DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: The linac coherent light source single particle imaging road map

Authors:
 [1];  [2];  [3];  [3];  [3];  [3];  [4];  [4];  [5];  [6];  [7];  [8];  [3];  [3];  [3];  [9];  [3];  [10];  [11];  [5] more »;  [12];  [13];  [14];  [15];  [16];  [17];  [18];  [4];  [19];  [20] « less
  1. SLAC National Accelerator Lab., Menlo Park, CA (United States); European XFEL GmbH, Hamburg (Germany)
  2. Center for Free-Electron Laser Science, Hamburg (Germany)
  3. SLAC National Accelerator Lab., Menlo Park, CA (United States)
  4. SLAC National Accelerator Lab., Menlo Park, CA (United States); Stanford Univ., Stanford, CA (United States)
  5. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
  6. Chinese Academy of Sciences, Shanghai (China); Shanghai Tech Univ., Shanghai (China)
  7. Monash Univ., Melbourne, VIC (Australia); ARC Centre of Excellence for Advanced Molecular Imaging, Clayton (Australia)
  8. SLAC National Accelerator Lab., Menlo Park, CA (United States); Cornell Univ., Ithaca, NY (United States)
  9. Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)
  10. Univ. of Buffalo, Buffalo, NY (United States); Hauptman-Woodward Institute, Buffalo, NY (United States)
  11. Uppsala Univ. (Sweden); Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
  12. Univ. of Wisconsin, Milwaukee, WI (United States)
  13. SLAC National Accelerator Lab., Menlo Park, CA (United States); UCLA, Los Angeles, CA (United States
  14. Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany); Univ. of Hamburg, Hamburg (Germany)
  15. Max Planck Institute for Medical Research, Heidelberg (Germany)
  16. Deutsches Elektronen-Synchrotron (DESY), Hamburg (Germany)
  17. Arizona State Univ., Tempe, AZ (United States)
  18. Arizona State Univ., Tempe, AZ (United States); National Research Nuclear Univ., Moscow (Russia)
  19. Stanford Univ., Stanford, CA (United States)
  20. SLAC National Accelerator Lab., Menlo Park, CA (United States); Brookhaven National Lab. (BNL), Upton, NY (United States)
Publication Date:
Research Org.:
SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States); Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES); USDOE National Nuclear Security Administration (NNSA)
OSTI Identifier:
1190865
Alternate Identifier(s):
OSTI ID: 1261129; OSTI ID: 1421051; OSTI ID: 1890086
Report Number(s):
LLNL-JRNL-669400
Journal ID: ISSN 2329-7778; SDTYAE
Grant/Contract Number:  
AC02-76SF00515; FG02-09ER16114; AC52-07NA27344; STC 1231306; 05K2012
Resource Type:
Accepted Manuscript
Journal Name:
Structural Dynamics
Additional Journal Information:
Journal Volume: 2; Journal Issue: 4; Journal ID: ISSN 2329-7778
Publisher:
American Crystallographic Association/AIP
Country of Publication:
United States
Language:
English
Subject:
75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY; Physics

