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Title: A hybrid pore-scale and continuum-scale model for solute diffusion, reaction, and biofilm development in porous media

Authors:
 [1];  [1];  [2]
  1. Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Champaign Illinois USA
  2. Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Champaign Illinois USA, Department of Civil, Architectural, and Environmental Engineering, University of Texas at Austin, Austin Texas USA
Publication Date:
Sponsoring Org.:
USDOE
OSTI Identifier:
1402156
Grant/Contract Number:  
SC0006771
Resource Type:
Publisher's Accepted Manuscript
Journal Name:
Water Resources Research
Additional Journal Information:
Journal Name: Water Resources Research Journal Volume: 51 Journal Issue: 3; Journal ID: ISSN 0043-1397
Publisher:
American Geophysical Union (AGU)
Country of Publication:
United States
Language:
English

Citation Formats

Tang, Youneng, Valocchi, Albert J., and Werth, Charles J. A hybrid pore-scale and continuum-scale model for solute diffusion, reaction, and biofilm development in porous media. United States: N. p., 2015. Web. doi:10.1002/2014WR016322.
Tang, Youneng, Valocchi, Albert J., & Werth, Charles J. A hybrid pore-scale and continuum-scale model for solute diffusion, reaction, and biofilm development in porous media. United States. doi:10.1002/2014WR016322.
Tang, Youneng, Valocchi, Albert J., and Werth, Charles J. Tue . "A hybrid pore-scale and continuum-scale model for solute diffusion, reaction, and biofilm development in porous media". United States. doi:10.1002/2014WR016322.
@article{osti_1402156,
title = {A hybrid pore-scale and continuum-scale model for solute diffusion, reaction, and biofilm development in porous media},
author = {Tang, Youneng and Valocchi, Albert J. and Werth, Charles J.},
abstractNote = {},
doi = {10.1002/2014WR016322},
journal = {Water Resources Research},
number = 3,
volume = 51,
place = {United States},
year = {2015},
month = {3}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
DOI: 10.1002/2014WR016322

Citation Metrics:
Cited by: 17 works
Citation information provided by
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Works referenced in this record:

Effect of diffusive and convective substrate transport on biofilm structure formation: A two-dimensional modeling study
journal, January 2000


Macrotransport of a Biologically Reacting Solute Through Porous Media
journal, February 1996

  • Dykaar, Bruce B.; Kitanidis, Peter K.
  • Water Resources Research, Vol. 32, Issue 2
  • DOI: 10.1029/95WR03241

Effects of compound-specific transverse mixing on steady-state reactive plumes: Insights from pore-scale simulations and Darcy-scale experiments
journal, April 2013


Hybrid models of reactive transport in porous and fractured media
journal, September 2011


Simulations of two-dimensional modeling of biomass aggregate growth in network models
journal, December 2001

  • Dupin, Hubert J.; Kitanidis, Peter K.; McCarty, Perry L.
  • Water Resources Research, Vol. 37, Issue 12
  • DOI: 10.1029/2001WR000310

An improved pore-scale biofilm model and comparison with a microfluidic flow cell experiment: A PORE-SCALE BIOFILM MODEL AND COMPARISON WITH AN EXPERIMENT
journal, December 2013

  • Tang, Youneng; Valocchi, Albert J.; Werth, Charles J.
  • Water Resources Research, Vol. 49, Issue 12
  • DOI: 10.1002/2013WR013843

Mixing-induced precipitation: Experimental study and multiscale numerical analysis: MIXING-INDUCED PRECIPITATION
journal, June 2008

  • Tartakovsky, A. M.; Redden, G.; Lichtner, P. C.
  • Water Resources Research, Vol. 44, Issue 6
  • DOI: 10.1029/2006WR005725

Depth-averaging errors in reactive transport modeling: TECHNICAL NOTE
journal, February 2009


Pore-Scale Model for Reactive Transport and Biomass Growth
journal, January 2009

  • Tartakovsky, Alexandre M.; Scheibe, Timothy D.; Meakin, Paul
  • Journal of Porous Media, Vol. 12, Issue 5
  • DOI: 10.1615/JPorMedia.v12.i5.30

Mortar coupling and upscaling of pore-scale models
journal, September 2007

  • Balhoff, Matthew T.; Thomas, Sunil G.; Wheeler, Mary F.
  • Computational Geosciences, Vol. 12, Issue 1
  • DOI: 10.1007/s10596-007-9058-6

Multiblock Pore-Scale Modeling and Upscaling of Reactive Transport: Application to Carbon Sequestration
journal, August 2012


Spatial, sources and risk assessment of heavy metal contamination of urban soils in typical regions of Shenyang, China
journal, February 2010


Modeling non-equilibrium mass transport in biologically reactive porous media
journal, September 2010


Two-dimensional concentration distribution for mixing-controlled bioreactive transport in steady state
journal, June 2007


Biofilms in porous media: Development of macroscopic transport equations via volume averaging with closure for local mass equilibrium conditions
journal, March 2009


