DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Structural characterization of a non-heme iron active site in zeolites that hydroxylates methane

Abstract

Iron-containing zeolites exhibit unprecedented reactivity in the low-temperature hydroxylation of methane to form methanol. Reactivity occurs at a mononuclear ferrous active site, α-Fe(II), that is activated by N2O to form the reactive intermediate α-O. This has been defined as an Fe(IV)=O species. Using nuclear resonance vibrational spectroscopy coupled to X-ray absorption spectroscopy, we probe the bonding interaction between the iron center, its zeolite lattice-derived ligands, and the reactive oxygen. α-O is found to contain an unusually strong Fe(IV)=O bond resulting from a constrained coordination geometry enforced by the zeolite lattice. As a result, density functional theory calculations clarify how the experimentally determined geometric structure of the active site leads to an electronic structure that is highly activated to perform H-atom abstraction.

Authors:
 [1];  [1];  [2];  [1];  [1];  [1]; ORCiD logo [3];  [3];  [3];  [4];  [5];  [2];  [2];  [5]
  1. Department of Chemistry, Stanford University, Stanford, CA 94305,
  2. Department of Microbial and Molecular Systems, Centre for Surface Chemistry and Catalysis, KU Leuven, B-3001 Leuven, Belgium,
  3. Advanced Photon Source, Argonne National Laboratory, Argonne, IL 60439,
  4. Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, CA 94025
  5. Department of Chemistry, Stanford University, Stanford, CA 94305,, Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, CA 94025
Publication Date:
Research Org.:
SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States); Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Org.:
USDOE; National Science Foundation (NSF)
OSTI Identifier:
1430783
Alternate Identifier(s):
OSTI ID: 1457409; OSTI ID: 1466306
Grant/Contract Number:  
AC02-06CH11357; CHE-1660611; G0A2216N; P41GM103393; DGE-11474; AC02-76SF00515
Resource Type:
Published Article
Journal Name:
Proceedings of the National Academy of Sciences of the United States of America
Additional Journal Information:
Journal Name: Proceedings of the National Academy of Sciences of the United States of America Journal Volume: 115 Journal Issue: 18; Journal ID: ISSN 0027-8424
Publisher:
Proceedings of the National Academy of Sciences
Country of Publication:
United States
Language:
English
Subject:
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND TECHNOLOGY; 36 MATERIALS SCIENCE; nuclear resonance vibrational spectroscopy; X-ray absorption spectroscopy; density functional theory; zeolites; methane partial oxidation

Citation Formats

Snyder, Benjamin E. R., Böttger, Lars H., Bols, Max L., Yan, James J., Rhoda, Hannah M., Jacobs, Ariel B., Hu, Michael Y., Zhao, Jiyong, Alp, E. Ercan, Hedman, Britt, Hodgson, Keith O., Schoonheydt, Robert A., Sels, Bert F., and Solomon, Edward I. Structural characterization of a non-heme iron active site in zeolites that hydroxylates methane. United States: N. p., 2018. Web. doi:10.1073/pnas.1721717115.
Snyder, Benjamin E. R., Böttger, Lars H., Bols, Max L., Yan, James J., Rhoda, Hannah M., Jacobs, Ariel B., Hu, Michael Y., Zhao, Jiyong, Alp, E. Ercan, Hedman, Britt, Hodgson, Keith O., Schoonheydt, Robert A., Sels, Bert F., & Solomon, Edward I. Structural characterization of a non-heme iron active site in zeolites that hydroxylates methane. United States. https://doi.org/10.1073/pnas.1721717115
Snyder, Benjamin E. R., Böttger, Lars H., Bols, Max L., Yan, James J., Rhoda, Hannah M., Jacobs, Ariel B., Hu, Michael Y., Zhao, Jiyong, Alp, E. Ercan, Hedman, Britt, Hodgson, Keith O., Schoonheydt, Robert A., Sels, Bert F., and Solomon, Edward I. Mon . "Structural characterization of a non-heme iron active site in zeolites that hydroxylates methane". United States. https://doi.org/10.1073/pnas.1721717115.
@article{osti_1430783,
title = {Structural characterization of a non-heme iron active site in zeolites that hydroxylates methane},
author = {Snyder, Benjamin E. R. and Böttger, Lars H. and Bols, Max L. and Yan, James J. and Rhoda, Hannah M. and Jacobs, Ariel B. and Hu, Michael Y. and Zhao, Jiyong and Alp, E. Ercan and Hedman, Britt and Hodgson, Keith O. and Schoonheydt, Robert A. and Sels, Bert F. and Solomon, Edward I.},
abstractNote = {Iron-containing zeolites exhibit unprecedented reactivity in the low-temperature hydroxylation of methane to form methanol. Reactivity occurs at a mononuclear ferrous active site, α-Fe(II), that is activated by N2O to form the reactive intermediate α-O. This has been defined as an Fe(IV)=O species. Using nuclear resonance vibrational spectroscopy coupled to X-ray absorption spectroscopy, we probe the bonding interaction between the iron center, its zeolite lattice-derived ligands, and the reactive oxygen. α-O is found to contain an unusually strong Fe(IV)=O bond resulting from a constrained coordination geometry enforced by the zeolite lattice. As a result, density functional theory calculations clarify how the experimentally determined geometric structure of the active site leads to an electronic structure that is highly activated to perform H-atom abstraction.},
doi = {10.1073/pnas.1721717115},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
number = 18,
volume = 115,
place = {United States},
year = {Mon Apr 02 00:00:00 EDT 2018},
month = {Mon Apr 02 00:00:00 EDT 2018}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1073/pnas.1721717115