Citation Formats

Aquila, A., Barty, A., Bostedt, C., Boutet, S., Carini, G., dePonte, D., Drell, P., Doniach, S., Downing, K. H., Earnest, T., Elmlund, H., Elser, V., Gühr, M., Hajdu, J., Hastings, J., Hau-Riege, S. P., Huang, Z., Lattman, E. E., Maia, F. R.N.C., Marchesini, S., Ourmazd, A., Pellegrini, C., Santra, R., Schlichting, I., Schroer, C., Spence, J. C. H., Vartanyants, I. A., Wakatsuki, S., Weis, W. I., and Williams, G. J. The linac coherent light source single particle imaging road map. United States: N. p., 2015. Web. doi:10.1063/1.4918726.
Aquila, A., Barty, A., Bostedt, C., Boutet, S., Carini, G., dePonte, D., Drell, P., Doniach, S., Downing, K. H., Earnest, T., Elmlund, H., Elser, V., Gühr, M., Hajdu, J., Hastings, J., Hau-Riege, S. P., Huang, Z., Lattman, E. E., Maia, F. R.N.C., Marchesini, S., Ourmazd, A., Pellegrini, C., Santra, R., Schlichting, I., Schroer, C., Spence, J. C. H., Vartanyants, I. A., Wakatsuki, S., Weis, W. I., & Williams, G. J. The linac coherent light source single particle imaging road map. United States. https://doi.org/10.1063/1.4918726
Aquila, A., Barty, A., Bostedt, C., Boutet, S., Carini, G., dePonte, D., Drell, P., Doniach, S., Downing, K. H., Earnest, T., Elmlund, H., Elser, V., Gühr, M., Hajdu, J., Hastings, J., Hau-Riege, S. P., Huang, Z., Lattman, E. E., Maia, F. R.N.C., Marchesini, S., Ourmazd, A., Pellegrini, C., Santra, R., Schlichting, I., Schroer, C., Spence, J. C. H., Vartanyants, I. A., Wakatsuki, S., Weis, W. I., and Williams, G. J. Wed . "The linac coherent light source single particle imaging road map". United States. https://doi.org/10.1063/1.4918726. https://www.osti.gov/servlets/purl/1190865.
@article{osti_1190865,
title = {The linac coherent light source single particle imaging road map},
author = {Aquila, A. and Barty, A. and Bostedt, C. and Boutet, S. and Carini, G. and dePonte, D. and Drell, P. and Doniach, S. and Downing, K. H. and Earnest, T. and Elmlund, H. and Elser, V. and Gühr, M. and Hajdu, J. and Hastings, J. and Hau-Riege, S. P. and Huang, Z. and Lattman, E. E. and Maia, F. R.N.C. and Marchesini, S. and Ourmazd, A. and Pellegrini, C. and Santra, R. and Schlichting, I. and Schroer, C. and Spence, J. C. H. and Vartanyants, I. A. and Wakatsuki, S. and Weis, W. I. and Williams, G. J.},
abstractNote = {},
doi = {10.1063/1.4918726},
journal = {Structural Dynamics},
number = 4,
volume = 2,
place = {United States},
year = {Wed Jul 01 00:00:00 EDT 2015},
month = {Wed Jul 01 00:00:00 EDT 2015}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record

Citation Metrics:
Cited by: 133 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

Single mimivirus particles intercepted and imaged with an X-ray laser
journal, February 2011

  • Seibert, M. Marvin; Ekeberg, Tomas; Maia, Filipe R. N. C.
  • Nature, Vol. 470, Issue 7332
  • DOI: 10.1038/nature09748

A reconstruction algorithm for single-particle diffraction imaging experiments
journal, August 2009

  • Loh, Duane Ne-Te; Elser, Veit
  • Acta Crystallographica Section A Foundations of Crystallography, Vol. 65, Issue a1
  • DOI: 10.1107/s0108767309098584

X-Ray Diffraction from Isolated and Strongly Aligned Gas-Phase Molecules with a Free-Electron Laser
text, January 2014

  • Küpper, Jochen; Stern, Stephan; Holmegaard, Lotte
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/desy-2014-02460

Invited Article: A unified evaluation of iterative projection algorithms for phase retrieval
journal, January 2007

  • Marchesini, S.
  • Review of Scientific Instruments, Vol. 78, Issue 1
  • DOI: 10.1063/1.2403783

Structure from fleeting illumination of faint spinning objects in flight
journal, November 2008

  • Fung, Russell; Shneerson, Valentin; Saldin, Dilano K.
  • Nature Physics, Vol. 5, Issue 1
  • DOI: 10.1038/nphys1129

Structural variability and the incoherent addition of scattered intensities in single-particle diffraction
journal, September 2009


Toward unsupervised single-shot diffractive imaging of heterogeneous particles using X-ray free-electron lasers
text, January 2013

  • Park, Hyung Joo; Loh, N. Duane; Sierra, Raymond G.
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/desy-2013-01295

Femtosecond dark-field imaging with an X-ray free electron laser
journal, January 2012

  • Martin, A. V.; Loh, N. D.; Hampton, C. Y.
  • Optics Express, Vol. 20, Issue 12
  • DOI: 10.1364/OE.20.013501

Three-Dimensional Reconstruction of the Giant Mimivirus Particle with an X-Ray Free-Electron Laser
journal, March 2015


X-Ray Diffraction from Isolated and Strongly Aligned Gas-Phase Molecules with a Free-Electron Laser
journal, February 2014


Femtosecond electronic response of atoms to ultra-intense X-rays
journal, July 2010


Impact of hollow-atom formation on coherent x-ray scattering at high intensity
journal, March 2011


X-ray atomic scattering factors of low- Z ions with a core hole
journal, October 2007


Reconstruction algorithm for single-particle diffraction imaging experiments
journal, August 2009


