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Title: Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED

Electrons, because of their strong interaction with matter, produce high-resolution diffraction patterns from tiny 3D crystals only a few hundred nanometers thick in a frozen-hydrated state. This discovery offers the prospect of facile structure determination of complex biological macromolecules, which cannot be coaxed to form crystals large enough for conventional crystallography or cannot easily be produced in sufficient quantities. Two potential obstacles stand in the way. The first is a phenomenon known as dynamical scattering, in which multiple scattering events scramble the recorded electron diffraction intensities so that they are no longer informative of the crystallized molecule. The second obstacle is the lack of a proven means of de novo phase determination, as is required if the molecule crystallized is insufficiently similar to one that has been previously determined.We showwith four structures of the amyloid core of the Sup35 prion protein that, if the diffraction resolution is high enough, sufficiently accurate phases can be obtained by direct methods with the cryo-EM method microelectron diffraction (MicroED), just as in X-ray diffraction. The success of these four experiments dispels the concern that dynamical scattering is an obstacle to ab initio phasing by MicroED and suggests that structures of novel macromolecules can alsomore » be determined by direct methods.« less
Authors:
 [1] ;  [1] ;  [1] ;  [1] ;  [2] ;  [2] ; ORCiD logo [2] ;  [2] ;  [1]
  1. Univ. of California, Los Angeles, CA (United States)
  2. Howard Hughes Medical Inst., Ashburn, VA (United States)
Publication Date:
Grant/Contract Number:
FC02-02ER63421
Type:
Accepted Manuscript
Journal Name:
Proceedings of the National Academy of Sciences of the United States of America
Additional Journal Information:
Journal Volume: 113; Journal Issue: 40; Journal ID: ISSN 0027-8424
Publisher:
National Academy of Sciences, Washington, DC (United States)
Research Org:
Univ. of California, Los Angeles, CA (United States)
Sponsoring Org:
USDOE
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; phasing; prion; electron; diffraction; MicroED; nanocrystal
OSTI Identifier:
1425979

Sawaya, Michael R., Rodriguez, Jose, Cascio, Duilio, Collazo, Michael J., Shi, Dan, Reyes, Francis E., Hattne, Johan, Gonen, Tamir, and Eisenberg, David S.. Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED. United States: N. p., Web. doi:10.1073/pnas.1606287113.
Sawaya, Michael R., Rodriguez, Jose, Cascio, Duilio, Collazo, Michael J., Shi, Dan, Reyes, Francis E., Hattne, Johan, Gonen, Tamir, & Eisenberg, David S.. Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED. United States. doi:10.1073/pnas.1606287113.
Sawaya, Michael R., Rodriguez, Jose, Cascio, Duilio, Collazo, Michael J., Shi, Dan, Reyes, Francis E., Hattne, Johan, Gonen, Tamir, and Eisenberg, David S.. 2016. "Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED". United States. doi:10.1073/pnas.1606287113. https://www.osti.gov/servlets/purl/1425979.
@article{osti_1425979,
title = {Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED},
author = {Sawaya, Michael R. and Rodriguez, Jose and Cascio, Duilio and Collazo, Michael J. and Shi, Dan and Reyes, Francis E. and Hattne, Johan and Gonen, Tamir and Eisenberg, David S.},
abstractNote = {Electrons, because of their strong interaction with matter, produce high-resolution diffraction patterns from tiny 3D crystals only a few hundred nanometers thick in a frozen-hydrated state. This discovery offers the prospect of facile structure determination of complex biological macromolecules, which cannot be coaxed to form crystals large enough for conventional crystallography or cannot easily be produced in sufficient quantities. Two potential obstacles stand in the way. The first is a phenomenon known as dynamical scattering, in which multiple scattering events scramble the recorded electron diffraction intensities so that they are no longer informative of the crystallized molecule. The second obstacle is the lack of a proven means of de novo phase determination, as is required if the molecule crystallized is insufficiently similar to one that has been previously determined.We showwith four structures of the amyloid core of the Sup35 prion protein that, if the diffraction resolution is high enough, sufficiently accurate phases can be obtained by direct methods with the cryo-EM method microelectron diffraction (MicroED), just as in X-ray diffraction. The success of these four experiments dispels the concern that dynamical scattering is an obstacle to ab initio phasing by MicroED and suggests that structures of novel macromolecules can also be determined by direct methods.},
doi = {10.1073/pnas.1606287113},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
number = 40,
volume = 113,
place = {United States},
year = {2016},
month = {9}
}

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