Cooperative Subunit Refolding of a Light‐Harvesting Protein through a Self‐Chaperone Mechanism
Abstract
Abstract The fold of a protein is encoded by its amino acid sequence, but how complex multimeric proteins fold and assemble into functional quaternary structures remains unclear. Here we show that two structurally different phycobiliproteins refold and reassemble in a cooperative manner from their unfolded polypeptide subunits, without biological chaperones. Refolding was confirmed by ultrafast broadband transient absorption and two‐dimensional electronic spectroscopy to probe internal chromophores as a marker of quaternary structure. Our results demonstrate a cooperative, self‐chaperone refolding mechanism, whereby the β‐subunits independently refold, thereby templating the folding of the α‐subunits, which then chaperone the assembly of the native complex, quantitatively returning all coherences. Our results indicate that subunit self‐chaperoning is a robust mechanism for heteromeric protein folding and assembly that could also be applied in self‐assembled synthetic hierarchical systems.
- Authors:
-
- School of Chemistry the Australian Centre for NanoMedicine and the ARC Centre of Excellence in Convergent Bio-Nano Science and Technology The University of New South Wales Sydney 2052 NSW Australia, School of Physics The University of New South Wales Sydney 2052 NSW Australia
- Department of Chemistry Princeton University Princeton NJ 08544 USA
- School of Physics The University of New South Wales Sydney 2052 NSW Australia
- School of Chemistry the Australian Centre for NanoMedicine and the ARC Centre of Excellence in Convergent Bio-Nano Science and Technology The University of New South Wales Sydney 2052 NSW Australia
- Publication Date:
- Sponsoring Org.:
- USDOE
- OSTI Identifier:
- 1400819
- Resource Type:
- Publisher's Accepted Manuscript
- Journal Name:
- Angewandte Chemie
- Additional Journal Information:
- Journal Name: Angewandte Chemie Journal Volume: 129 Journal Issue: 29; Journal ID: ISSN 0044-8249
- Publisher:
- Wiley Blackwell (John Wiley & Sons)
- Country of Publication:
- Germany
- Language:
- English
Citation Formats
Laos, Alistair J., Dean, Jacob C., Toa, Zi S. D., Wilk, Krystyna E., Scholes, Gregory D., Curmi, Paul M. G., and Thordarson, Pall. Cooperative Subunit Refolding of a Light‐Harvesting Protein through a Self‐Chaperone Mechanism. Germany: N. p., 2017.
Web. doi:10.1002/ange.201607921.
Laos, Alistair J., Dean, Jacob C., Toa, Zi S. D., Wilk, Krystyna E., Scholes, Gregory D., Curmi, Paul M. G., & Thordarson, Pall. Cooperative Subunit Refolding of a Light‐Harvesting Protein through a Self‐Chaperone Mechanism. Germany. https://doi.org/10.1002/ange.201607921
Laos, Alistair J., Dean, Jacob C., Toa, Zi S. D., Wilk, Krystyna E., Scholes, Gregory D., Curmi, Paul M. G., and Thordarson, Pall. Thu .
"Cooperative Subunit Refolding of a Light‐Harvesting Protein through a Self‐Chaperone Mechanism". Germany. https://doi.org/10.1002/ange.201607921.
@article{osti_1400819,
title = {Cooperative Subunit Refolding of a Light‐Harvesting Protein through a Self‐Chaperone Mechanism},
author = {Laos, Alistair J. and Dean, Jacob C. and Toa, Zi S. D. and Wilk, Krystyna E. and Scholes, Gregory D. and Curmi, Paul M. G. and Thordarson, Pall},
abstractNote = {Abstract The fold of a protein is encoded by its amino acid sequence, but how complex multimeric proteins fold and assemble into functional quaternary structures remains unclear. Here we show that two structurally different phycobiliproteins refold and reassemble in a cooperative manner from their unfolded polypeptide subunits, without biological chaperones. Refolding was confirmed by ultrafast broadband transient absorption and two‐dimensional electronic spectroscopy to probe internal chromophores as a marker of quaternary structure. Our results demonstrate a cooperative, self‐chaperone refolding mechanism, whereby the β‐subunits independently refold, thereby templating the folding of the α‐subunits, which then chaperone the assembly of the native complex, quantitatively returning all coherences. Our results indicate that subunit self‐chaperoning is a robust mechanism for heteromeric protein folding and assembly that could also be applied in self‐assembled synthetic hierarchical systems.},
doi = {10.1002/ange.201607921},
journal = {Angewandte Chemie},
number = 29,
volume = 129,
place = {Germany},
year = {Thu Feb 09 00:00:00 EST 2017},
month = {Thu Feb 09 00:00:00 EST 2017}
}
https://doi.org/10.1002/ange.201607921
Works referenced in this record:
Cooperativity in macromolecular assembly
journal, July 2008
- Williamson, James R.
- Nature Chemical Biology, Vol. 4, Issue 8
Coherently wired light-harvesting in photosynthetic marine algae at ambient temperature
journal, February 2010
- Collini, Elisabetta; Wong, Cathy Y.; Wilk, Krystyna E.
- Nature, Vol. 463, Issue 7281
Structural Basis for the Self-Chaperoning Function of an RNA Collapsed State †
journal, December 2004
- Garcia, Ivelitza; Weeks, Kevin M.