Coherent lensless X-ray imaging
journal, November 2010


Structural variability and the incoherent addition of scattered intensities in single-particle diffraction
text, January 2009

  • Maia, F. R. N. C.; Ekeberg, T.; Timneanu, N.
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/phppubdb-14443

Incoherent x-ray scattering in single molecule imaging
text, January 2014


Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight
journal, June 2012

  • Loh, N. D.; Hampton, C. Y.; Martin, A. V.
  • Nature, Vol. 486, Issue 7404
  • DOI: 10.1038/nature11222

Imaging single cells in a beam of live cyanobacteria with an X-ray laser
journal, February 2015

  • van der Schot, Gijs; Svenda, Martin; Maia, Filipe R. N. C.
  • Nature Communications, Vol. 6, Issue 1
  • DOI: 10.1038/ncomms6704

Shapes and vorticities of superfluid helium nanodroplets
journal, August 2014


Incoherent x-ray scattering in single molecule imaging
journal, July 2014


Potential for biomolecular imaging with femtosecond X-ray pulses
journal, August 2000

  • Neutze, Richard; Wouts, Remco; van der Spoel, David
  • Nature, Vol. 406, Issue 6797
  • DOI: 10.1038/35021099

Size-Dependent Ultrafast Ionization Dynamics of Nanoscale Samples in Intense Femtosecond X-Ray Free-Electron-Laser Pulses
journal, June 2012


High-throughput imaging of heterogeneous cell organelles with an X-ray laser
journal, November 2014


X-ray atomic scattering factors of low- Z ions with a core hole
text, January 2007


Potential for biomolecular imaging with femtosecond X-ray pulses
journal, August 2000

  • Neutze, Richard; Wouts, Remco; van der Spoel, David
  • Nature, Vol. 406, Issue 6797
  • DOI: 10.1038/35021099

Femtosecond electronic response of atoms to ultra-intense X-rays
journal, July 2010


Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight
journal, June 2012

  • Loh, N. D.; Hampton, C. Y.; Martin, A. V.
  • Nature, Vol. 486, Issue 7404
  • DOI: 10.1038/nature11222

Imaging single cells in a beam of live cyanobacteria with an X-ray laser
journal, February 2015

  • van der Schot, Gijs; Svenda, Martin; Maia, Filipe R. N. C.
  • Nature Communications, Vol. 6, Issue 1
  • DOI: 10.1038/ncomms6704

High-throughput imaging of heterogeneous cell organelles with an X-ray laser
journal, November 2014


Cryo-EM, XFELs and the structure conundrum in structural biology
journal, September 2019


Incoherent x-ray scattering in single molecule imaging
journal, July 2014


Photoelectron Dynamics in X-Ray Free-Electron-Laser Diffractive Imaging of Biological Samples
journal, June 2012


Encapsulation and Diffraction-Pattern-Correction Methods to Reduce the Effect of Damage in X-Ray Diffraction Imaging of Single Biological Molecules
journal, May 2007


Shapes and vorticities of superfluid helium nanodroplets
journal, August 2014


Femtosecond free-electron laser x-ray diffraction data sets for algorithm development
journal, January 2012

  • Kassemeyer, Stephan; Steinbrener, Jan; Lomb, Lukas
  • Optics Express, Vol. 20, Issue 4
  • DOI: 10.1364/oe.20.004149

Toward unsupervised single-shot diffractive imaging of heterogeneous particles using X-ray free-electron lasers
journal, January 2013

  • Park, Hyung Joo; Loh, N. Duane; Sierra, Raymond G.
  • Optics Express, Vol. 21, Issue 23
  • DOI: 10.1364/oe.21.028729

Works referencing / citing this record:

Simulations of ultrafast x–ray laser experiments
text, January 2017

  • Fortmann-Grote, C.; Andreev, A. A.; Appel, K.
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2017-10687

A comprehensive simulation framework for imaging single particles and biomolecules at the European X-ray Free-Electron Laser
journal, April 2016

  • Yoon, Chun Hong; Yurkov, Mikhail V.; Schneidmiller, Evgeny A.
  • Scientific Reports, Vol. 6, Issue 1
  • DOI: 10.1038/srep24791

Electrospray sample injection for single-particle imaging with x-ray lasers
journal, May 2019

  • Bielecki, Johan; Hantke, Max F.; Daurer, Benedikt J.
  • Science Advances, Vol. 5, Issue 5
  • DOI: 10.1126/sciadv.aav8801