Citation Metrics:
Cited by: 56 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

Copper coordination in blue proteins
journal, October 2000

  • Gray, Harry B.; Malmström, Bo G.; Williams, R. J. P.
  • JBIC Journal of Biological Inorganic Chemistry, Vol. 5, Issue 5
  • DOI: 10.1007/s007750000146

The role of iron in N2O decomposition on ZSM-5 zeolite and reactivity of the surface oxygen formed
journal, July 1990


The Crystal Structure of a High-Spin Oxoiron(IV) Complex and Characterization of Its Self-Decay Pathway
journal, June 2010

  • England, Jason; Guo, Yisong; Farquhar, Erik R.
  • Journal of the American Chemical Society, Vol. 132, Issue 25
  • DOI: 10.1021/ja100366c

Nuclear Resonance Vibrational Spectroscopy on the FeIVO S=2 Non-Heme Site in TMG3tren: Experimentally Calibrated Insights into Reactivity
journal, March 2011

  • Wong, Shaun D.; Bell, Caleb B.; Liu, Lei V.
  • Angewandte Chemie International Edition, Vol. 50, Issue 14
  • DOI: 10.1002/anie.201007692

Structures of Nonheme Oxoiron(IV) Complexes from X-ray Crystallography, NMR Spectroscopy, and DFT Calculations
journal, June 2005

  • Klinker, Eric J.; Kaizer, József; Brennessel, William W.
  • Angewandte Chemie International Edition, Vol. 44, Issue 24
  • DOI: 10.1002/anie.200500485

A systematic x-ray absorption study of molybdenum complexes. The accuracy of structural information from extended x-ray absorption fine structure
journal, April 1978

  • Cramer, Stephen P.; Hodgson, Keith O.; Stiefel, Edward I.
  • Journal of the American Chemical Society, Vol. 100, Issue 9
  • DOI: 10.1021/ja00477a030

Redox Potential and C−H Bond Cleaving Properties of a Nonheme Fe IV ═O Complex in Aqueous Solution
journal, June 2010

  • Wang, Dong; Zhang, Mo; Bühlmann, Philippe
  • Journal of the American Chemical Society, Vol. 132, Issue 22
  • DOI: 10.1021/ja909923w

The active site of low-temperature methane hydroxylation in iron-containing zeolites
journal, August 2016

  • Snyder, Benjamin E. R.; Vanelderen, Pieter; Bols, Max L.
  • Nature, Vol. 536, Issue 7616
  • DOI: 10.1038/nature19059

Further insights into the mechanism of the reaction of activated bleomycin with DNA
journal, August 2008

  • Chow, M. S.; Liu, L. V.; Solomon, E. I.
  • Proceedings of the National Academy of Sciences, Vol. 105, Issue 36
  • DOI: 10.1073/pnas.0806378105

CaFeO 2 : A New Type of Layered Structure with Iron in a Distorted Square Planar Coordination
journal, January 2009

  • Tassel, Cédric; Pruneda, José Miguel; Hayashi, Naoaki
  • Journal of the American Chemical Society, Vol. 131, Issue 1
  • DOI: 10.1021/ja8072269

Nonheme Fe IV O Complexes That Can Oxidize the C−H Bonds of Cyclohexane at Room Temperature
journal, January 2004

  • Kaizer, József; Klinker, Eric J.; Oh, Na Young
  • Journal of the American Chemical Society, Vol. 126, Issue 2
  • DOI: 10.1021/ja037288n

Infinite-layer iron oxide with a square-planar coordination
journal, December 2007

  • Tsujimoto, Y.; Tassel, C.; Hayashi, N.
  • Nature, Vol. 450, Issue 7172, p. 1062-1065
  • DOI: 10.1038/nature06382

