, National Science Foundation, Alexandria VA USA
Publication Date:
Grant/Contract Number:
AC36-08GO28308
Type:
Publisher's Accepted Manuscript
Journal Name:
Federation of European Biochemical Societies (FEBS) Journal
Additional Journal Information:
Journal Name: Federation of European Biochemical Societies (FEBS) Journal Journal Volume: 285 Journal Issue: 12; Journal ID: ISSN 1742-464X
Publisher:
Wiley-Blackwell
Sponsoring Org:
USDOE
Country of Publication:
United Kingdom
Language:
English
OSTI Identifier:
1434537

Liu, Bing, Kognole, Abhishek A., Wu, Miao, Westereng, Bjørge, Crowley, Michael F., Kim, Seonah, Dimarogona, Maria, Payne, Christina M., and Sandgren, Mats. Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare reveal amino acids important for substrate recognition. United Kingdom: N. p., Web. doi:10.1111/febs.14472.
Liu, Bing, Kognole, Abhishek A., Wu, Miao, Westereng, Bjørge, Crowley, Michael F., Kim, Seonah, Dimarogona, Maria, Payne, Christina M., & Sandgren, Mats. Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare reveal amino acids important for substrate recognition. United Kingdom. doi:10.1111/febs.14472.
Liu, Bing, Kognole, Abhishek A., Wu, Miao, Westereng, Bjørge, Crowley, Michael F., Kim, Seonah, Dimarogona, Maria, Payne, Christina M., and Sandgren, Mats. 2018. "Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare reveal amino acids important for substrate recognition". United Kingdom. doi:10.1111/febs.14472.
@article{osti_1434537,
title = {Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare reveal amino acids important for substrate recognition},
author = {Liu, Bing and Kognole, Abhishek A. and Wu, Miao and Westereng, Bjørge and Crowley, Michael F. and Kim, Seonah and Dimarogona, Maria and Payne, Christina M. and Sandgren, Mats},
abstractNote = {},
doi = {10.1111/febs.14472},
journal = {Federation of European Biochemical Societies (FEBS) Journal},
number = 12,
volume = 285,
place = {United Kingdom},
year = {2018},
month = {4}
}

Works referenced in this record:

Novel enzymes for the degradation of cellulose
journal, January 2012
  • Horn, Svein; Vaaje-Kolstad, Gustav; Westereng, Bj�rge
  • Biotechnology for Biofuels, Vol. 5, Issue 1, Article No. 45
  • DOI: 10.1186/1754-6834-5-45

Scalable molecular dynamics with NAMD
journal, January 2005
  • Phillips, James C.; Braun, Rosemary; Wang, Wei
  • Journal of Computational Chemistry, Vol. 26, Issue 16, p. 1781-1802
  • DOI: 10.1002/jcc.20289

Stimulation of Lignocellulosic Biomass Hydrolysis by Proteins of Glycoside Hydrolase Family 61 Structure and Function of a Large, Enigmatic Family
journal, April 2010
  • Harris, Paul; Welner, Ditte; McFarland, K.
  • Biochemistry, Vol. 49, Issue 15, p. 3305-3316
  • DOI: 10.1021/bi100009p

An Oxidative Enzyme Boosting the Enzymatic Conversion of Recalcitrant Polysaccharides
journal, October 2010
  • Vaaje-Kolstad, Gustav; Westereng, Bj�rge; Horn, Svein J.
  • Science, Vol. 330, Issue 6001, p. 219-222
  • DOI: 10.1126/science.1192231

Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components
journal, August 2011
  • Quinlan, R. J.; Sweeney, M. D.; Lo Leggio, L.
  • Proceedings of the National Academy of Sciences, Vol. 108, Issue 37, p. 15079-15084
  • DOI: 10.1073/pnas.1105776108

Structural Basis for Substrate Targeting and Catalysis by Fungal Polysaccharide Monooxygenases
journal, June 2012
  • Li, Xin; Beeson, William�T.; Phillips, Christopher�M.
  • Structure, Vol. 20, Issue 6, p. 1051-1061
  • DOI: 10.1016/j.str.2012.04.002

Coot model-building tools for molecular graphics
journal, November 2004
  • Emsley, Paul; Cowtan, Kevin
  • Acta Crystallographica Section D Biological Crystallography, Vol. 60, Issue 12, p. 2126-2132
  • DOI: 10.1107/S0907444904019158

Oxidoreductive Cellulose Depolymerization by the Enzymes Cellobiose Dehydrogenase and Glycoside Hydrolase 61
journal, August 2011
  • Langston, James A.; Shaghasi, Tarana; Abbate, Eric
  • Applied and Environmental Microbiology, Vol. 77, Issue 19, p. 7007-7015
  • DOI: 10.1128/AEM.05815-11

PHENIX: a comprehensive Python-based system for macromolecular structure solution
journal, January 2010
  • Adams, Paul D.; Afonine, Pavel V.; Bunk�czi, G�bor
  • Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221
  • DOI: 10.1107/S0907444909052925

The First Structure of a Glycoside Hydrolase Family 61 Member, Cel61B from Hypocrea jecorina, at 1.6�� Resolution
journal, October 2008
  • Karkehabadi, Saeid; Hansson, Henrik; Kim, Steve
  • Journal of Molecular Biology, Vol. 383, Issue 1, p. 144-154
  • DOI: 10.1016/j.jmb.2008.08.016