A comprehensive simulation framework for imaging single particles and biomolecules at the European X-ray Free-Electron Laser
text, January 2016

  • Yoon, Chun Hong; Yurkov, Mikhail; Schneidmiller, Evgeny Alexanrdovich
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2016-01805

Calculation of x-ray scattering patterns from nanocrystals at high x-ray intensity
text, January 2016

  • Abdullah, Malik Muhammad; Jurek, Zoltan; Son, Sang-Kil
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2016-02618

Biological single-particle imaging using XFELs – towards the next resolution revolution
text, January 2018


Atomic structure of granulin determined from native nanocrystalline granulovirus using an X-ray free-electron laser
journal, February 2017

  • Gati, Cornelius; Oberthuer, Dominik; Yefanov, Oleksandr
  • Proceedings of the National Academy of Sciences, Vol. 114, Issue 9
  • DOI: 10.1073/pnas.1609243114

Evaluation of the performance of classification algorithms for XFEL single-particle imaging data
text, January 2019


Femtosecond bond breaking and charge dynamics in ultracharged amino acids
text, January 2019

  • Grånäs, Oscar; Timneanu, Nicusor; Eliah Dawod, Ibrahim
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2020-00147

Quantitative ptychographic bio-imaging in the water window
journal, January 2018

  • Rose, Max; Senkbeil, Tobias; von Gundlach, Andreas R.
  • Optics Express, Vol. 26, Issue 2
  • DOI: 10.1364/oe.26.001237

Quantitative ptychographic bio-imaging in the water window
text, January 2018

  • Rose, Max; Senkbeil, Tobias; Von Gundlach, Andreas
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2018-00468

Evaluation of the performance of classification algorithms for XFEL single-particle imaging data
text, January 2019


Quantum imaging with incoherently scattered light from a free-electron laser
journal, October 2017

  • Schneider, Raimund; Mehringer, Thomas; Mercurio, Giuseppe
  • Nature Physics, Vol. 14, Issue 2
  • DOI: 10.1038/nphys4301

Design of a liquid cell toward three-dimensional imaging of unidirectionally-aligned particles in solution using X-ray free-electron lasers
journal, January 2020

  • Suzuki, Akihiro; Kimura, Takashi; Yang, Ying
  • Physical Chemistry Chemical Physics, Vol. 22, Issue 5
  • DOI: 10.1039/c9cp03658j

Is radiation damage the limiting factor in high-resolution single particle imaging with X-ray free-electron lasers?
journal, July 2019

  • Östlin, C.; Timneanu, N.; Caleman, C.
  • Structural Dynamics, Vol. 6, Issue 4
  • DOI: 10.1063/1.5098309

Femtosecond bond breaking and charge dynamics in ultracharged amino acids
journal, October 2019

  • Grånäs, Oscar; Timneanu, Nicusor; Eliah Dawod, Ibrahim
  • The Journal of Chemical Physics, Vol. 151, Issue 14
  • DOI: 10.1063/1.5116814

High-Power Femtosecond Soft X Rays from Fresh-Slice Multistage Free-Electron Lasers
journal, June 2018


Design of the mirror optical systems for coherent diffractive imaging at the SPB/SFX instrument of the European XFEL
journal, June 2016


Low-signal limit of X-ray single particle diffractive imaging
text, January 2019

  • Ayyer, Kartik; Morgan, Andrew J.; Aquila, Andrew
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-05177

Software Platform for European XFEL: Towards Online Experimental Data Analysis
text, January 2018

  • Bobkov, S. A.; Teslyuk, A. B.; Zolotarev, S. I.
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-00311

Reversible rearrangement of magnetic nanoparticles in solution studied using time-resolved SAXS method
text, January 2019


Coherent soft X-ray diffraction imaging of coliphage PR772 at the Linac coherent light source
journal, June 2017

  • Reddy, Hemanth K. N.; Yoon, Chun Hong; Aquila, Andrew
  • Scientific Data, Vol. 4, Issue 1
  • DOI: 10.1038/sdata.2017.79

Mask-based approach to phasing of single-particle diffraction data. II. Likelihood-based selection criteria
journal, January 2019

  • Lunin, Vladimir Y.; Lunina, Natalia L.; Petrova, Tatiana E.
  • Acta Crystallographica Section D Structural Biology, Vol. 75, Issue 1
  • DOI: 10.1107/s2059798318016959

Wavefront sensing at X-ray free-electron lasers
text, January 2019

  • Seaberg, Matthew; Cojocaru, Ruxandra; Berujon, Sebastien
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-02574