- Biochemistry, Vol. 43, Issue 48
Developing a Structure–Function Model for the Cryptophyte Phycoerythrin 545 Using Ultrahigh Resolution Crystallography and Ultrafast Laser Spectroscopy
journal, November 2004
- Doust, Alexander B.; Marai, Christopher N. J.; Harrop, Stephen J.
- Journal of Molecular Biology, Vol. 344, Issue 1
Coherent Oscillations in the PC577 Cryptophyte Antenna Occur in the Excited Electronic State
journal, January 2014
- McClure, Scott D.; Turner, Daniel B.; Arpin, Paul C.
- The Journal of Physical Chemistry B, Vol. 118, Issue 5
Role of Small Subunit in Mediating Assembly of Red-type Form I Rubisco
journal, November 2014
- Joshi, Jidnyasa; Mueller-Cajar, Oliver; Tsai, Yi-Chin C.
- Journal of Biological Chemistry, Vol. 290, Issue 2
(Mg–ATP)-dependent self-assembly of molecular chaperone GroEL
journal, November 1990
- Lissin, N. M.; Venyaminov, S. Yu.; Girshovich, A. S.
- Nature, Vol. 348, Issue 6299
Principles of assembly reveal a periodic table of protein complexes
journal, December 2015
- Ahnert, S. E.; Marsh, J. A.; Hernandez, H.
- Science, Vol. 350, Issue 6266
Broadband Transient Absorption and Two-Dimensional Electronic Spectroscopy of Methylene Blue
journal, August 2015
- Dean, Jacob C.; Rafiq, Shahnawaz; Oblinsky, Daniel G.
- The Journal of Physical Chemistry A, Vol. 119, Issue 34
Structure, Dynamics, Assembly, and Evolution of Protein Complexes
journal, June 2015
- Marsh, Joseph A.; Teichmann, Sarah A.
- Annual Review of Biochemistry, Vol. 84, Issue 1
Translocation of a Phycoerythrin α Subunit across Five Biological Membranes
journal, August 2007
- Gould, Sven B.; Fan, Enguo; Hempel, Franziska
- Journal of Biological Chemistry, Vol. 282, Issue 41
The Levinthal paradox: yesterday and today
journal, June 1997
- Karplus, Martin
- Folding and Design, Vol. 2
Single-residue insertion switches the quaternary structure and exciton states of cryptophyte light-harvesting proteins
journal, June 2014
- Harrop, Stephen J.; Wilk, Krystyna E.; Dinshaw, Rayomond
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 26
Cooperativity and biological complexity
journal, August 2008
- Whitty, Adrian
- Nature Chemical Biology, Vol. 4, Issue 8
Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites
journal, March 2010
- Ragusa, Michael J.; Dancheck, Barbara; Critton, David A.
- Nature Structural & Molecular Biology, Vol. 17, Issue 4
Electronic coherence lineshapes reveal hidden excitonic correlations in photosynthetic light harvesting
journal, March 2012
- Wong, Cathy Y.; Alvey, Richard M.; Turner, Daniel B.
- Nature Chemistry, Vol. 4, Issue 5
Natural supramolecular protein assemblies
journal, January 2016
- Pieters, Bas J. G. E.; van Eldijk, Mark B.; Nolte, Roeland J. M.
- Chemical Society Reviews, Vol. 45, Issue 1
Opposing effects of folding and assembly chaperones on evolvability of Rubisco
journal, January 2015
- Durão, Paulo; Aigner, Harald; Nagy, Péter
- Nature Chemical Biology, Vol. 11, Issue 2
Lessons from nature about solar light harvesting
journal, September 2011
- Scholes, Gregory D.; Fleming, Graham R.; Olaya-Castro, Alexandra
- Nature Chemistry, Vol. 3, Issue 10
Shaping quaternary assemblies of water-soluble non-peptide helical foldamers by sequence manipulation
journal, September 2015
- Collie, Gavin W.; Pulka-Ziach, Karolina; Lombardo, Caterina M.
- Nature Chemistry, Vol. 7, Issue 11
From Levinthal to pathways to funnels
journal, January 1997
- Dill, Ken A.; Chan, Hue Sun
- Nature Structural & Molecular Biology, Vol. 4, Issue 1
Coupled chaperone action in folding and assembly of hexadecameric Rubisco
journal, January 2010
- Liu, Cuimin; Young, Anna L.; Starling-Windhof, Amanda
- Nature, Vol. 463, Issue 7278
Evolution of a light-harvesting protein by addition of new subunits and rearrangement of conserved elements: Crystal structure of a cryptophyte phycoerythrin at 1.63-A resolution
journal, August 1999
- Wilk, K. E.; Harrop, S. J.; Jankova, L.
- Proceedings of the National Academy of Sciences, Vol. 96, Issue 16
Principles that Govern the Folding of Protein Chains
journal, July 1973
- Anfinsen, C. B.
- Science, Vol. 181, Issue 4096
Models of cooperativity in protein folding
journal, April 1995
- Chan, Hue Sun; Bromberg, Sarina; Dill, Ken A.
- Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, Vol. 348, Issue 1323, p. 61-70