An Analysis Platform for Multiscale Hydrogeologic Modeling with Emphasis on Hybrid Multiscale Methods
journal, March 2014

  • Scheibe, Timothy D.; Murphy, Ellyn M.; Chen, Xingyuan
  • Groundwater, Vol. 53, Issue 1
  • DOI: 10.1111/gwat.12179

Pore to continuum upscaling of permeability in heterogeneous porous media using mortars
journal, January 2012

  • Sun, Tie; Mehmani, Yashar; Bhagmane, Jaideep
  • International Journal of Oil, Gas and Coal Technology, Vol. 5, Issue 2/3
  • DOI: 10.1504/IJOGCT.2012.046323

An improved cellular automaton method to model multispecies biofilms
journal, October 2013


Mixed Finite Element Methods on Nonmatching Multiblock Grids
journal, January 2000

  • Arbogast, Todd; Cowsar, Lawrence C.; Wheeler, Mary F.
  • SIAM Journal on Numerical Analysis, Vol. 37, Issue 4
  • DOI: 10.1137/S0036142996308447

Modeling of biomass-plug development and propagation in porous media
journal, February 2004


Homogenizability conditions for multicomponent reactive transport
journal, December 2013


Hybrid modeling of heterogeneous geochemical reactions in fractured porous media: HYBRID MODELS FOR FRACTURED AND POROUS MEDIA
journal, December 2013

  • Roubinet, Delphine; Tartakovsky, Daniel M.
  • Water Resources Research, Vol. 49, Issue 12
  • DOI: 10.1002/2013WR013999

Diffusion in Biofilms
journal, March 2003


Effects of Pore-Scale Heterogeneity and Transverse Mixing on Bacterial Growth in Porous Media
journal, April 2010

  • Zhang, Changyong; Kang, Qinjun; Wang, Xing
  • Environmental Science & Technology, Vol. 44, Issue 8
  • DOI: 10.1021/es903396h

Applicability regimes for macroscopic models of reactive transport in porous media
journal, March 2011


High-resolution monitoring of biogeochemical gradients in a tar oil-contaminated aquifer
journal, June 2008


Pore-Scale Analysis of Anaerobic Halorespiring Bacterial Growth along the Transverse Mixing Zone of an Etched Silicon Pore Network
journal, December 2003

  • Nambi, Indumathi M.; Werth, Charles J.; Sanford, Robert A.
  • Environmental Science & Technology, Vol. 37, Issue 24
  • DOI: 10.1021/es034271w

Pore network modelling to determine the transport properties in presence of a reactive fluid: From pore to reservoir scale
journal, March 2013


Hybrid Simulations of Reaction-Diffusion Systems in Porous Media
journal, January 2008

  • Tartakovsky, A. M.; Tartakovsky, D. M.; Scheibe, T. D.
  • SIAM Journal on Scientific Computing, Vol. 30, Issue 6
  • DOI: 10.1137/070691097

Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach
journal, April 1998


Equivalence between volume averaging and moments matching techniques for mass transport models in porous media
journal, October 2010


Hierarchical simulator of biofilm growth and dynamics in granular porous materials
journal, June 2007

  • Kapellos, George E.; Alexiou, Terpsichori S.; Payatakes, Alkiviades C.
  • Advances in Water Resources, Vol. 30, Issue 6-7
  • DOI: 10.1016/j.advwatres.2006.05.030

A dual-porosity theory for solute transport in biofilm-coated porous media
journal, December 2013


Hybrid Multiscale Modeling through Direct Substitution of Pore-Scale Models into Near-Well Reservoir Simulators
journal, August 2012

  • Sun, Tie; Mehmani, Yashar; Balhoff, Matthew T.
  • Energy & Fuels, Vol. 26, Issue 9
  • DOI: 10.1021/ef301003b

Evaluation of the Effects of Porous Media Structure on Mixing-Controlled Reactions Using Pore-Scale Modeling and Micromodel Experiments
journal, May 2008

  • Willingham, Thomas W.; Werth, Charles J.; Valocchi, Albert J.
  • Environmental Science & Technology, Vol. 42, Issue 9
  • DOI: 10.1021/es7022835

Pore-Scale Study of Transverse Mixing Induced CaCO 3 Precipitation and Permeability Reduction in a Model Subsurface Sedimentary System
journal, October 2010

  • Zhang, Changyong; Dehoff, Karl; Hess, Nancy
  • Environmental Science & Technology, Vol. 44, Issue 20
  • DOI: 10.1021/es1019788

Pore-scale simulation of biomass growth along the transverse mixing zone of a model two-dimensional porous medium: PORE-SCALE SIMULATION OF BIOMASS GROWTH
journal, July 2005

  • Knutson, C. E.; Werth, C. J.; Valocchi, A. J.
  • Water Resources Research, Vol. 41, Issue 7
  • DOI: 10.1029/2004WR003459

Biofilm development and the dynamics of preferential flow paths in porous media
journal, October 2013