Single Particle Study by X-Ray Diffraction: Crystallographic Approach
journal, November 2019

  • Lunin, V. Y.; Lunina, N. L.; Petrova, T. E.
  • Mathematical Biology and Bioinformatics, Vol. 14, Issue S
  • DOI: 10.17537/2019.14.t44

On the characterization of a 1 m long, ultra-precise KB-focusing mirror pair for European XFEL by means of slope measuring deflectometry
journal, February 2019

  • Siewert, F.; Buchheim, J.; Gwalt, G.
  • Review of Scientific Instruments, Vol. 90, Issue 2
  • DOI: 10.1063/1.5065473

Is radiation damage the limiting factor in high-resolution single particle imaging with X-ray free-electron lasers?
text, January 2019


Single Particle Study by X-Ray Diffraction: Crystallographic Approach
journal, November 2019

  • Lunin, V. Y.; Lunina, N. L.; Petrova, T. E.
  • Mathematical Biology and Bioinformatics, Vol. 14, Issue 2
  • DOI: 10.17537/2019.14.500

X-ray microscopy
journal, July 1965


The Single Particles, Clusters and Biomolecules and Serial Femtosecond Crystallography instrument of the European XFEL: initial installation
text, January 2019

  • Mancuso, Adrian P.; Aquila, Andrew; Batchelor, Lewis
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-01957

Diffraction data of core-shell nanoparticles from an X-ray free electron laser
journal, April 2017

  • Li, Xuanxuan; Chiu, Chun-Ya; Wang, Hsiang-Ju
  • Scientific Data, Vol. 4, Issue 1
  • DOI: 10.1038/sdata.2017.48

Femtosecond and nanometre visualization of structural dynamics in superheated nanoparticles
journal, January 2016


Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source
text, January 2016

  • Munke, Anna; Andreasson, Jakob; Aquila, Andrew
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2016-02771

Single-particle imaging without symmetry constraints at an X-ray free-electron laser
text, January 2018

  • Rose, Max; Bobkov, Sergey; Ayyer, Kartik
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2018-03083

Reversible rearrangement of magnetic nanoparticles in solution studied using time-resolved SAXS method
journal, June 2019


Theoretical evidence for the sensitivity of charge-rearrangement-enhanced x-ray ionization to molecular size
text, January 2019

  • Hao, Yajiang; Inhester, Ludger; Son, Sang-Kil
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-02638

Transient lattice contraction in the solid-to-plasma transition
text, January 2016


Incoherent Diffractive Imaging via Intensity Correlations of Hard X Rays
text, January 2017

  • Classen, Anton; Ayyer, Kartik; Chapman, Henry N.
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2017-08794

Coherent diffractive imaging of microtubules using an X-ray laser
journal, June 2019


Wavefront sensing at X-ray free-electron lasers
journal, June 2019

  • Seaberg, Matthew; Cojocaru, Ruxandra; Berujon, Sebastien
  • Journal of Synchrotron Radiation, Vol. 26, Issue 4
  • DOI: 10.1107/s1600577519005721

Reproducibility of single protein explosions induced by X-ray lasers
journal, January 2018

  • Östlin, Christofer; Tîmneanu, Nicusor; Jönsson, H. Olof
  • Physical Chemistry Chemical Physics, Vol. 20, Issue 18
  • DOI: 10.1039/c7cp07267h

Incoherent Diffractive Imaging via Intensity Correlations of Hard X Rays
text, January 2017

  • Classen, Anton; Ayyer, Kartik; Chapman, Henry N.
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2017-12921

Wavefront sensing at X-ray free-electron lasers
text, January 2019


Software Platform for European XFEL: Towards Online Experimental Data Analysis
journal, November 2018

  • Bobkov, S. A.; Teslyuk, A. B.; Zolotarev, S. I.
  • Lobachevskii Journal of Mathematics, Vol. 39, Issue 9
  • DOI: 10.1134/s1995080218090093

Coherent diffractive imaging of microtubules using an X-ray laser
text, January 2019

  • Brändén, Gisela; Hammarin, Greger; Harimoorthy, Rajiv
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-03073

Incoherent Diffractive Imaging via Intensity Correlations of hard X-rays
text, January 2017


Using convex optimization of autocorrelation with constrained support and windowing for improved phase retrieval accuracy
journal, January 2018


Single-particle structure determination by X-ray free-electron lasers: Possibilities and challenges
journal, July 2015

