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Title: Combinatorial pathway engineering using type I-E CRISPR interference

Authors:
 [1];  [2];  [3]; ORCiD logo [4]
  1. Chemical and Biological Engineering Department, University of Colorado Boulder, Boulder Colorado
  2. Renewable and Sustainable Energy Institute (RASEI), University of Colorado Boulder, Boulder Colorado
  3. Muse Biotechnology, Boulder Colorado
  4. Chemical and Biological Engineering Department, University of Colorado Boulder, Boulder Colorado, Renewable and Sustainable Energy Institute (RASEI), University of Colorado Boulder, Boulder Colorado
Publication Date:
Sponsoring Org.:
USDOE
OSTI Identifier:
1430735
Grant/Contract Number:  
SC0008812
Resource Type:
Publisher's Accepted Manuscript
Journal Name:
Biotechnology and Bioengineering
Additional Journal Information:
Journal Name: Biotechnology and Bioengineering Journal Volume: 115 Journal Issue: 7; Journal ID: ISSN 0006-3592
Publisher:
Wiley Blackwell (John Wiley & Sons)
Country of Publication:
United States
Language:
English

Citation Formats

Tarasava, Katia, Liu, Rongming, Garst, Andrew, and Gill, Ryan T. Combinatorial pathway engineering using type I-E CRISPR interference. United States: N. p., 2018. Web. doi:10.1002/bit.26589.
Tarasava, Katia, Liu, Rongming, Garst, Andrew, & Gill, Ryan T. Combinatorial pathway engineering using type I-E CRISPR interference. United States. doi:10.1002/bit.26589.
Tarasava, Katia, Liu, Rongming, Garst, Andrew, and Gill, Ryan T. Fri . "Combinatorial pathway engineering using type I-E CRISPR interference". United States. doi:10.1002/bit.26589.
@article{osti_1430735,
title = {Combinatorial pathway engineering using type I-E CRISPR interference},
author = {Tarasava, Katia and Liu, Rongming and Garst, Andrew and Gill, Ryan T.},
abstractNote = {},
doi = {10.1002/bit.26589},
journal = {Biotechnology and Bioengineering},
number = 7,
volume = 115,
place = {United States},
year = {2018},
month = {3}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
DOI: 10.1002/bit.26589

Citation Metrics:
Cited by: 2 works
Citation information provided by
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Works referenced in this record:

Production of 3-hydroxypropionic acid via malonyl-CoA pathway using recombinant Escherichia coli strains
journal, February 2012

  • Rathnasingh, Chelladurai; Raj, Subramanian Mohan; Lee, Youjin
  • Journal of Biotechnology, Vol. 157, Issue 4, p. 633-640
  • DOI: 10.1016/j.jbiotec.2011.06.008

Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
journal, February 2013


Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation
journal, October 2014


Beyond editing: repurposing CRISPR–Cas9 for precision genome regulation and interrogation
journal, December 2015

  • Dominguez, Antonia A.; Lim, Wendell A.; Qi, Lei S.
  • Nature Reviews Molecular Cell Biology, Vol. 17, Issue 1
  • DOI: 10.1038/nrm.2015.2

Repurposing endogenous type I CRISPR-Cas systems for programmable gene repression
journal, October 2014

  • Luo, Michelle L.; Mullis, Adam S.; Leenay, Ryan T.
  • Nucleic Acids Research, Vol. 43, Issue 1
  • DOI: 10.1093/nar/gku971

Universal sample preparation method for proteome analysis
journal, April 2009

  • Wiśniewski, Jacek R.; Zougman, Alexandre; Nagaraj, Nagarjuna
  • Nature Methods, Vol. 6, Issue 5
  • DOI: 10.1038/nmeth.1322

Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system
journal, June 2013

  • Bikard, David; Jiang, Wenyan; Samai, Poulami
  • Nucleic Acids Research, Vol. 41, Issue 15
  • DOI: 10.1093/nar/gkt520

Expression and characterization of the type III polyketide synthase 1,3,6,8-tetrahydroxynaphthalene synthase from Streptomyces coelicolor A3(2)
journal, August 2003

  • Izumikawa, Miho; Shipley, Paul R.; Hopke, J�rn N.
  • Journal of Industrial Microbiology and Biotechnology, Vol. 30, Issue 8
  • DOI: 10.1007/s10295-003-0075-8

Production of polyhydroxyalkanoates by Escherichia coli mutants with defected mixed acid fermentation pathways
journal, June 2010

  • Jian, Jia; Zhang, Shao-Qin; Shi, Zhen-Yu
  • Applied Microbiology and Biotechnology, Vol. 87, Issue 6
  • DOI: 10.1007/s00253-010-2706-0

Automated design of synthetic ribosome binding sites to control protein expression
journal, October 2009

  • Salis, Howard M.; Mirsky, Ethan A.; Voigt, Christopher A.
  • Nature Biotechnology, Vol. 27, Issue 10, p. 946-950
  • DOI: 10.1038/nbt.1568

Structural basis for CRISPR RNA-guided DNA recognition by Cascade
journal, April 2011

  • Jore, Matthijs M.; Lundgren, Magnus; van Duijn, Esther
  • Nature Structural & Molecular Biology, Vol. 18, Issue 5
  • DOI: 10.1038/nsmb.2019

Directed PCR-free engineering of highly repetitive DNA sequences
journal, January 2011


Functional balance between enzymes in malonyl-CoA pathway for 3-hydroxypropionate biosynthesis
journal, March 2016


Improving cellular malonyl-CoA level in Escherichia coli via metabolic engineering
journal, May 2009

  • Zha, Wenjuan; Rubin-Pitel, Sheryl B.; Shao, Zengyi
  • Metabolic Engineering, Vol. 11, Issue 3, p. 192-198
  • DOI: 10.1016/j.ymben.2009.01.005

CRISPathBrick: Modular Combinatorial Assembly of Type II-A CRISPR Arrays for dCas9-Mediated Multiplex Transcriptional Repression in E. coli
journal, April 2015

  • Cress, Brady F.; Toparlak, Ö. Duhan; Guleria, Sanjay
  • ACS Synthetic Biology, Vol. 4, Issue 9
  • DOI: 10.1021/acssynbio.5b00012

Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes
journal, August 2008

  • Brouns, S. J. J.; Jore, M. M.; Lundgren, M.
  • Science, Vol. 321, Issue 5891, p. 960-964
  • DOI: 10.1126/science.1159689

CRISPR interference (CRISPRi) for sequence-specific control of gene expression
journal, October 2013

  • Larson, Matthew H.; Gilbert, Luke A.; Wang, Xiaowo
  • Nature Protocols, Vol. 8, Issue 11
  • DOI: 10.1038/nprot.2013.132

Efficient programmable gene silencing by Cascade
journal, November 2014

  • Rath, Devashish; Amlinger, Lina; Hoekzema, Mirthe
  • Nucleic Acids Research, Vol. 43, Issue 1
  • DOI: 10.1093/nar/gku1257

Synthetic promoter libraries – tuning of gene expression
journal, February 2006