Application of Badger's Rule to Heme and Non-Heme Iron−Oxygen Bonds:  An Examination of Ferryl Protonation States
journal, February 2006

  • Green, Michael T.
  • Journal of the American Chemical Society, Vol. 128, Issue 6
  • DOI: 10.1021/ja054074s

Electronic Structure of the Ferryl Intermediate in the α-Ketoglutarate Dependent Non-Heme Iron Halogenase SyrB2: Contributions to H Atom Abstraction Reactivity
journal, April 2016

  • Srnec, Martin; Wong, Shaun D.; Matthews, Megan L.
  • Journal of the American Chemical Society, Vol. 138, Issue 15
  • DOI: 10.1021/jacs.6b01151

Theoretical relations among rate constants, barriers, and Broensted slopes of chemical reactions
journal, March 1968

  • Marcus, Rudolph A.
  • The Journal of Physical Chemistry, Vol. 72, Issue 3
  • DOI: 10.1021/j100849a019

A More Reactive Trigonal-Bipyramidal High-Spin Oxoiron(IV) Complex with a cis-Labile Site
journal, August 2011

  • England, Jason; Guo, Yisong; Van Heuvelen, Katherine M.
  • Journal of the American Chemical Society, Vol. 133, Issue 31
  • DOI: 10.1021/ja2040909

X-ray Absorption Pre-Edge Studies of High-spin Iron(II) Complexes
journal, March 1995

  • Randall, Clayton R.; Shu, Lijin; Chiou, Yu-Min
  • Inorganic Chemistry, Vol. 34, Issue 5
  • DOI: 10.1021/ic00109a007

Unmasking of Deuterium Kinetic Isotope Effects on the Methane Monooxygenase Compound Q Reaction by Site-Directed Mutagenesis of Component B
journal, October 2001

  • Brazeau, Brian J.; Wallar, Bradley J.; Lipscomb, John D.
  • Journal of the American Chemical Society, Vol. 123, Issue 42
  • DOI: 10.1021/ja016632i

High-valent nonheme iron-oxo complexes: Synthesis, structure, and spectroscopy
journal, January 2013


A Multiplet Analysis of Fe K-Edge 1s → 3d Pre-Edge Features of Iron Complexes
journal, July 1997

  • Westre, Tami E.; Kennepohl, Pierre; DeWitt, Jane G.
  • Journal of the American Chemical Society, Vol. 119, Issue 27
  • DOI: 10.1021/ja964352a

Elucidation of the Fe(iv)=O intermediate in the catalytic cycle of the halogenase SyrB2
journal, July 2013

  • Wong, Shaun D.; Srnec, Martin; Matthews, Megan L.
  • Nature, Vol. 499, Issue 7458
  • DOI: 10.1038/nature12304

Siting and Distribution of Framework Aluminium Atoms in Silicon-Rich Zeolites and Impact on Catalysis
journal, April 2012


A Combined NRVS and DFT Study of Fe IV O Model Complexes: A Diagnostic Method for the Elucidation of Non-Heme Iron Enzyme Intermediates
journal, November 2008

  • Bell, Caleb B.; Wong, Shaun D.; Xiao, Yuming
  • Angewandte Chemie International Edition, Vol. 47, Issue 47
  • DOI: 10.1002/anie.200803740

Spectroscopic and electronic structure studies of aromatic electrophilic attack and hydrogen-atom abstraction by non-heme iron enzymes
journal, August 2006

  • Neidig, M. L.; Decker, A.; Choroba, O. W.
  • Proceedings of the National Academy of Sciences, Vol. 103, Issue 35
  • DOI: 10.1073/pnas.0605067103

Axial Ligand Effects on the Geometric and Electronic Structures of Nonheme Oxoiron(IV) Complexes
journal, September 2008

  • Jackson, Timothy A.; Rohde, Jan-Uwe; Seo, Mi Sook
  • Journal of the American Chemical Society, Vol. 130, Issue 37
  • DOI: 10.1021/ja8022576

Nuclear resonance vibrational spectroscopy ? NRVS
journal, January 2005


A Synthetic High-Spin Oxoiron(IV) Complex: Generation, Spectroscopic Characterization, and Reactivity
journal, May 2009

  • England, Jason; Martinho, Marlène; Farquhar, Erik R.
  • Angewandte Chemie International Edition, Vol. 48, Issue 20
  • DOI: 10.1002/anie.200900863

Spectroscopic and Reactivity Comparisons of a Pair of bTAML Complexes with Fe V ═O and Fe IV ═O Units
journal, May 2017