  • Hosseinizadeh, A.; Dashti, A.; Schwander, P.
  • Structural Dynamics, Vol. 2, Issue 4
  • DOI: 10.1063/1.4919740

Reproducibility of single protein explosions induced by X-ray lasers
text, January 2018

  • Östlin, Christofer; Tîmneanu, Nicusor; Jönsson, H. Olof
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-00083

Transient lattice contraction in the solid-to-plasma transition
journal, January 2016

  • Ferguson, Ken R.; Bucher, Maximilian; Gorkhover, Tais
  • Science Advances, Vol. 2, Issue 1
  • DOI: 10.1126/sciadv.1500837

Theoretical evidence for the sensitivity of charge-rearrangement-enhanced x-ray ionization to molecular size
journal, July 2019


Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source
journal, August 2016

  • Munke, Anna; Andreasson, Jakob; Aquila, Andrew
  • Scientific Data, Vol. 3, Issue 1
  • DOI: 10.1038/sdata.2016.64

Simulations of ultrafast x–ray laser experiments
conference, June 2017

  • Fortmann-Grote, C.; Andreev, A. A.; Appel, K.
  • SPIE Optics + Optoelectronics, SPIE Proceedings
  • DOI: 10.1117/12.2270552

Single-particle XFEL 3D reconstruction of ribosome-size particles based on Fourier slice matching: requirements to reach subnanometer resolution
journal, May 2018

  • Nakano, Miki; Miyashita, Osamu; Jonic, Slavica
  • Journal of Synchrotron Radiation, Vol. 25, Issue 4
  • DOI: 10.1107/s1600577518005568

The role of transient resonances for ultra-fast imaging of single sucrose nanoclusters
journal, January 2020


Determining Complex Structures using Docking Method with Single Particle Scattering Data
journal, April 2017


Calculation of x-ray scattering patterns from nanocrystals at high x-ray intensity
journal, July 2016

  • Abdullah, Malik Muhammad; Jurek, Zoltan; Son, Sang-Kil
  • Structural Dynamics, Vol. 3, Issue 5
  • DOI: 10.1063/1.4958887

X-ray microscopy
journal, February 2017


Experimental 3D coherent diffractive imaging from photon-sparse random projections
text, January 2019

  • Giewekemeyer, K.; Aquila, A.; Loh, N. -T. D.
  • Deutsches Elektronen-Synchrotron, DESY, Hamburg
  • DOI: 10.3204/pubdb-2019-02014

The role of transient resonances for ultra-fast imaging of single sucrose nanoclusters
journal, January 2020


Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source
journal, August 2016

  • Munke, Anna; Andreasson, Jakob; Aquila, Andrew
  • Scientific Data, Vol. 3, Issue 1
  • DOI: 10.1038/sdata.2016.64

A comprehensive simulation framework for imaging single particles and biomolecules at the European X-ray Free-Electron Laser
journal, April 2016

  • Yoon, Chun Hong; Yurkov, Mikhail V.; Schneidmiller, Evgeny A.
  • Scientific Reports, Vol. 6, Issue 1
  • DOI: 10.1038/srep24791

Single-particle structure determination by X-ray free-electron lasers: Possibilities and challenges
journal, July 2015

  • Hosseinizadeh, A.; Dashti, A.; Schwander, P.
  • Structural Dynamics, Vol. 2, Issue 4
  • DOI: 10.1063/1.4919740

Preface for Special Issue on Biology with X-ray Lasers 2
journal, July 2015


Parameter optimization for 3D-reconstruction from XFEL diffraction patterns based on Fourier slice matching
journal, January 2019


Is radiation damage the limiting factor in high-resolution single particle imaging with X-ray free-electron lasers?
text, January 2019


Determining Complex Structures using Docking Method with Single Particle Scattering Data
journal, April 2017


Role of Computational Methods in Going beyond X-ray Crystallography to Explore Protein Structure and Dynamics
journal, October 2018

  • Srivastava, Ashutosh; Nagai, Tetsuro; Srivastava, Arpita
  • International Journal of Molecular Sciences, Vol. 19, Issue 11
  • DOI: 10.3390/ijms19113401

Macromolecular Nanocrystal Structural Analysis with Electron and X-Rays: A Comparative Review
journal, September 2019


Calculation of x-ray scattering patterns from nanocrystals at high x-ray intensity
text, January 2016


Ptychographic wavefront characterisation for single-particle imaging at X-ray lasers
preprint, January 2020