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Title: High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1 T Isolated from Great Boiling Spring, Nevada

Abstract

The draft genome of Thermocrinis jamiesonii GBS1T is 1,315,625 bp in 10 contigs and encodes 1,463 predicted genes. The presence of sox genes and various glycoside hydrolases and the absence of uptake NiFe hydrogenases (hyaB) are consistent with a requirement for thiosulfate and suggest the ability to use carbohydrate polymers.

Authors:
 [1];  [1];  [1];  [1];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2];  [2] more »;  [3];  [4] « less
+ Show Author Affiliations
  1. School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA
  2. Department of Energy Joint Genome Institute, Walnut Creek, California, USA
  3. Department of Biology, California State University, San Bernardino, California, USA
  4. School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA, Nevada Institute of Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, Nevada, USA
Publication Date:
Research Org.:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
OSTI Identifier:
1786440
Alternate Identifier(s):
OSTI ID: 1378989
Grant/Contract Number:  
AC02-05CH11231
Resource Type:
Published Article
Journal Name:
Genome Announcements
Additional Journal Information:
Journal Name: Genome Announcements Journal Volume: 4 Journal Issue: 5; Journal ID: ISSN 2169-8287
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Ganji, Rakesh, Murugapiran, Senthil K., Ong, John C., Manoharan, Namritha, Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Ngan, Chew Yee, Daum, Chris, Duffy, Kecia, Shapiro, Nicole, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Dodsworth, Jeremy A., and Hedlund, Brian P. High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1 T Isolated from Great Boiling Spring, Nevada. United States: N. p., 2016. Web. doi:10.1128/genomeA.01112-16.
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Ganji, Rakesh, Murugapiran, Senthil K., Ong, John C., Manoharan, Namritha, Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Ngan, Chew Yee, Daum, Chris, Duffy, Kecia, Shapiro, Nicole, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Dodsworth, Jeremy A., & Hedlund, Brian P. High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1 T Isolated from Great Boiling Spring, Nevada. United States. https://doi.org/10.1128/genomeA.01112-16
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Ganji, Rakesh, Murugapiran, Senthil K., Ong, John C., Manoharan, Namritha, Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Ngan, Chew Yee, Daum, Chris, Duffy, Kecia, Shapiro, Nicole, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Dodsworth, Jeremy A., and Hedlund, Brian P. Thu . "High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1 T Isolated from Great Boiling Spring, Nevada". United States. https://doi.org/10.1128/genomeA.01112-16.
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@article{osti_1786440,
title = {High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1 T Isolated from Great Boiling Spring, Nevada},
author = {Ganji, Rakesh and Murugapiran, Senthil K. and Ong, John C. and Manoharan, Namritha and Huntemann, Marcel and Clum, Alicia and Pillay, Manoj and Palaniappan, Krishnaveni and Varghese, Neha and Mikhailova, Natalia and Stamatis, Dimitrios and Reddy, T. B. K. and Ngan, Chew Yee and Daum, Chris and Duffy, Kecia and Shapiro, Nicole and Markowitz, Victor and Ivanova, Natalia and Kyrpides, Nikos and Woyke, Tanja and Dodsworth, Jeremy A. and Hedlund, Brian P.},
abstractNote = {The draft genome of Thermocrinis jamiesonii GBS1T is 1,315,625 bp in 10 contigs and encodes 1,463 predicted genes. The presence of sox genes and various glycoside hydrolases and the absence of uptake NiFe hydrogenases (hyaB) are consistent with a requirement for thiosulfate and suggest the ability to use carbohydrate polymers.},
doi = {10.1128/genomeA.01112-16},
journal = {Genome Announcements},
number = 5,
volume = 4,
place = {United States},
year = {Thu Oct 27 00:00:00 EDT 2016},
month = {Thu Oct 27 00:00:00 EDT 2016}
}
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Journal Article:
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Publisher's Version of Record
https://doi.org/10.1128/genomeA.01112-16
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